Salmo salar (Atlantic salmon): 106563608
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Entry
106563608 CDS
T04363
Symbol
b4galt4
Name
(RefSeq) beta-1,4-galactosyltransferase 4
KO
K07969
beta-1,4-galactosyltransferase 4 [EC:
2.4.1.90
2.4.1.275
2.4.1.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00533
Glycosaminoglycan biosynthesis - keratan sulfate
sasa00601
Glycosphingolipid biosynthesis - lacto and neolacto series
sasa01100
Metabolic pathways
Module
sasa_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
106563608 (b4galt4)
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
106563608 (b4galt4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sasa01003
]
106563608 (b4galt4)
Enzymes [BR:
sasa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.90 N-acetyllactosamine synthase
106563608 (b4galt4)
2.4.1.275 neolactotriaosylceramide beta-1,4-galactosyltransferase
106563608 (b4galt4)
Glycosyltransferases [BR:
sasa01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
106563608 (b4galt4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
106563608
NCBI-ProteinID:
XP_013984806
UniProt:
A0A1S3L1G8
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Position
ssa11:78710967..78720780
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AA seq
355 aa
AA seq
DB search
MGICPAVSMFFRKCKYMILLLLSVSVLAWYATFAGETVKAIQETLLPEQTLADNTEVLSG
GEGNLWRSVIQVFSNPLPDTSPPKQSCPEKSPLLQGALNLTFEDSLTLKEVESENSGVAE
GQYQPPDCLAKQSVAILIPHRKREKHLLYLLHHLHPFLQRQQLHYSIYVIHQAGEVTFNR
AKLLNVGYLEALKDYDWDCFVFHDVDLVPENDYNLYKCDQQPKHLVVGRNATGYKLRYKG
YFGGVTAMMKDQFHKVNGFSNTYWGWGGEDDDLRIRVELQKMEIIRPPPLIARYTMVFHK
RDSGNEINKDRMRLLGRTPKVWRKDGLNTCSYSTLSVERSPLYINVTVDIGEPMH
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgggaatctgtcctgctgtgtccatgtttttccggaagtgcaagtatatgatactgttg
ttgctctctgtctccgtcttggcttggtacgccacttttgccggtgaaacagtgaaagca
attcaggaaacccttttaccagagcaaacgcttgctgataatactgaggtcctgagtggg
ggagaaggaaacttgtggagatcagtgatacaggtcttctccaatcctctccctgacacc
tcaccaccaaaacaaagctgtcctgagaaatcgccactgctccagggagccctaaacctc
acatttgaggactctctaacgctgaaggaggtggagagtgagaacagtggagtggctgag
ggccaataccagcctccagactgcctcgccaagcagagtgtggctatcctcattccccat
cgtaagcgagagaaacacctcctttacctcctgcatcacctgcaccccttccttcagagg
cagcagctgcactacagcatctacgtcatccaccaggctggagaggtgacgtttaaccgt
gccaagctacttaatgttgggtacttggaggcactcaaggactacgattgggattgcttc
gtttttcatgatgtggatctggttccagagaacgactacaacctatacaagtgtgaccaa
cagcccaaacacttagtggtcggcaggaacgccacagggtacaaattgcgatacaaaggg
tactttggaggggtgacggccatgatgaaggaccagtttcacaaagtgaacggcttttca
aacacttactggggatggggtggggaggatgatgaccttcgcatcagggtggagctccag
aaaatggaaattatacgccccccccctctcatagcacgctataccatggtatttcataaa
agagatagcggcaatgaaatcaataaagacaggatgcgtttgctaggacggacacctaaa
gtctggagaaaggatggccttaacacctgctcctacagtactctatcagttgagaggtcg
cctctatacattaatgtcaccgttgacattggcgaaccaatgcactga
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