Salmo salar (Atlantic salmon): 106563667
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Entry
106563667 CDS
T04363
Symbol
nkx6-1
Name
(RefSeq) NK6 homeobox 1
KO
K08030
homeobox protein Nkx-6.1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106563667 (nkx6-1)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
106563667 (nkx6-1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
PKK
ABC_trans_N
Motif
Other DBs
NCBI-GeneID:
106563667
NCBI-ProteinID:
XP_013984924
UniProt:
A0A1S3L2Y9
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Position
ssa01:complement(118165340..118168783)
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AA seq
331 aa
AA seq
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MLAVGQMDGSRQSAFLLSTPPLAALHSMAEMKTPLYPAYPLSSTGPASSTSPTATSPNPG
GIPVSSPGIKPSSGMSSLGSPHQCSALGTPHGINDILSRPSVLSPGAAAAVAASSSAGIL
SGMPRFSSLSPPPPHGLYFSPSAAAVAVARYPKPLTDLPGRTPIFWPGVMQSPHWRDARF
ACSPHALCFTFSDQNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAY
SLGMTESQVKVWFQNRRTKWRKRHAAEMASAKKKQDSETERLKGASENEDDDDDYNKPLD
PNSDDEKITQLLKKHKPNSSLLIHTSENDSS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgttagccgtggggcagatggacgggtccagacagagcgctttcctcttaagcacccca
cctttagcagctctgcatagcatggcggagatgaagaccccactctacccagcctacccg
ttatcttccaccgggccggcctcttctacctcacctactgccacctctccaaaccccggt
ggcatcccggtgtcctcaccggggatcaaaccatcctccggaatgtcatctctcggatcc
ccccatcaatgcagcgcgctaggaacacctcatggaataaacgacatcctcagtcgtccc
tcggtcctttccccgggagctgctgctgccgttgctgcgtcctcttctgccggaatcttg
tccggaatgccccgcttcagtagcttgagccccccgccaccccatgggctctacttcagc
cccagcgctgcagcagtggcagtggctcgctaccccaagccgttgacagaccttccaggc
aggaccccgatattctggccaggagtcatgcaaagcccacactggagagacgccagattc
gcatgttcaccccatgctttatgttttacattttcagatcagaattctgtactgctcgac
aaagatggaaaaagaaaacatactcgtcccaccttctctggacaacaaatctttgccctg
gaaaagacttttgaacaaacgaaatacctcgctgggccagagcgagcacgactggcctac
tcgttgggaatgacagagagccaagtgaaggtgtggtttcaaaaccgaagaactaaatgg
agaaaacggcacgcggctgagatggcttcggcaaagaagaagcaggattcggagaccgag
aggctgaaaggggcttcggagaatgaagacgacgatgatgattataacaagccgttggac
cctaactcagacgacgagaaaataacacaactactgaaaaaacacaaaccaaactcctca
ctccttattcatacgtcagaaaacgacagttcgtag
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