Salmo salar (Atlantic salmon): 106562832
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Entry
106562832 CDS
T04363
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1-like
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04210
Apoptosis
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
106562832
09142 Cell motility
04820 Cytoskeleton in muscle cells
106562832
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106562832
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
106562832
Intermediate filaments
Intermediate filament-binding proteins
106562832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
SCO1-SenC
Motif
Other DBs
NCBI-GeneID:
106562832
NCBI-ProteinID:
XP_013983337
UniProt:
A0A1S3KXD9
LinkDB
All DBs
Position
ssa11:complement(45083215..45157895)
Genome browser
AA seq
2509 aa
AA seq
DB search
MATMEIQDLGQQRETTRLPRETMATTSPQRMDTSGVKVLESADDIQERRQQVLDRYRRFK
ELSGVRRQKLEDSYRFQFFRRDADELEKWIQEKLQIASDENYKDPTNLQGKLQKHQAFEA
EVQANAGAIIKLDETGNLMIYEGHFASETIRTRLEELHRLWDLLLQKTKEKGVHLLQAQK
LVQYLRECEDALDWISDKEAMATSEELGQDLEHVEVLQKKFEEFQTDLAAHEERVNEVNQ
LAGKLIQESHPEAELIVRKQEEVNAAWQRLKGLAQQRQGRLFGAAEVQRFNRDVDETISW
IKEKEQLMASDDFGRDLASVQALLRKHEGLERDLAALEDKVNTLGGEAERLQQTHPQNAS
QIHLKRDELITNWEQIRTLAAERHAHLNDSYRLQRYTADFRDLTSWVTEMKALINADELA
NDVAGAEALLDRHQEHKGEIDAHEDSFKATDEAGQALLNTGHYALEEVKEKLGVLTEEKE
SLLELWEVRRQQYEQCMDLQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHE
DFEKSLSAQEEKITALDEFATKLIQNNHYAKEDVATRRDALLSRRNALHERAQSRRAALE
DSFHLQQFFRDSDELKSWINEKMKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDA
LQKSGQELLDGKHYAADEVSVRMDEVSSQWKKLLEATELKGIKLREANQQQQFNRNVEDI
ELWLYEVEGHLASDDYGKDLTSVQNLQKKHALLEADVAAHQDRIDGITIQARQFQEAGHF
DGDNIKRKQEALVARYDALRDPMAARKQKLSDSLRLQQLFRDVEDEETWVREKEPIAAST
NRGKDLIGVQNLLKKHQALQAEIAGHEPRIKAVTQKGEAMVEEGHFAGEEVKVKLGELNG
RWDTLKGKAGQRRQDLEDSLQAQQYFADANEAESWMREKEPIVGSPDYGKDEDSAEALLK
KHEALMSDLSAYGSSIQALKEQAQSCRQQVAPTDDETGKELVLALYDYQEKSPREVTMKK
GDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDPTQSSSRENLLDEQGSIGLRQDQIE
NQPGAKEACSVSVRMKQVEELYGTLLELGEKRKDMLEKSCKKFMLFREANELQQWINEKE
GALTNEEVGSDLEQVEVLQKKFDDFQKDLKANESRLRDINKVASELESEGLMAEEAHMVQ
AQEQVMVGSVPGKDDTDSKNASPWKNVRLAVQTTANFNTIKELNNRWRSLQQLAEERSNM
LGSAHEVQRFHRDADETKEWIEEKNQALNTDNYGHDLASVQALQRKHEGFERDLAALGDK
VKSLGETAERLIQSHPEAVDDIQEKCTELNMAWSSLVARADQRKDKLGNSHDLQRFLSDF
RDLMSWINGIRSLVSSEELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAR
GHYASPEIQQKLEALDHERADLEKAWVQRRMMLDQCLELQLFNRDCEQAENWMAAREAFL
ASDDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQSFADQLVGADHYAKPEIFKRRNE
VLDRWRRLKAQMIEKRSKLGESQTLQQFSRDVDEIEAWISEKLQTATDESYKDPTNIQLS
KLLSKHQKHQAFEAELHANAERIRGVIDTGNALIQRGACAGSEDAVQSRLGALDEQWQFL
VNKSAEKSQKLKEANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLL
EADISAHEDRLKDLNGQADSLTASTAFDPTQVKDKRNAVNGRFAKIKSMAAGRRAKLNES
HRLHQFFRDLDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELGAHEPAIQSV
