Salmo salar (Atlantic salmon): 106563050
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Entry
106563050 CDS
T04363
Name
(RefSeq) nucleolysin TIA-1 isoform p40-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106563050
03041 Spliceosome [BR:
sasa03041
]
106563050
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
106563050
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106563050
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Motif
Other DBs
NCBI-GeneID:
106563050
NCBI-ProteinID:
XP_013983742
UniProt:
A0A1S3KYH3
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Position
ssa11:complement(57204756..57223973)
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AA seq
390 aa
AA seq
DB search
MMDDEQPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHA
AASLAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIKAAFAPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWASRKPPAPK
ATYETNTKHLSFEEVVNQSSPSNCTVYCGGVTAGLTEQLMRQTFTPFGQIMEIRVFPDKG
YSFVRFNSHEGAAHAIVSVNGTSIEGHVVKCYWGKETTDMVSPMQQVQVPQLTPQQNKIG
FAAQPYGQYAQWYGNAQQIGQYVPNGWQVPTYGVYGQAWNQQGFNHLQAGAGWTGVGAVS
NGGVVEPGQGVNGAVLANQSIMGTAGYHTH
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgaacaacccaagaccctgtatgtggggaacctgtcccgggatgtgacc
gaagccctcatcatgcagctgttcggccagatcggaccctgcaagagctgtaaaatgata
gtagatacggcaggtaatgacccctactgctttgtggagttctacgaacacaggcacgct
gccgcgtcactcgcagccatgaacggtcgtaaaataatgggtaaggaggtcaaagtcaac
tgggccacaacccctagcagccagaagaaagacacaagcaatcacttccacgttttcgtc
ggagacctcagtcctgaaatcaccacggatgacatcaaagctgcttttgccccctttggg
aggatatctgatgcccgggtggtgaaagacatggctactggcaagtctaaaggctatggc
tttgtgtctttcttcaacaaatgggatgcagagaatgccatccaacagatgggaggtcag
tggttgggaggacggcagatcaggaccaactgggccagcaggaagccccctgcgcccaaa
gccacctacgagacgaacacaaagcacctgtcgtttgaggaggtagtgaaccagtccagc
cccagcaactgtaccgtctactgtggaggagtcactgcagggcttacagaacaactgatg
aggcagaccttcacccccttcggtcagatcatggagatcagagttttcccagacaaaggc
tactcgtttgtgaggttcaactcccacgagggagcggcccacgccatagtgtcagtgaac
gggacgtccatagagggtcacgtggtgaagtgttactgggggaaggagaccacagacatg
gtcagccccatgcagcaggtacaggtgcctcagctaacaccgcagcagaacaaaattggc
tttgcagcgcagccctacggccaatatgcccagtggtacggtaatgcccagcagattggc
caatacgtgcccaacgggtggcaggtgccgacctacggagtctacggacaggcctggaac
cagcagggcttcaatcatttacaggcgggtgcagggtggacgggcgtgggagcggtcagt
aatggcggcgtggtggagcctggacagggagtcaacggggcggtgctggccaaccagtcc
atcatgggcaccgctggctaccacacccactga
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