Salmo salar (Atlantic salmon): 106563880
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Entry
106563880 CDS
T04363
Name
(RefSeq) FRAS1-related extracellular matrix protein 2-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106563880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
sasa04091
]
106563880
Lectins [BR:
sasa04091
]
C-Type lectins
Lecticans
106563880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
106563880
NCBI-ProteinID:
XP_013985280
UniProt:
A0A1S3L3A1
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All DBs
Position
ssa11:complement(88871155..88991974)
Genome browser
AA seq
1939 aa
AA seq
DB search
MLLFYRFILVAASLSGSGVAQLSDSYGLSFPLRSELSEDAILVANNGIRVPFGRSVFIDP
VNDLVIQTQPGDRCSITVLDNQPLSQRPGHLSPKKFPCDFGPNDVTYSHFGSRSLAKDRV
RLQLRYDTQTETVIIPFMTEVEVVFTQMEVVTKNMPLTVAKLNGVSNAIDKKILEFTYDR
NSQKCKVNSLASGSALPKYGRLVDDGLTKIMDCDEFIQSDIRYEHTFVHKSPNRDHVPMV
VELCDKEGNVIKEEYFQLMIRIKDGDANTPPKPSFMATLMMEVSQFVMTALTTDMLAAED
LESNPDELIFNITSPLSYEDGYIVSTDDRNLPITSFYQRDLRDLKIAYKPPSLDSDTERI
FQIEFEVVDPDVAVSDPFAFMIVVKPINSLAPVVTRNTGQLLYEGQSRPLFSTHNLEISD
EDNLDGVTVTVVDGLRHGDLIVLGSRSKYFTAADLNTGVVIYRHDGSDTYSDNIIFRMTD
GKNQVEFLFPLTIVPMDDEPPIINVNTGLVLFKNQIMAISPLMLSAADIDSEDSTIKFMI
EPPFSTIGGLLLRQSDAPEDPESWKFNAEDEVYEKEVTEWLQKDITDGKVFYKHTGPHNT
DTVIDQFVFKVHDDNDPPNESGESMFIIRVQPIDDVPPELFPGTTLQVTVQEYQLTHFGK
NMLLYTDLDSEDHDLKYTVIQPPTDTDENSPVVFGSIVLTESPDTEVNEFTQAQVNHHKI
SYSPPDQELGITAHVLQFRFSVEDTAGNSVEGAFRIFLQPVDNKPPQITNTGFSVFEQGM
HVISSAELDASDPDTDSKQILFTLRQPPQHGQVLLTFSDLPKGGAFYLEDISDRKITYVQ
NGDQTVSDVFQLDVSDGIHVITVKVRVVVKPVDDEMPTVSLPAETVGSHMDVLENGAMEI
TTGALKGWDEDTDDLQLTFIIENAPVFGVILVAGAHAVKFTQADIINGLVVYAHTGGEIG
LTSIKDSFNLTLTDMSDDWSVGGNKVNGVHVGVTIIPVDNQAPEVTVGDQFIVVEGQKYA
IGAQYLKAEDKDTTSDDILCTIIVQPTSGYVENISPAPGSESSRSGTAVSAFYIRDIREG
HVYYVQSIHKGLEPVEDRFTFRCSDGINFSKRHFFPIVIIPANDEKPEIYLREIVVMEGM
NIVIDTHLLNGADTDIPAEELTFIISKLPKHGFILNQLATGSVPVINFTLEQIREASSLI
YEHDDSETTEDSFDVILTDGKYSVERTAMVMIIALDDETPRMLVNVGLEVEVGEAKEINN
KVLKATDLDSDDGALTYVIRFGPVQGVLQRKTPSGSLENIMLGMNFTQRDVDKRLIVYTH
NSQEGIRDLVRFDVTDGMNPLIDRYFYITIRSIDMVFPDVVSKGVSLKEGGRVTLTTDLL
STSGLNSPDECLVFTITRAPVRGHLECTDTPGIPIVSFTQLQLAGSKVYYIHTSDDEVKM
DSFEFEVTDGYNPVLRTFRVSIVDVDNKKPVLTVHGLVVTEGQSKLLTPFELTAEDQDTA
DRLLKFTITQPPVHGKLLHNHTSPVTIFTKQDLNENLISYKHDGTETSKDSFSFTVTDGT
HTDFYVFPDTVFETRHPQTMKITVVAIDNGVPQLVVNKGAPTLRILSTGHLGFPMTSKVL
RALDRDSVPASLVFHVTTEPKHGYLINLGKGNDSIDTFSQADIDDLKICYVLRNEENATT
