Salmo salar (Atlantic salmon): 106562783
Help
Entry
106562783 CDS
T04363
Symbol
neo1
Name
(RefSeq) neogenin 1
KO
K06766
neogenin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04350
TGF-beta signaling pathway
sasa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
106562783 (neo1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106562783 (neo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106562783 (neo1)
Cell adhesion molecules [BR:
sasa04515
]
Immunoglobulin superfamily
DCC/UNC5 family
106562783 (neo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
Tissue_fac
SusE
Sp38
V-set_CD47
EphA2_TM
Herpes_UL74
DUF4834
Motif
Other DBs
NCBI-GeneID:
106562783
NCBI-ProteinID:
XP_013983268
UniProt:
A0A1S3KXA0
LinkDB
All DBs
Position
ssa11:43006146..43264232
Genome browser
AA seq
1486 aa
AA seq
DB search
MAERGARLLLSLLCLTFLYPATTVSRHADKGTAARPFSPFWFSVEPWDTLAVRGAPALLN
CSAHSGDPASEPTAPQARVEWKKDGTFLSLAPDDGRRRVLPDGSLLISSVVHSKHNKPDE
GMYQCVATIDSLGTIASRTARLTVAGMPRFSSQPTAASIRLGDSQVLACDVNPDLVPLAR
WEREREPLELSSRLVQLPNGALVVSNASEADAGLYRCMVENAGPAKTSEEAQLTILPETG
EERELEFLVEPLPVTKVVGASLLLPCVVTGYPAPYVRWMVGDKLVEESEGKLELVGGGSL
LIYNLTEEDAGVYSCMADNTNNTIEAKAELTVQVPPEFLKRPANIYAHESMDIMFQCEVT
GSPAPTVKWVKNGDAVIPSDYFKIINEHNLQVLGLVKSDEGFYQCLAENDAGNVQSSAQL
IILEHDVALPTPPLPSLTPDTTDHVTPGSRGVANPTGPTPSAPRDVVASLVSTRFIKLTW
RPPAEPNGEDLTYSVYFNQEGTNRERILNTSRPGEMQVTIQNLMPDSKYKFRVVAHNKNG
LGESSAILKVATQGEVQVPGPAPNLQAVSTTPTSVTLSWDTPLTGNGDVLTYKVYYMEKG
LDLEQDIDAGALSYTLMGLKKFTEYSIRVVAFNKHGPGVSTGDITVTTLSDVPSAPPQNL
TVEVHNSKSIMVRWQPPPPGAQNGEITGYKIRYRKGTRKSEAAETTGGTQLFQLIDGLER
GTEYTFRVSAITVNGSGPATEWSTAETFESDLDESRVPDIPSSLHVRPLVNSIVVSWTPP
ENQDMVVRGYTIGYGIGSPHAQTIKVDYKQRYYSIENLDPSSHYVITLKAFNNVGEGIPV
YESAITRPHSDNPDVDLYELFHAPYTPVPDPTPMLPPVGVQASVLSHDTIKVTWADNSLP
KNQKITDARYYTVRWKTNIPANTKLKTANTTNLSHMVTGLKPNTLYEFSVMVTKGRRTST
WSMTAQGTTFETIPSSSPKDVTVVSKELKPRTIIVNWQPPSEANGKITGYIIYYSTDVNA
EVHDWVIEPVVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSEAVHFRTPKTESSDKM
ANDQASNLPVKPGSNQPPLDHGFGSPHGKPGITGSGDNHILVIVVIISVGAFTIIVVVVG
AFLCTRRTTSHQKKKRAASKSSNSSHKYKGNSKDLKPPDLWIHHERLELKPIDKSPEPNP
VMTDTPIPRTSQDINPVDPSLDNSLLQRRNSYRGHESEDSISALAGRRGMRPKMMMPFHT
QPPQPVISAHPIHSLDNHHHHYHTGSLASPTRSYLHHHQGSAHLRPHACATPISCLDMVG
STESVRNTPSTEPLPPQAQPPCQAEHQHPDPEGSYQGSTATDDEPSASGSYCSAGQPPTA
HVRPTHPLKSFAVPTNPAANFESPALPSTPLLTQTGPQLHSVKTASIGTLGRVRPPMPVT
