Salmo salar (Atlantic salmon): 106563378
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Entry
106563378 CDS
T04363
Name
(RefSeq) PERQ amino acid-rich with GYF domain-containing protein 1-like
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106563378
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106563378
Surveillance factors
Other surveillance factors
106563378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
106563378
NCBI-ProteinID:
XP_013984356
UniProt:
A0A1S3L059
LinkDB
All DBs
Position
ssa11:73401781..73438273
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AA seq
1080 aa
AA seq
DB search
MTAETLNFGPECCLGEDNGRCISNLNLRLRALSRGRSVTSPPPSPALPKSKLADYRYGRE
EMLALYIKDDKPPEDITQDKEFAAILQDEPVQPLALEPLTEEEQRNFSMSVNSVAVLRLM
GKGGGAAPAAVAKGRGGGIRGRGRGEGAFYQRAPGGPDDGEVGFGRGREMLRSQSWDDRA
ERPRFEKPIRRAEVVRPGFEEAGPLGRKDSWRADSDNWRTLREEEEEAAAGGGGGEQPAW
RVAGTRRDDGGPRSAGWRDHGGRRKFEFDFRDSEGPRREDDRDGLPEWCTDEEDGEMGTF
DSSGAFMCIKKGSKGTITEEDLEFEALEEGKDNGQEGKDNSQEGKDNYKDNYTDRDECEA
ACEGVVKYRTPSPPAVSAPPSSDPLPAPCAPEAPLAPISHPSKTNHVHTEGSSPPGSGAQ
LSPDPPSSTTTSSGLMPPPSFGSLLPSTGGEVEEDEGMKHLQQEAEKMVASLQDTSLEEE
CFTQALQESHNITSQSHTHPAPHSHTHTAGHTHSHSAHRDCALPLSHEAAMKWFYKDPQA
EIQGPFSTVEMCEWFQAGYFSMTLLVKRGCDEGFQPLGDVIKMWGRVPFSPGPSPPPLLV
RQPPPPRGSSGNMDQELLKKQLEQAATAALYQQLQIRFQHMNRSGESSMMPSMNRSMSVP
DNGSMWDMRTSASQQSGGETNLWDLNISHSTQGPSLEQLHKLQDRREAELRAKREEEERK
RREEKRRQQEEQKRREEEELYRRKQQCRQQQELILKLLQQAQPGGPGCVSGSGSVWSGPQ
VSALSKQGKSLSLLELETERLLKQQSQHQRAQQQRDRHGGLSMGQWGEGSVGMWSGGGME
PKGSSGGMGVWEEAVKNQNSLRNMGMKNSRSSPSLSEQYMLRKKRTEEEDKLLKLLQGMK
PQDGFTTWCEQMLHALNTSANNSHSSSLDELFHCGASSGMQRPNPVATIVAYLKEVESPY
EVLDFIRSYLGDTVEAKEFAKQFLERRAKQKANHQRQQQQQQLSKEVPGLSVNNFPLQSM
FQAAQMGKGGMYDSQAAKMKKKQTMMLHSDPSILGVTVLSKSNNWKKKHRDIHSWAQGTG
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgaaacacttaacttcggcccagaatgttgtctaggggaagataatgggcga
tgcatatccaacttaaacttgaggctccgtgcactatccagagggcggagtgtgacgtcc
ccccctccctctccagcattgccaaagtccaagctggccgattaccgctatggtcgcgag
gagatgctagcactttatatcaaagatgacaagcccccagaggatatcacgcaggataag
gagtttgctgctatcctgcaggatgagcctgtgcagcctttggccctggagcctctaact
gaggaggagcagagaaacttctccatgtctgtgaacagtgtggctgtgctgaggttgatg
ggaaagggaggcggggccgcccctgcagctgtggccaagggtcgtggaggaggcatcaga
gggagaggaagaggtgaaggtgcattctaccaaagagctcctggaggtcctgatgatgga
gaggtgggctttggtcgtggccgagaaatgctccgcagccaaagctgggatgaccgagct
gagaggcccaggtttgagaagccaatcaggcgtgctgaggtagtgcgtccagggtttgag
gaggcggggcctcttggcaggaaggactcctggcgtgccgacagcgacaactggcgtacc
ctccgggaggaggaagaagaggcagcagcaggaggaggagggggagagcagccagcctgg
agagttgcaggaacccgccgtgatgatgggggtcctcggtctgcaggctggcgtgatcat