DLFLFSVEDNGGNKLKEQQFRLDWSWISLEREHYVVDEQDKFLEVVLKRRGYLGETSFIG
IGTQNGRAENDQDFKGHSQKQVQFNPGQTRATWRVVILADGIFEQSETFRILLSEPVMGA
LEFPATATVEILDPSDESTVFIPQSSYWVKEDVGEMLVPVHRSGDISQELMVICYTQQGS
ATGTVPSTVLSYSDYISRPEEHGSILHFDKGETEKQCGVVVIDDSLYEVEESFNVTLSLP
IGGCLGAHYTTTKVNIYPD
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atgctactattttatagatttatcctcgttgccgcgtcgctgtcaggtagcggcgtggca
cagctctcagatagctacggattatctttcccgttgaggtcagaactgtctgaggacgcg
atactggtggcaaataacggaatacgcgtgcctttcgggagatccgttttcattgatcct
gtcaatgatttggtgattcaaacgcaaccgggggaccggtgcagcatcaccgttctggat
aaccagccgctttcccagagacccgggcacctctctcccaaaaagtttccgtgtgatttc
ggtcccaacgacgtcacctactcccacttcggttcgaggagcctggctaaggacagagtg
agactacagctcaggtatgatactcaaaccgaaaccgttatcatcccattcatgacggag
gtagaggtggtttttacgcaaatggaggttgtcaccaaaaacatgccgctgaccgttgct
aaactgaacggcgttagtaatgccattgataaaaagattttggaattcacttatgacaga
aactctcaaaaatgcaaggtgaactctttagcgagtggtagcgctctccccaaatacgga
agacttgtagatgatggactcactaaaattatggactgtgacgaattcatccaatctgac
atccgttacgagcacacgtttgttcacaaatcccccaacagagaccatgtgcccatggtt
gttgaactatgtgataaagagggaaacgtaataaaagaggagtattttcaactgatgatc
cgtatcaaggatggagatgcgaacactcctcctaaacccagcttcatggcaacgctgatg
atggaggtgagtcagtttgtgatgacagctctgaccactgacatgctggctgcggaggac
cttgagtcgaaccctgatgaacttatcttcaacatcacctcccctctctcttatgaggat
ggttatatagttagcacggatgacaggaacctacccatcacctcgttttaccagagagac
ctacgggacctgaaaatagcctacaagcctccctccctggactcagacacggagaggatc
tttcagatagagtttgaggtggtggatccggacgtggcggtctcggacccctttgcgttc
atgattgtggtgaagccgattaactctctggcgccggtcgtgacgcggaatacgggtcag
ctgctttacgaaggtcagtcccgcccccttttctctacccacaacctggagattagtgac
gaggacaacctggacggtgttacggtaaccgtcgtcgacgggctccgccacggcgacctc
atagtcctggggtcgcgcagtaagtacttcacggctgcggacctgaatacgggtgtggtt
atctaccgacacgatggcagcgacacgtacagtgacaacatcatcttcagaatgacagat
ggcaagaaccaggtggagttcctgtttcccttgacgattgttcccatggacgacgagcct
cccatcatcaacgtcaacactggtcttgtgctcttcaagaaccagattatggccatctct
cctctgatgctcagcgccgctgacatcgactcagaagattccacgatcaaattcatgatc
gagccgccattctcgaccatcggggggttgctgctgaggcagtccgacgccccagaggac
cccgagtcatggaagttcaacgctgaggatgaggtgtatgagaaggaggtgacagagtgg
ctgcagaaagacatcacagacgggaaggtgttctataaacacaccggaccacataacact
gacacagtcatagaccagtttgtgttcaaagtccatgacgacaatgacccgcctaacgaa
tcgggcgagagcatgttcatcatcagggttcaacccatcgacgacgttcccccagagctt
tttcccggtaccacgctccaagtgactgttcaggagtaccagctgactcatttcggtaag