QDTGKKLSDDNTIGQEEIEQRLGQFEEHWTELKDLAAARGQRLEESLEYQQFVANVEEEE
AWINEKLNLVGSEDYGDTLAAVQGLLKKHEAFETDFTVHRDRVNDVCSNGDELINKNNHH
VDSISAKMTSLRGKVSELERAAAMRKAKLDENSAFLQFNWKADVVESWIGEKENSLKTDD
YGRDLSSVQTLLTKQETFDAGLQAFQQEGITNITALKDQLLAAKHVQSKAIEARHAALMK
RWNQLLDNSQARKKKLLEAQDHFRKVEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSL
EEIRALRDAHEAFRSSLSSAQADFNQLAELDRQIKSYQVVSNPYTWFTMEALEETWRNLQ
KIIKERELELQKEQRRQEENDKLRQEFAQHANAFHQWLQETRTYLLDGSCMVEESGTLES
QLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMR
MQHNLEQQIQARNTTGVTEDALKEFSMMFKHFDKEKSGRLNHQEFKSCLRSLGYDLPMVE
EGEPDPEFESILDTVDPNRDGNVSLQEYMAFMISRETENVKSSEEIESAFRALSVDAKPY
VTKEELYQNLSKEQADYCISHMKPYLDSKGREMPSAFDFVEFTRSLFVN
NT seq
7530 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggaaatccaagacctagggcaacagcgggagacaacccgtctgcctagg
gagactatggccaccacctctcctcagagaatggataccagtggggtgaaagtgctggag
tctgccgatgacatccaggagcgccggcagcaggtgttggaccgctaccggcgcttcaag
gagctgtcgggtgtgcgccggcagaagctggaggactcgtaccgtttccagttctttcgc
cgcgatgccgatgagctggagaagtggatccaggagaagctgcagatcgcctccgatgag
aactacaaggaccctaccaacctccagggcaagctccagaaacaccaggccttcgaggca
gaggtgcaggccaacgctggggccatcatcaagcttgacgagactggcaacctcatgatc
tacgagggtcactttgcctctgaaaccatccgtactcgtctggaggagctgcaccgtctt
tgggacctgctgctgcagaagaccaaggagaaaggtgttcatctgctgcaggcccagaag
ctggtgcagtacctgcgcgagtgtgaggatgccctggactggattagtgacaaggaggcc
atggccacctcagaggagctgggccaggacttggagcatgtggaggtgctccagaagaag
tttgaggagtttcagacggacctggcagctcacgaggagcgtgtgaacgaagtgaaccag
ctagcgggcaagctgatccaggagtctcaccccgaggcggagctcatcgtccgtaagcag
gaggaggtgaacgctgcctggcagaggctcaagggcctggcgcagcagaggcagggcagg
ctgtttggagccgccgaggtgcagcgcttcaacagggatgtggacgagaccatcagctgg
atcaaggagaaggagcagctcatggcgtccgatgactttggccgggacctggccagcgtt
caggccctgctgcgcaagcacgagggcctggagagagacctggctgccctggaggacaag
gtcaacactttggggggagaggctgaacgtctgcagcagacccacccccagaacgcttcc
cagatccacctgaagagggacgagctcatcaccaactgggagcagatccgcacgctggcc
gctgagcgtcacgcccacctcaacgactcctacaggctgcagcgctacactgcagacttc
cgtgacctgaccagctgggtgacggagatgaaggccctgatcaacgctgacgagctggcc
aacgacgtggccggagccgaggctctcctcgaccgccaccaggagcacaagggtgagatt
gatgcccatgaggacagcttcaaagccacggacgaagccggtcaggccctgctcaacacc
ggacactacgcgttagaggaggtcaaggagaagctgggtgtcctgactgaagagaaggag
tctctgctggagctgtgggaggtgcgtaggcagcagtacgagcagtgcatggacctgcag
ctcttctacagggacacagagcaggtcgacaactggatgagcaagcaagaggctttcctt
ctgaacgaggaccttggtgactctcttgacagcgtggaggccttgcttaagaaacacgag
gactttgagaagtccctcagcgctcaggaggagaagatcactgccctggatgaatttgcc
accaaactgatccagaacaaccactatgccaaggaggatgttgctactcgtagagatgct
ctgctgagccgccgcaacgccctgcacgagcgtgctcagtcacgccgcgccgctctggag
gactccttccacctgcagcagttcttccgtgactcggacgaactcaagagctggatcaat
gagaagatgaagacggccaccgacgaagcctacaaggacccgtcaaacctgcagggcaag
gtccagaagcaccaggccttcgaggcggagctgtcagccaaccagagccgcatcgatgct
ctgcagaagtctggccaggagctcctagatgggaagcactacgccgccgacgaggtgtct
