Salmo salar (Atlantic salmon): 106563134
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Entry
106563134 CDS
T04363
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04010
MAPK signaling pathway
sasa04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106563134
04020 Calcium signaling pathway
106563134
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106563134
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
106563134
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
106563134
NCBI-ProteinID:
XP_013983854
UniProt:
A0A1S3KZX8
LinkDB
All DBs
Position
ssa11:60470200..60689766
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AA seq
2449 aa
AA seq
DB search
MNGGLTQQYDAVLQLDERAASGGSCGKRNIIRTHAALNCTPWSKSKRMARFAEDLPTRYG
AGGGGRGAPGAGRGGARAGGPPGGQRMYKQSMAQRARTMAIYNPNPVKQNCFTVNRSLFI
FREDNLIRKYAKRITEWPPFEYLILATIIANCIVLALEQHLPASDKTPMSERLDDTEPYF
IGIFCFEGGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGSDFDLRTLRAVRVL
RPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGVEFYMGKFHSTCFTVD
TGERAAAFPCGTEAPARMCPNGTECTEYWIGPNYGITNFDNILFAVLTVFQCITMEGWVD
ILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKRQDFLKLRRQ
QQIERELTGYLEWICKAEEVLLAEEDENAEEKSPLDGAWYKRKQNLPVLKRGKVKKSKND
LIGAEEGEDHFTDMSSVVPPGSPFGRASVKSIKLDSSSYFRRKERRMRFFIRRMVKAQSF
YWTVLCLVGLNTLCVAIVHYDQPEWLTTALYLAEFVFLGLFLSEMSLKMYGLGARNYFHS
SFNCFDFGVIIGSILEVVWSMIKPGASYGISVLRALRLLRLFKFTKYWNSLRNLVVSLLN
SMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEEETPTTNFDTFPAAILTVFQILTGED
WNAVMYHGIESQGGVRRGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEK
QEEEANKKLALQKAMEVKEVSPMSAANISIAVFVKQNRDVLSRSSSVSSVHSPKDQQRAS
KMMSVWEQRTNQLRQNNLRASSEALFNELDPEERLRVSSALHLRPDMKTHNDRPLVVEPG
NGDKPPPPKEDRDGADTQQEGGDPHGPQLRKHHRHRERNGENGESRHHTHHSRSRDHYHP
DGPRPKEGKVERSHSREGGQGHRHHHQAGSPEEGVNGGGEEREHRHHHSHRQPREGNGAL
ANGARVERKGRGHKEGNGEGNGERRRYRSRMVRAQSTLDGEECRENGKRDGDRDQGHRAS
LDAQGESLATSPVQPPAGLQAGEKQEDADNQKNSHRASQAGLNSNTVHIPVTITAPPRET
TIIPMNNIDCESLPQNEEKKNLEEDEEELKNGPKHILPYSSMFVFGQTNPVRRLCHYVVN
LRYFEMCILSVITMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFTFEMVIKMIDLGLL
LHPGSYFRDLWNILDFIVVSGALVAFACSSFMGSQQSVARGTKGKDINTIKSLRVLRVLR
PLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKG
LEKDCRGKFLDYDRDDVAAQDREWRKYEFHYDNVLWAFLTLFTVSTGEGWPMVLKHSVDA
TYEDQGPSPGFRMETSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNER
ACIDFAINAKPLTRYMPADKQSFQYKMWKFVVSPPFEYSIMTMIALNTVVLMMKFHGAPE
LYEAMLKYLNIVFTALFTLECILKIIAFGPLNYLKAAWNVFDFVTVLGSITDILVTEIKT
DKLINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGM
QVFGNIELNEESAINHHNNFQTFFQALMLLFRSATGEAWHEIMLSCLSNRPCDKLSGSGG
KECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFIRVWAEY
DPAACGRMTYLDMYEMLRHMSPPLGLGKKCPPRIAYKRLVKMNMPIADDNTVHFTSTLMA
LIRTALEIKLASGVLAQRLCDADLRKEISRVWPNLPQKTVDLLVTPYKIDEFNELICPFA
