Salmo salar (Atlantic salmon): 106563072
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Entry
106563072 CDS
T04363
Symbol
xrcc4
Name
(RefSeq) X-ray repair cross complementing 4
KO
K10886
DNA-repair protein XRCC4
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
106563072 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106563072 (xrcc4)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
106563072 (xrcc4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
XLF
PAXX
PigL_N
NET2A_C
IFP_35_N
FapA
Motif
Other DBs
NCBI-GeneID:
106563072
NCBI-ProteinID:
XP_013983770
UniProt:
A0A1S3KYW6
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All DBs
Position
ssa11:complement(55906918..55932489)
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AA seq
346 aa
AA seq
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MSIMTGPRCEMHVTVREVRISSDSETSYFLRVEWRGRDLGSGFLLLLTDGQNAWRGEVSE
DAVREEAEELEMQTDRYIQDLQQALTGTVASTDYSFTLTYNPGPMANMTLAYEKVQRDIS
FCLGSVLLGKIPEPVEEVRALLIHGLERGTALQNHNHLLKEENHRLKQELQHINAELQLF
VSGKETLESELYSRFTLVLNEKKAKIRSLQKNLTHLQETREEGESSSPGKGTKKTTGQTR
EEDEYEASTDEEQLQPASIEPTQGTSRSRSPLDNSLNDITDVAPSRKRRFRHLQPPDTVA
KRPTLEPAQKPRRDPLPSSRAAANKDQAPQHSTDAIPDAEDLFEDI
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagtataatgactggtccaaggtgtgagatgcatgtgactgtgcgtgaggtccgtatc
tcctcggattcagagacttcctacttcctgcgagtggagtggaggggtcgggacttaggc
tctggcttcctgttactgctcactgatggacagaacgcatggagaggagaggtatcagag
gatgcggtgagggaggaggctgaggagttggagatgcagacagatcgttacatccaggac
ctccagcaggccctgactgggactgtagcctctactgactacagcttcaccttgacctat
aaccccggcccaatggccaacatgaccctggcctacgagaaggtgcagagggacatctcg
ttctgcctgggctctgtgttgctgggtaagattccagagccagtggaggaggttagagcg
ttactcattcacggtctagaacgtggaaccgcactgcagaaccacaaccacttactaaag
gaggagaaccacagactcaaacaggagctacaacacatcaatgcagagttgcagctgttt
gtcagtgggaaggagacactcgagtcagagctgtactctcgcttcaccctggtgctgaat
gagaagaaggccaagatacgcagtctacagaagaacctcacacacctgcaggagaccagg
gaagagggagagagcagcagtccagggaagggaacgaaaaagacgacaggacagaccaga
gaggaggatgaatatgaagcgagcactgatgaagagcagttacagcctgcctctatagaa
cccacccaggggacgtcgcgtagccgcagcccattggacaacagtctgaatgacatcaca
gacgtggcgccctcccgtaaacggcgcttccgccacctgcaacctcctgacaccgttgct
aagagaccgaccttggagccagcgcagaaaccgaggagggaccccctgccatcatccaga
gcagcagccaataaggaccaggctccccagcattctactgatgccattcctgatgctgag
gacctgtttgaggacatctga
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