gtacgcatggacgaggtcagctcccagtggaagaagctgctggaggccaccgaactcaaa
ggcatcaagctgcgcgaggccaaccagcagcagcagttcaacagaaacgtggaggacatt
gagctgtggctgtatgaggtcgagggccacctggcttcagatgactacggcaaggatctg
accagcgtccagaacctgcagaagaagcatgccctgctggaggctgacgtggctgcccac
caggaccgcatcgatggcatcaccattcaggcgcgtcagttccaggaagccggtcacttt
gacggcgacaacatcaagcgcaagcaggaggcgctggtggcgcgctacgatgccctccgc
gaccccatggccgcccgcaagcagaagctgtcagactccctgcggctgcagcagctcttc
agggacgtggaggacgaggagacctgggtccgggagaaggagcccatcgccgcctctacc
aaccggggaaaagacctgatcggcgtccagaacttgctgaagaagcaccaggccctgcag
gcggagatcgccggccatgagccccgcatcaaggccgtcacccagaaaggagaggctatg
gtggaggaaggccactttgctggggaggaggttaaggtgaagctgggggagctgaacggc
cgctgggacacccttaaaggcaaggccggccagcgcaggcaggacctggaggactcgctg
caggcacagcagtacttcgccgatgctaacgaggcagagtcctggatgagggagaaagag
cccattgtgggcagtcccgactatggcaaggatgaggattcggctgaggccctgctgaag
aagcacgaagccctgatgtctgacctgagtgcttatggcagcagcatccaggctttgaag
gagcaggcccaatcctgcaggcaacaagttgcgcccaccgatgatgagactggcaaggag
ctggtgctggccctctatgactaccaggagaagagcccccgtgaggtcaccatgaagaag
ggagacatcctcaccctgctcaacagcaccaacaaggactggtggaaggtggaggtgaac
gaccgccagggctttgtgccagcggcctacgtcaagaagctagaccccacccagtcctcc
tccagggagaacctgctggacgagcagggcagcatcggcctccgccaggaccagatcgag
aaccagccgggcgcaaaggaggcgtgcagtgtgtctgtacgcatgaagcaggtggaggaa
ctgtacggcactctcctggagctgggcgagaaacgcaaggacatgctagaaaagagctgc
aagaagttcatgctgttccgcgaggctaacgaactgcagcagtggatcaacgagaaggag
ggagccctcaccaacgaggaggtgggctctgacctggagcaggtggaggtgctgcagaag
aagtttgacgacttccagaaggacctgaaggccaacgagtctcgtctgagggacatcaac
aaggtagcatctgagctggagtctgagggcctaatggcagaggaggcacacatggtccaa
gctcaggaacaagtaatggtgggttccgttcctggcaaggatgataccgattccaaaaat
gcttcaccatggaagaatgtacgcttggctgttcaaacgacggctaactttaatactatc
aaggagctgaacaaccgctggaggtccctacagcagctggctgaggagagaagcaacatg
ctggggagtgcccacgaggtgcagaggttccacagggatgcggatgagaccaaggagtgg
atcgaggagaagaaccaggccctgaacacagacaactacggccacgacctggctagcgtt
caggctctgcagcgcaaacatgagggctttgagagagacctggccgccttgggagacaag
gtgaagtctctgggggagacggcggagcgtctgatccagtcccatccggaggctgtggac
gacatccaggagaagtgcacagagctcaacatggcctggagcagcctagtggcgcgtgcc
gaccagcgcaaggacaagctgggcaactcccacgacctgcagcgcttcctctccgacttc
agggacctgatgtcctggattaacggcatccgaagcttggtctcctcagaggaactggcc
aaagatgtgaccggggctgaggccctgctggagagacaccaggagcaccgtactgagatc
gacgcccgtgcgggcactttccaggcctttgagcagtttggccagcagctgttggcacga
ggccactacgccagtccggagatccagcagaagctggaggccctggaccacgagagggcc
gacctggagaaggcctgggtccagaggcgcatgatgctcgaccagtgcctggagctccag
ctgttcaaccgtgactgtgagcaggctgagaattggatggcagcgcgcgaggccttcctg
gccagcgacgacaagggcgactccctggacagcgtggaggccctcatcaagaaacacgag
gactttgacaaggccatcaatgtgcaggaggagaagatcgctgccctgcagtcctttgct
gaccagctggttggtgctgaccactacgccaagcctgagatcttcaaacgtcgcaacgaa
gtcctggacaggtggcgccgtctgaaggcccagatgattgagaagcgttccaagctgggc
gagtcccagaccctgcagcagttcagccgtgatgtggatgagattgaggcctggatcagc