VVNRELTVGKVYAALMIFDYYKQNRAKRLEQQLGLDFTGTIKNKKGAAFFRPMMPMTHMQ
EETPITTAKPPPPSQPEPQPEPPPATTSLTNGDTVPSPRSAMKESVSGDQLSQGGQRSST
SSRTLQRGQSEDVPYSIKPQESVEMRQVENGADLEGYFGLEGHGRAASMPRLDSQYYRNH
PRHLPGTYLAPIPDISPIRRSASTLASQRPQEVSLRDYTLERPSQAQAQSSSAPGQAQDR
PYHHHHHHRCHRRRDKDRDKKQKSLDRTSSVQPSSIAGLPADPAVEGLSRERARERDRGR
PQERRHHSAAGEKQRYYSCERYGGREHYHTKSAGPSRSTSPGETHDLGLFKQSIGMAKGS
QVVLTSAFGTPCRGRRQLPQTPLTPRPAVAYKTANSSPVQFGATGHKSSLSRGLSEHSAL
LESPAMPVTRIGSDPNLSPQPRGAPPRSLPEEPDDFQDAVSTHGGGGGRSPRTSASTSHG
ATEPSSAPAPQGRAGVPNGYHFTLGVNAGSSSSTRGTGSFREKEEDDWC
NT seq
7350 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtgggctgactcaacagtatgatgccgtcctgcaacttgacgagagagcagct
tcaggagggagttgtggcaagcgtaacatcattcgtacacacgcagccctcaattgtacg
ccatggtccaagtccaagagaatggctcgcttcgcagaagatctacccacccgctatgga
gctggaggaggaggcagaggtgcgccgggcgcaggcagagggggcgcccgagcaggtggt
cctccaggcggccaaaggatgtacaagcagtcgatggctcagagagccaggacaatggcc
atatacaaccctaacccagtcaaacagaactgcttcactgtcaaccgatccttgttcatc
tttcgagaggacaatctcattaggaaatatgctaagcgaataaccgaatggcctccgttt
gagtacttaatcctggccaccatcatcgccaactgcatcgtactggccctggagcagcac
ctaccagccagcgacaagacacccatgtcagaacgcctggatgacacagagccctacttt
attggaatattctgtttcgagggcggcattaagatcatcgccttgggctttgcattccac
aaaggctcatacctccgcaacggctggaacgtaatggactttgtggtcgtcctcactggg
atcctggctacggtgggctcagactttgacctgaggactctgcgggcggtgagagtactc
agacctctcaaactggtgtctggcatccccagtcttcaggtggtgttgaagtctatcatg
aaggccatggtgcctctgctccagataggcatgctgctcttcttcgccatactcatgttt
gccatcatcggagtggagttctacatgggcaagttccactccacctgcttcactgtcgac
actggtgagcgtgcggcagcgttcccctgtggtacagaggccccagccaggatgtgtcct
aacggtacagagtgtacagagtactggatcggccccaactatggcatcaccaactttgac
aacatcctgttcgccgtgctcaccgtcttccagtgcatcaccatggagggatgggtggac
atcctctacaacgccaatgatgcctcggggaacacctggaactggctctacttcatcccc
ctcatcatcatcggatcgttcttcatgctcaacttggtcctgggtgtcttatcaggggag
tttgccaaagagagagagcgtgtggagaagaggcaggactttctgaagctgcgcagacag
cagcagatagagagagagctgacggggtacctggagtggatatgcaaggcagaggaggtg
ctgctggcggaggaggatgagaatgcggaggagaagtcccctctggacggtgcgtggtac
aagaggaaacagaacctcccagtgttgaaacgaggcaaggtcaagaagagtaagaatgac
ctgatcggtgctgaggagggagaggatcactttactgacatgtcctctgttgtgccccca
ggctcaccgtttggccgggccagtgtgaagagcattaagctggacagctcatcctacttc
cgccgcaaggagaggagaatgcgtttcttcatccgtcgcatggtgaaagcccagagcttc
tactggacagtcctttgtctggtggggctcaacacactgtgtgtggccatcgtccactac
gaccagcctgagtggctcaccactgccctgtacctggcagagtttgtgttcctgggtctg
ttcctgtctgagatgagcctgaagatgtatggcctgggagccaggaactacttccattcc
tctttcaactgcttcgactttggtgtgataatagggagtatacttgaggtggtgtggtcg
atgatcaaaccaggggcatcctatggcattagtgtactgagggctcttcgtctgctcagg
ttattcaagtttaccaagtactggaactccctgaggaacctggtggtgtctctgctcaac
tccatgaagtccattatcagcttgctcttcctcctcttcctcttcattgtggtctttgct
ctgctgggcatgcagctctttggaggacagtttaatttcgaagaggagacgccgacgacc
