Salmo salar (Atlantic salmon): 106563499
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Entry
106563499 CDS
T04363
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 4-like
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106563499
04990 Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
106563499
Cell adhesion molecules [BR:
sasa04515
]
Immunoglobulin superfamily
SALM family
106563499
Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
106563499
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
LRR_9
fn3
Ig_2
LRR_EndoS
LRR_14
LRR_LRWD1
LRRCT
Sp38
Motif
Other DBs
NCBI-GeneID:
106563499
NCBI-ProteinID:
XP_013984625
UniProt:
A0A1S3L1D1
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All DBs
Position
ssa11:complement(75379419..75398012)
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AA seq
921 aa
AA seq
DB search
MPKSKSQLSHPYSATPHSKSSRRPSPKKHSLKGVHPEINLLSPIELKPKVTSPSLSPPAC
SMTPQTVVWLAVVTCSCVFSVLLGPGVSAGETWGMVSICPFHCVCRNLSESLSTLCVNKG
LLFVPPDIDRRTVELRLADNFILEVGRVDFANMSGLVELTLSRNTIHALKPLAFADLESL
RSLHLDTNRLTVVGPKDLSGLTNLQHLIINNNQLTNVSTEAFDDFLQTLEDLDLSYNNLR
KVPWEAIQNMASLHTLNLDHNLLDHIAEGSFGELYKLARLDMTSNRLQTLPPDPLFSRSQ
MGVVSPTPYNAVISLSFGGNPLHCNCELLWLRRLIRGDDMETCATPNHLAGRYFWSIPEE
EFTCEPPLITRHSNKLWVLEGQRATLRCRAIGDPEPIIHWISPDDRIVANSSRVHSYYNG
TLDVLVTRARDDGAYTCIAINAAGEATALINLKIIPLPHRGNNTVPLTSPRGDPGSSDIS
SGRRGAGRNGKGGGGVVTVKNATEGESGDASEHLVGVLGVTATSAQVRWVLGRATGPYLV
WMYQIQYNCTADDALVYRILPPTSNAFLLKNLVSGADYSLCVLAIFDDGLSTLATTKVLG
CTQFSTKEDFPECRSLQAHFLGGTLTIMVGGVIVVMLLVFTVAMMVRHRVCGDCRDEGHY
PAHHHDNFLPSKGEVDVYAQTNGNGRVMMVALPKGILGQKAKPLPSKTKPQAKNKPRTTL
DSDQLSGERKVEKQGLEVGVRGKRFPPFTPESERVTLYYSPANTSQTLPHPRAHKALRHS
GKLKLRRSEERESDLDKMVGSRCSLDSWAQGEEEGRLKDWRRGDRPPLGRTRSCSFDVGE
ITTTTCYSYAKRLSVIWTRRSQSVHGMLVQCASTASSASSMGSDQQPPALTHGYLHAFNT
SNSNSNTRVAAKAGELEESVV
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaatccaaatcacaattatcacacccatactcagctacaccccactcaaaatcc
tctcggaggccctctccaaagaaacactctctaaaaggtgtccacccggaaataaacctg
ttatctcctattgaactcaagccaaaagtcaccagcccttccctgagcccccctgcctgc
tctatgaccccacagactgtagtctggctggccgtggtgacctgctcctgtgtgttctct
gttctgctgggcccgggcgtgtccgctggagagacctggggcatggtctccatctgtccc
ttccactgtgtgtgtcgaaacctctcagagtctctgagcacgctctgtgtcaacaagggc
ctgctgttcgtccctcccgacattgaccggcgcaccgtggagctccgtctggctgacaac
ttcatcctggaggtgggcagagtggactttgccaacatgtcaggcctggtagagctaact
ctgtccaggaacaccatccatgccctgaaacctctggccttcgctgaccttgagagcctg
cgttcactccacctggacaccaaccggctgaccgtggtggggccaaaagacctgtccggc
ctgactaacctacagcacctcatcatcaacaacaaccagctgaccaacgtctccaccgag
gcatttgatgacttcctgcagacgctggaggatctggacctgtcctacaacaacctgagg
aaggtcccctgggaggccatccagaacatggccagcctgcacaccctcaacctggaccac
aacctcctggaccacatcgccgagggctccttcggagaactctacaagctggctcgtctc
gacatgacgtccaaccggctgcagactctgccccccgaccccctgttctcccgctcccag
atgggcgtggtcagccccaccccctacaatgctgtcatcagtctgagcttcggtgggaac
cccctgcactgcaactgtgagctgctgtggctgaggcggctgatccgcggggacgacatg
gagacgtgtgccacccccaatcacctggccgggcgctacttctggtccatcccagaggag
gagttcacctgtgagcctccgctcatcacgcgccactccaacaagctgtgggtgctggag
ggccagagggccacgctgaggtgccgtgccattggagacccagagccaatcatccactgg
atctccccagacgaccgcatcgtagccaactccagccgtgtgcactcatactacaacggc
accctggacgtgctggtgacccgtgcccgtgacgatggggcctacacctgcattgccatc
aacgctgctggggaggctacggccctgataaacctgaagatcatccccctccctcaccgc
ggcaacaacactgtccccctaaccagccctcgaggggaccccgggtcatcagatatctcc
agtgggagaagaggggcaggccggaacgggaagggtggtggaggggtggtgactgtcaag
aatgccacagagggggagagtggagatgccagtgagcatttggtgggggtcctgggagtg
actgccacctctgcccaggtgcgctgggtccttggccgggccactgggccatacctggtg
tggatgtaccagatccagtacaactgcactgcagatgacgccctggtgtacaggattctg
cctcctacaagcaacgctttcctgctaaagaaccttgtgtctggagccgactacagcctt
tgtgtcctggccatctttgacgacgggctgtccaccctggccaccaccaaggtcctgggc
tgcacccagttcagcaccaaggaggacttcccagagtgccgttccctgcaggcgcacttc
ctgggcggcacactgacaatcatggtgggtggggtcatcgtggtgatgctgctggtgttc
accgtggcgatgatggtgaggcaccgtgtctgtggagactgcagagacgagggtcactac
cctgcccatcaccatgacaacttcctgccctccaagggagaagtggacgtttacgctcag
accaatgggaacgggagagtgatgatggtggctctgcccaaaggcattcttggccaaaag
gctaagcccctgccatcgaaaaccaaaccccaagccaagaacaagcccaggacaacactt
gactctgaccaactcagtggagagagaaaggttgagaagcagggcctggaggtaggcgtg
agggggaaaagattcccccctttcacccccgagagtgagagagtgacactgtactactcc
cctgccaacacctcccagaccttaccccatcccagagctcacaaggccctgagacactca
ggcaagctcaagctgcgccgctctgaggagagggagagcgacttggacaaaatggtgggc
tccagatgcagcctggactcctgggcccagggggaggaggaggggcggttgaaggactgg
aggaggggcgatcgtccgccactcgggaggacacgcagctgctcctttgatgtgggcgag
atcaccacgacaacctgctacagctatgccaagcgactgagtgtgatatggaccaggagg
agccagtcggtgcacggcatgctggtccagtgcgcctcaacggccagttcagcgagcagc
atgggcagcgaccaacagccccctgccctcacacatggttacctgcacgccttcaacacc
tccaactctaactctaacaccagagtggctgccaaagctggagaactggaggagagtgtt
gtgtag
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