Salmo salar (Atlantic salmon): 106562830
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Entry
106562830 CDS
T04363
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03082
ATP-dependent chromatin remodeling
sasa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106562830
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106562830
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106562830
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106562830
03036 Chromosome and associated proteins [BR:
sasa03036
]
106562830
Protein phosphatases and associated proteins [BR:
sasa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106562830
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106562830
SWI/SNF complex
106562830
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106562830
PBAF complex
106562830
SWI/SNF complex
106562830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
106562830
NCBI-ProteinID:
XP_013983333
UniProt:
A0A1S3KXG3
LinkDB
All DBs
Position
ssa11:44929132..44948262
Genome browser
AA seq
370 aa
AA seq
DB search
MALSKTFGQKPIKLQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI
VASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRNSQWVPTLPNSS
HHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQAEVLVPIRLDMEIDGQK
LRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDSILDEQTD
QRVIIKLNIHVGNISLVDQFEWDMSERENSPETFALMLCSELGLGGEFVTTIAYSIRGQL
SWHQRTYAFRADFSENPLPTVEIAIRNTGDADTWCPLLETLTDAEMEKKIRDQDRNTRRM
RRLANTAPAW
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaagcaaaacctttggccagaagccgattaaattgcagctagagcaagatgga
gacttctacatggttggatcagaggttggaaactacctccgtatgttcaggggctctctg
tataaaaggtacccatcactctggaggaggttagccacagtagaggaaaggaagaagatt
gtagcatcatcacacgccacaagtgtgactctgctgaaggcgtccgaatgtgaagagatc
tttgaggggaatgatgagaagtacaaagcggtttccataagcacagagccaccggcgtac
ctcagggagcagaaggcaaagaggaacagccagtgggtccccacgctgcccaacagctcc
caccacctggatgctgtgccctgctccaccaccatcaatcgcaaccgaatgggccgcgac
aagaagaggaccttccccctgtgctttgacgaccacgacccggcggtgatccacgagaat
gcgtctcaggctgaggtgttggttcccattcgtctggacatggagattgacgggcagaag
ctccgagatgccttcacctggaacatgaatgagaagctgatgaccccggagatgtttgct
gagatcctgtgtgacgacctggacctgaaccccctggcctttgtcccggccatcgcctca
gctatccgccagcagatagagtcctaccccacagacagcatcctggacgagcagactgac
cagagggtcatcatcaagctgaacatccacgttgggaacatctccctagttgaccagttt
gagtgggacatgtcggagagggagaactctccggagacgtttgccctgatgctgtgctcc
gagctgggcctgggaggagagtttgttactaccattgcctacagcatccgtggccagctc
agctggcaccagaggacgtacgccttcagggctgatttcagtgagaaccccctgccaacg
gtggagattgccatccgcaacacaggcgacgctgacacatggtgccctctgctggagacc
ctgacagatgcagagatggagaagaagatcagggaccaggacaggaacaccaggcgcatg
agacgacttgccaacactgcccccgcctggtag
DBGET
integrated database retrieval system