aacttcgataccttcccggcggccattctcaccgtcttccagattctgactggcgaggat
tggaatgcagtaatgtatcatggcattgagtctcaggggggcgtgcggcggggaatgttc
tcatcggtctacttcatcgtcctcacactctttggaaactacactctcctgaacgtcttc
ttggctatcgccgtcgacaacctcgccaatgcacaggagctcaccaaggatgaggagaag
caggaggaagaagccaataagaagctggccctgcagaaggccatggaggtgaaggaggtc
agccccatgtcagcagccaacatctccatcgctgtttttgtaaagcaaaatcgagatgta
ctctctcgcagctcgtccgtctccagcgtacattcacctaaggatcagcagagagccagt
aagatgatgtcggtgtgggagcagcgcactaaccagctgcgtcaaaacaacttgagggcc
agctccgaggctctgttcaacgagctggacccagaggaacgcctgcgtgtctcctccgcc
ctccacctgcgccccgacatgaagacccacaacgaccgccccctagtggtggagccaggc
aacggggacaaaccaccaccccccaaggaggacagagacggagcagacacccagcaagag
gggggagacccccacggcccacaactccgcaagcaccaccgccaccgggagaggaatggg
gagaacggggagagcaggcatcacacccaccacagccgcagtagggaccactaccaccca
gacgggccccggcccaaagaaggaaaggtggagaggagccatagtcgagaggggggccag
ggccacaggcaccatcaccaggcggggtccccggaggaaggggtgaacggagggggggag
gagagggagcaccgccaccaccactcccacagacagccccgagaggggaacggggccctg
gctaacggggccagagtggagaggaagggccgggggcacaaggaggggaacggagagggg
aacggagagaggaggagataccgctcccgcatggtcagggcccagtcaactctggatggg
gaggagtgcagagagaacgggaagagagatggagacagggaccagggacacagagcttca
ctggacgctcaaggggagagcctggccaccagccctgtgcagcctcctgcaggtctacag
gctggagagaagcaagaggatgcagacaaccagaagaacagccacagagccagccaggca
ggcctcaacagcaacactgtccacatccctgtcaccatcaccgccccacccagagagacc
accatcatacccatgaataacatagactgtgagagcctcccccagaacgaggagaagaag
aacttagaggaggatgaggaggagctgaagaacggccccaaacacattctaccctacagc
tccatgtttgtgttcgggcagaccaacccggtgcgtcggctgtgccactatgtagtgaac
ctgcgttactttgagatgtgtatcctgtcggtcatcaccatgagcagcatagccctggcc
gctgaagaccctgtgcaggccaatgcaccccgcaataacgtgctcaaatatctggactac
gtcttcacgggagtgttcacctttgagatggtgattaagatgatagacctgggactgctc
ctccatcctggttcttacttccgcgacctgtggaacatcctggactttatcgtggtcagt
ggagcgctggtggccttcgcctgctcgagcttcatgggatcgcaacaaagcgtggccaga
ggaactaaaggcaaggacatcaacaccatcaagtccctcagggtgctgcgagtcctgagg
cccctgaagaccattaaacgactgcccaagctcaaggctgtgtttgactgcgtggtcaac
tctctgaagaacgtgctcaacatcctcattgtctacatgctcttcatgttcatcttcgct
gtgatcgctgtgcagctgttcaagggcaagttcttctactgcaccgacgagtctaaaggt
ctggagaaggactgcaggggtaagtttctggactatgaccgggatgacgtggctgctcag
gatcgtgagtggagaaagtacgagttccattatgataacgtgctgtgggccttcctcacc
ctcttcaccgtctccaccggggagggctggccaatggtcctaaagcattctgtggatgcc
acctatgaggaccagggtcccagcccaggcttccgtatggagacctctatcttctatgtg
gtctactttgtggtctttcccttcttctttgtcaacatctttgtggctctcatcatcatc
accttccaggaacagggagacaaggccatgtcagagtgtagtctggagaagaacgagaga
gcttgtattgactttgccatcaacgccaagcctctgacgcgctacatgccagcagacaag
cagtcgttccagtataagatgtggaagtttgtggtgtcgccgccctttgagtactccatc
atgaccatgattgcactcaacactgtggtgctgatgatgaagtttcacggtgctccggag
ctgtacgaggccatgctgaagtacctgaacatcgtgttcacagctctcttcacactggag