ggcggccggaggaagtttgagtttgacttccgtgacagcgagggcccccgcagggaggac
gacagggatggccttcctgagtggtgtacagatgaagaggatggagagatgggcaccttt
gactcctcgggggccttcatgtgcatcaagaaaggctccaagggcaccatcaccgaagag
gatctggagtttgaagctctagaggaaggcaaggacaacggtcaggaaggcaaggacaac
agtcaggaaggcaaggacaactataaggataactacactgacagagatgagtgtgaagca
gcatgtgagggggtggtcaagtacaggactccatctcctcctgctgtctcggcccctccc
tcctcagaccctctccctgccccttgtgccccagaggctcccctggcacccatctcccac
ccctccaaaaccaaccatgtgcatactgaaggcagctcacctccagggagtggtgctcag
ctcagtccagaccccccctcctccaccaccacttcctctggcctgatgcctcctccctcc
ttcggatctctcctcccatcaacagggggagaagtggaggaggacgagggcatgaagcac
ctacaacaggaggctgaaaagatggtggcatctttgcaggacacatcccttgaggaggag
tgtttcactcaagcactgcaggagagccacaacattacctcccaatctcacacacaccca
gccccacactcacacacacacaccgctggacacacacactcccactctgcccatagggac
tgtgccctgcccctctcccatgaggcagccatgaagtggttttacaaggacccccaggca
gagatccaaggtcccttctccacagtggagatgtgtgagtggttccaggcaggctacttc
tccatgaccctgctggtaaagcggggttgtgatgagggcttccagcccctgggtgacgtc
atcaagatgtgggggcgcgtgcccttctcccccggcccctcccccccacccctgctggtg
agacagcctccaccacctcgggggtcctctggcaatatggatcaggagctgctgaagaaa
cagttagaacaggcagccactgcagctctataccagcaattgcagataaggtttcagcac
atgaacaggagtggggaatcgagcatgatgccctcgatgaacaggtccatgtcagtacca
gataatgggtctatgtgggacatgcgtacctcagcctcccagcagtcaggaggtgagacc
aacctatgggacttaaacattagtcattccactcaggggccatctctggagcagctacac
aagctccaggaccggcgtgaggctgaactcagggccaagcgagaggaggaggagaggaag
cggcgggaggagaagaggaggcagcaggaggagcagaagaggcgtgaggaggaggagctg
tacaggcgtaagcagcagtgtcggcagcagcaggagctgatcctgaagctgctgcagcag
gcccagcccgggggcccagggtgtgtctctgggtcagggtccgtgtggagtggcccccag
gtctcagctctctccaagcaaggcaagagcctcagcctgctggagctggagaccgagagg
ctgctcaaacagcagtcccagcaccagagggcccagcagcagagggacaggcatggaggc
ctgtctatgggtcagtggggtgaggggtctgtgggcatgtggtctggtgggggcatggag
cccaaaggcagctctggaggtatgggtgtctgggaggaggctgtgaagaaccagaacagc
ctccgcaacatgggcatgaagaacagccgcagcagcccctctcttagcgagcagtacatg
ttgaggaagaagcgtacagaggaggaggacaaactgctgaagctgctgcagggcatgaaa
ccccaggacggcttcaccacctggtgtgaacagatgctgcacgcgctcaacacctccgct
aacaactcccactcctcgtccctggacgaactattccattgcggagcctccagtggcatg
cagaggccaaatccagtagccaccatcgtggcctatctgaaggaggtggagtctccctac
gaagtccttgactttatccgctcctacctgggcgacactgtggaagccaaagagtttgcc
aagcagttcctggagcggcgtgccaaacagaaagccaaccaccagagacagcagcagcaa
cagcagctatcaaaagaagttccaggactgtctgtgaacaactttcctctacagtccatg
ttccaggcagcccagatggggaagggaggaatgtatgacagccaggctgcaaagatgaag
aagaaacagaccatgatgcttcactccgaccccagcatcttaggtgttacggtcttatca
aagagtaataactggaagaagaagcacagggatattcattcctgggcgcaggggacagga
tga
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