gagaagctgcagacggccaccgacgagtcctacaaggaccccaccaacatccagttgtcc
aagctgctgagtaagcaccagaagcaccaggccttcgaggcggagctgcacgccaacgca
gaacgcatccgtggggtcatcgacacaggaaacgccctcatccagagaggggcctgcgcc
ggcagtgaggacgcagttcagtcgcgtctcggtgccctggatgagcagtggcagttcctg
gtgaacaagtcagcagagaagagccagaagctcaaggaagccaacaagcagcagaacttc
aacactggcatcaaggactttgacttctggctatctgaggtcgaggcccttcttgcctct
gaggactatggcaaagacctggcctcagtcaacaacctgctgaagaaacaccagcttctg
gaagccgacatctctgctcatgaggatcgcctgaaggacctgaatggccaggccgacagc
ctgacggccagcacagccttcgaccccacccaggtcaaggacaagcgcaacgccgtcaac
ggacgcttcgccaagatcaagagcatggctgccggccgccgcgccaagctcaacgagtct
caccgcctgcaccagttcttcagggacctggacgatgaggagtcttggataaaagaaaag
aaattgctagtgagttcggaggactatggacgtgatttgacaggagtgcagaatctgagg
aagaaacacaagaggctggaggctgagctgggggcccacgagccagccatccagtctgtg
caggacactgggaagaagctgtctgatgacaacaccatcggccaggaggagattgagcag
aggctgggccagtttgaggagcactggacggagctgaaggacctggctgcagcaagggga
cagaggctggaggagtcgctggaataccagcagtttgttgcgaatgttgaagaggaggaa
gcctggattaacgagaagctgaatctggtgggaagcgaagactacggggataccctggcc
gcagtgcagggcctgttgaagaagcatgaggcgtttgagactgacttcaccgtgcacagg
gacagagtgaatgatgtgtgttccaacggagacgagctcatcaacaagaacaaccaccac
gtggacagcatctcagccaagatgacgtccctgcggggcaaggtgtctgagctggagagg
gccgctgccatgaggaaagccaagctggacgagaactctgccttcctgcagttcaactgg
aaggccgacgtggtggagtcctggatcggtgagaaggagaacagcctgaagactgatgac
tacggacgagatctctcctctgtgcagacgttgctcactaagcaggagacgtttgacgct
ggtcttcaggccttccagcaggagggcataaccaacatcacggccctcaaggaccagctg
ctggcggccaagcacgtccagtccaaggccattgaggcccgccacgccgccctcatgaag
cgctggaaccagctgctagacaactcacaggctcgcaagaagaagctgctggaggcccag
gatcacttcaggaaggtggaagacctgttcctgacctttgccaagaaggcatcggccttc
aatagctggtttgagaatgcagaggaggacctgacggacccggtgcgctgcaactcgctg
gaggagatccgggctctgcgcgatgcccacgaggccttccgctcgtcgctgagctcggcg
caggctgacttcaaccagctggctgagctggaccggcagattaagagttaccaggtggtg
tccaacccctatacctggttcaccatggaggccctggaggagacctggagaaacctgcag
aagatcatcaaggaacgagagctagagttgcagaaggagcagaggaggcaggaggagaac
gacaagctgcggcaggagtttgcgcagcatgccaacgcattccaccagtggctgcaggag
accaggacgtatcttctggatgggtcctgtatggtagaagagtccggaaccttggaatca
cagcttgaggcaaccaagcgtaagcaccaggagatccgggccatgcgcagccagctgaag
aagatagaggacttgggagcggccatggaggaagccctgatcctggacaacaagtacaca
gaacacagcacggtgggcctggcccagcagtgggaccagctagaccaactaggcatgagg
atgcagcacaacctggagcagcagatccaggccaggaacaccactggagtgacagaggat
gccctgaaggagttcagcatgatgttcaagcattttgacaaagagaagtctggccgttta
aaccatcaggagttcaagtcgtgtctgcgctcgctgggttacgacctgccaatggtggag
gagggagaaccagaccccgagtttgagtccatcctcgacacggtcgatcccaacagggat
ggcaacgtgtccttgcaggagtacatggctttcatgatcagccgcgaaacagagaacgta
aagtccagcgaggagattgagagcgccttccgagccctcagcgtcgatgccaagccctac
gtcaccaaggaggagctctaccagaacctgagcaaggaacaggcagactactgcatctcg
cacatgaagccctacctagacagcaagggccgggaaatgccctctgccttcgactttgtt
gaattcacccgctcgcttttcgtcaactga
DBGET
integrated database retrieval system