VPSAPDVPETSKMLEDVDSSYEPDELTEEMAHLEDLMKDLNAITTA
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggagcaaggttgctcctctctctcctctgtctcacctttctttacccg
gcgaccaccgtgtcaagacatgccgacaaaggcacggcggcgcggcccttcagccccttc
tggttctcggtggagccgtgggacacactggccgtgagaggtgccccggcactgctcaac
tgctcagcgcacagcggggaccctgcctcggagcccactgcgccccaggcccgtgtggag
tggaagaaggatggaaccttcctgagcctggcgccagacgacgggcggcggcgtgttctc
cctgacggctcgctgctcatctctagcgtggtgcactccaagcacaacaagcccgacgag
ggaatgtaccagtgtgtggccaccatcgacagcctgggaaccattgccagccgcaccgcc
cgcctcaccgtggcaggtatgccccggttctccagccagccgacagcagccagcatacgc
ctgggagacagccaggttctggcgtgcgacgtcaacccagacctggtgcctttagcccgg
tgggagcgtgagcgtgagcccctggagctgagctctaggctggtgcagctacccaacgga
gccctggtggtgagcaacgcttcagaggccgacgctgggctctaccgctgcatggtggag
aacgctgggcccgccaagaccagtgaagaggcccagctcacaatactgccagaaaccgga
gaggagagagaactggagttcctggtagagccacttcctgtgaccaaagtggtgggggcc
agtttgctgctgccgtgtgtggtgacgggttacccagcgccctacgtccgatggatggtg
ggagacaagcttgtcgaggagagtgaggggaagttggagttggtgggaggaggcagtctg
ttgatctacaacctgactgaggaggatgcaggcgtctacagctgtatggcagacaacact
aacaacactatcgaggccaaggcagagctcactgtacaagttccaccggagttcctgaag
aggccggccaacatctacgcccacgagtccatggacatcatgttccagtgtgaggtcaca
ggctccccggcccccaccgtcaaatgggtcaaaaacggagacgccgtcattcccagcgac
tacttcaaaatcattaatgaacacaacctgcaggtgctgggtctggtcaagtctgacgag
ggcttctaccagtgtctggcagagaacgatgcagggaacgtgcagtccagcgctcagctc
atcatcctagagcacgatgtagccctccccacccctcccctcccctcactgactcctgac
actactgaccatgtaacgccaggctccagaggtgtggctaaccccactggccccactccc
tccgccccccgtgacgtcgtggcctcgctggtctccacccgcttcatcaagctcacctgg
cgccctccggctgagcccaacggagaagacctcacctactctgtctacttcaatcaggag
ggtaccaacagggagcgtatcctgaacaccagtcggccaggtgagatgcaggtgaccatt
cagaacctgatgcccgactccaagtacaagttccgggtggtggcacacaacaagaacggc
ctgggagagagctctgccatcctcaaggtggccacccagggtgaagtgcaggttcctggc
cccgcccccaacctccaggctgtgtcgaccacacccacctccgtcaccctcagctgggac
acgcccctcactggcaacggcgacgtcctcacctacaaggtctactacatggagaagggt
ctggacctggaacaggacatagacgctggagctctgtcctacaccttgatgggtctgaag
aagttcacagagtacagcatcagagtggtggccttcaacaagcacggcccgggagtgtcc
acaggagacatcaccgtcaccaccctgtctgatgttcccagtgcccctcctcaaaacctc
actgtggaagttcacaactcaaagagcatcatggtccggtggcagcccccgccaccaggc
gcccagaacggcgagatcactgggtataagatccgttaccggaaaggaacgcggaagagc
gaggcggcagaaaccacgggaggcacccagctcttccaactcattgacggtctggagcgg
gggacagagtacacgttcagagtgtcagccatcacagtgaacggctcagggcccgccaca
