Salmo salar (Atlantic salmon): 106563872
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Entry
106563872 CDS
T04363
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106563872
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106563872
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GFIT
Motif
Pfam:
Ion_trans
PKD_channel
C19orf12
Trans_reg_dom
Motif
Other DBs
NCBI-GeneID:
106563872
NCBI-ProteinID:
XP_013985270
UniProt:
A0A1S3L391
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Position
ssa11:88195972..88219479
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AA seq
489 aa
AA seq
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SLSLSVCLSLSLSLSLQYSGCKPRNQWEMWHPTLVAEAVFAIANIFSSLRLISLFTANSH
LGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYETKASDEKGKCKGIRCVEQN
NAFSTLFETLQSLFWSIFGLISLYVTNVDADHQFTEFVGATMFGTYNIISLVVLLNMLIA
MMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSPFNIVPSPKSVWYLVCWTKRHVC
KRTRSKPTDTFGTLGTRAAENLRRNRQYQEVLRNLVKRYVAAMIRDAKTEEGLTEENFKE
LKQDISSFRYEVMGMMKTGKPGLGGPGGVVGGGSGGAGVGGGQSCLAYADRSLKVPTTPT
PIGQLKNNKKTLFTVTASIIQQGGATASSPRLPDALAFNGMGLANGLPPLPADGGSSGSS
RDKQGQRKDFPRDITDFGLFQKRQRGGAGATGVGNIYSVSEEMGETGESDGEGRKGEAGG
EEGKGLSSL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
tctctctctctctctgtctgtctctctctctctctctctctctctctccagtacagtggc
tgtaagcccaggaaccagtgggagatgtggcatcccaccctggtagctgaggctgtgttt
gccattgccaacatcttcagttcccttcgtctcatctccctgttcacagcaaactcccac
ctgggacctctacagatctccctgggacgcatgctgctggacatcctcaagttcctcttc
atctactgtctggtgttgctggcgtttgccaacgggctgaaccagctctacttctactat
gagacaaaggcctcagacgagaagggcaagtgtaaaggcatccgctgtgtcgagcagaac
aacgctttctccacgttgtttgagacgctccagtctctgttctggtctatcttcggtctg
atcagtctgtatgtgactaacgtagatgcggaccatcagtttacagagtttgtaggggcc
accatgtttggaacctataatataatctctctggtggttctactaaacatgctgattgcc
atgatgaacaattcctatcaacacatcgctgaccatgcagacatcgagtggaagtttgca
aggaccaagctgtggatgagttactttgaggaggggggtactcttccttctcccttcaat
atcgtacccagtcccaagtcagtgtggtacctggtgtgttggaccaagagacatgtctgt
aagaggacccgttccaaaccaactgacaccttcggcaccttggggacgcgagcagcagag
aacctgaggagaaaccgccagtaccaggaggtgttgaggaacctggtgaagcgatatgta
gcagccatgatcagagacgctaaaacagaggaggggctgactgaggagaactttaaggag
ctgaagcaggacatctctagtttccgttacgaggtgatggggatgatgaagacaggtaaa
cctggtctgggtggtccggggggtgttgttgggggtggttcggggggggctggggttggt
ggagggcagtcctgcctagcctatgccgaccggtcccttaaagtccccaccacccccaca
cccattggccagctgaagaacaacaagaagacactgttcaccgtaaccgcctccatcatc
cagcagggcggcgccacagcctcctctcctcggctcccagacgcacttgccttcaacggg
atgggcttggctaacggcctgccccccctgcccgcagatggtggttcctctggaagctcc
agagacaagcagggtcagaggaaagacttccccagggacatcactgattttgggttgttc
cagaaacgccagaggggtggagctggagctactggggttgggaatatatactctgtgtcc
gaggagatgggggagacaggggaatcggatggggagggacggaagggggaggcagggggt
gaggagggcaagggactatcctctctataa
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