tgcatcctcaagatcatcgcttttggaccactgaattacctgaaggcagcctggaacgtg
tttgactttgtgacagttttggggagtatcacggacatcttggtcacagagattaagacg
gacaagctgatcaacctgagtttcctgaggcttttcagggcggccaggctcatcaagcta
ttgaggcagggctataccatccgcatcctgctgtggacctttgtccagtccttcaaggcc
ctaccttacgtctgcctcctcatcgctatgctcttcttcatctatgccatcatcggcatg
caggtgtttggaaacattgagctgaatgaggaatcggccatcaaccaccacaacaacttc
cagaccttcttccaggctctgatgcttctgttcaggagtgcaacaggcgaggcgtggcat
gagatcatgctgtcgtgtctgagtaaccgtccgtgtgataaactgtcagggtctggaggg
aaggagtgtggcagtgacttcgcttacttctactttgtctccttcatcttcctctgctcc
ttcctgatgctcaacctgtttgtggcggtcatcatggataactttgagtacctgaccaga
gacgcctccatcctggggcctcaccacctggacgaatttatccgcgtctgggccgagtac
gaccctgctgcctgtggccgtatgacctaccttgatatgtacgagatgctccgccacatg
tcccctccgctaggtttgggaaagaaatgcccgcccagaatcgcctataagcgattggtc
aagatgaacatgcccatcgccgatgacaatacggtgcactttacgtccacgctgatggct
ctcatccgcaccgctctggagatcaaactagcatctggggtgctggctcagcgcctgtgt
gatgctgatctgaggaaggagatctccagagtctggcctaacctgcctcagaagactgtt
gacctgctggtcacaccatataaaattgatgagttcaatgagctcatatgcccctttgcg
gttgtaaaccgagagctgacagtggggaaggtctatgctgccctcatgatctttgactac
tacaagcagaaccgggccaagagactggaacagcaactgggactggacttcacagggaca
attaagaataaaaagggtgcagccttcttccgccccatgatgcccatgacacatatgcag
gaggagacgccaatcaccactgccaagcccccgcccccttcacaaccagagcctcagcca
gagcccccgcccgccaccacctctctaaccaatggtgacacagtaccaagccctagaagt
gccatgaaagagtccgtatcaggagatcagctgtctcaggggggccagcggtccagcact
agcagtcggactctacagcggggccagtcagaggacgtgccatactccatcaaacctcag
gaatcagtggagatgaggcaggtggagaacggtgctgatttagagggctactttggtctg
gagggccatggcagagcagcctccatgcctagactggactcccagtactaccggaaccac
cctcgccacctacctgggacctacctggcacctatccctgacatcagtcctatcaggcgg
tcggcgtccacgttggcttcccagcgcccccaggaggtgagtctgagggactacaccctg
gagaggccgagccaagcccaggcccagtcgtcctcagccccaggccaggcccaggacagg
ccctaccaccatcaccaccaccaccgctgtcacagacgcagggacaaggacagggacaag
aagcagaagtcactcgacaggacatccagcgtgcagccttctagtatagcaggtttgcct
gctgaccctgccgtggagggcttgtccagggagcgggcgagggagcgtgaccgaggcagg
cctcaggagaggaggcatcactctgctgccggggagaagcagcgctactactcctgtgag
cgctacggaggcagggagcactaccacaccaagtcagccggcccgagccgctccacctcc
cctggagagacccacgacctaggcctcttcaagcagagtatcggcatggctaaaggcagc
caagtggtcttaacttcagcgttcggcacgccctgccgtgggcgcagacagctcccccag
acccccctcaccccccgccccgccgtggcctacaagaccgccaactcctcacctgtgcag
tttggtgccacggggcacaagtccagtctcagccgtggcctctcggagcatagcgccctg
ctggagtcacccgccatgcccgtcacccgcattggctcagaccccaacctgagcccccag
ccgcggggtgcccctccacgcagcctccctgaggagcctgatgacttccaggacgctgtg
agcacccatggagggggaggtggccgctcccccaggacctctgcctcaacatcccatggg
gctactgagccttcctctgcacctgccccacagggccgggctggggtcccaaatgggtac
cacttcactctgggggtcaatgccggttcgagttccagcaccagaggaactgggagcttc
cgggagaaggaagaggatgactggtgctag
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integrated database retrieval system