gagtggagcaccgcagagaccttcgagagcgacctggacgagtccagggtgccggacatc
cccagctcgctacatgtgcgcccgctggtcaacagcattgtagtgagctggacgccgccg
gagaaccaggacatggtggtacgaggctacaccatcggctacggcatcggcagcccccac
gcccagaccatcaaggtggactacaagcagcgctactacagcattgagaacctagacccc
agctcccactatgtgataaccttgaaggccttcaacaacgtgggggaggggatccctgta
tacgagagcgccatcaccaggccacacagtgataaccctgatgttgatttgtatgaactc
ttccatgctccatacacaccagtaccagaccccacccccatgctacctcccgtgggcgta
caggcctcggtgctcagccacgacaccatcaaggtgacctgggccgacaactctctgccc
aagaaccagaagatcacggacgcacgctactacacggtgcgctggaagaccaacatcccc
gccaacaccaagctcaagacggccaacaccaccaacctgagccacatggtgacgggcctg
aagcccaacacactctatgagttctctgtcatggtgaccaagggccggaggaccagcacc
tggagcatgacggcccagggaaccacctttgagaccattcccagctcgtcccccaaagat
gtgactgtggtgagcaaggagctgaaaccacgtaccatcatagtcaactggcagcccccc
tcagaggccaatgggaaaatcacaggctacataatctactacagtactgatgtgaatgcg
gaggtgcatgactgggtgatagagccggtggtgggcaacaggttgacccatcagatccag
gagctgactttggacaccacctactacttcaagatccaggcccgtaactccaagggcatg
ggcccaatgtcagaggccgtacacttccgcacccccaagactgaatcctctgacaaaatg
gctaatgaccaagcctccaatttgccagttaaaccaggaagtaaccaaccacctcttgac
catggctttgggtctccacacggaaaaccaggaattacaggaagtggggacaaccacatc
ctggtcatcgttgtcatcatctctgtgggagcgttcaccatcatcgtggtggttgtgggg
gccttcctctgcacacgacgcaccacctcccaccagaaaaagaagcgggcggcctccaag
tcgtccaacagctcccacaagtacaagggcaactccaaggacctgaagcctccagaccta
tggatccaccatgagcggctggagctcaagcccattgacaagtcccccgagcccaacccg
gtgatgactgacacccccatcccccgcacctcgcaggacatcaaccccgtggaccccagc
ctggacaacagcctgctgcagagacgaaactcttaccgaggccacgaatcagaagacagc
atatctgcactggcagggcgccgggggatgcggcctaaaatgatgatgcccttccatacg
cagcccccccagcctgtgattagcgctcaccccatccattcccttgataaccatcaccac
cattatcacacgggcagcctggcatccccgacacgcagctacctccatcaccaccagggc
agtgcccacctgcgcccgcacgcctgcgccacccccatctcctgtctagacatggtgggc
tccacagagtcggtgaggaacacccccagcacagagcccctcccgccccaggcccagccc
ccttgccaagccgagcaccagcacccggaccccgagggcagctaccaagggtccacggcc
actgacgatgagcccagcgccagcggcagctactgcagcgccggccagccccccaccgcc
cacgtgcgccccactcaccccctcaagagctttgccgtacccaccaaccccgctgccaac
ttcgagtcgcctgccctgcccagcacgccgctgcttactcagactgggccccagctccac
tcagtaaagacagcctccatcggcaccctgggcagggtacgcccccccatgccagtcacg
gtgcccagtgcgccagacgtgcccgagaccagcaagatgctggaggatgtagacagtagc
tacgagcctgatgagttgacagaggagatggcccacctagaggacctgatgaaggacctg
aacgctataaccacagcctga
DBGET
integrated database retrieval system