aacatgcttctctacaccgatctagactctgaggaccatgacctgaaatatacagtgatc
cagccgccaacagacacagacgagaacagcccggtggtgttcgggtccattgttctgacc
gagagccccgacactgaggtcaacgagttcacgcaggctcaggtcaaccaccataagata
tcctacagccctcccgaccaggagctgggcatcacggctcacgtcctccaattccggttc
tccgttgaagacacggccgggaatagcgtcgagggggctttcaggatttttctccagcca
gttgacaacaaaccaccacagatcactaacactggcttttctgtgtttgagcaaggcatg
catgtgatatccagtgctgagttggacgcatcagacccagacacagacagtaaacagata
ttgtttaccctcagacagcctccgcagcacggccaagtcctgcttaccttctcagaccta
cccaaagggggagctttctacctagaggacatctcggacaggaagatcacatacgtccaa
aacggcgaccagacggtgagcgacgtgttccaactcgacgtcagcgatggaatccacgtc
atcacggttaaagtcagagtcgtcgtgaagcccgtagacgacgagatgccgactgtcagt
ttacctgccgagacggtcggttcacacatggacgtcctagagaatggagctatggagatc
accacgggcgccctcaaggggtgggacgaggacaccgacgacctccagctgaccttcatc
atcgagaacgcgcccgtgtttggtgtcatccttgttgccggggcgcatgccgtgaagttc
acccaagccgacatcatcaacggtttagtggtgtatgcccacaccggcggagagattggc
ctgacatccatcaaggacagcttcaacctcaccctaactgacatgtcagatgattggtca
gtgggcgggaacaaggtcaatggtgtccacgtcggcgtcacaatcatccccgttgacaac
caggcccccgaggtaaccgtgggtgaccagttcatcgttgtcgaaggacagaagtatgcc
atcggagcacagtatttaaaggccgaagacaaagacacaaccagtgatgatattctctgc
accatcatcgtccagcccacgtctggctatgtggagaacatctccccagctcctggatca
gagagttcacggtcagggacggcagtcagcgccttctacatcagagacatcagagaagga
catgtatattacgttcagagtatccacaagggcttagaacccgtagaggacaggttcaca
tttagatgctccgacggtatcaacttctcaaaaaggcatttcttccctattgtgattatt
ccggctaatgatgaaaagccagagatttacttgagggagatagttgtgatggaggggatg
aatatagtcatagacactcatctcctgaacggagcagacactgatatcccagctgaggag
ctgactttcatcatctctaaactgcccaaacacggcttcatcctcaaccagctagccaca
ggctcagtcccagtcataaacttcaccttagagcagatcagggaagcttccagtttaatc
tacgaacatgacgactctgagaccaccgaggacagcttcgacgtcattctaacagacggg
aaatattcggtagagagaaccgccatggttatgatcatcgccctcgacgacgagacaccg
agaatgctggttaatgtcggtctggaggtggaagtaggtgaggcgaaagagatcaacaac
aaggtcctcaaagccaccgatctagactcggacgatggagcgttgacctatgtgatccgc
ttcggtcctgttcagggtgttcttcagaggaaaaccccatctggttctctggagaacatc
atgttaggcatgaatttcacacagagggatgtggacaaaaggttgatcgtttacacacac
aatagtcaggaaggcatccgtgacctggtcaggttcgacgtcaccgacggcatgaaccct
ctgatcgatcgttacttctacatcaccatcaggagcatcgacatggtcttcccagacgtg
gtcagcaagggagtctctctgaaggaaggcggtagagtgacattgaccacagatcttctc
agtactagcggtctcaacagtccagatgaatgtctggtgttcaccatcaccagagctcca
gttagaggacacctggagtgtactgatacaccagggatccccatcgtgtcattcacccaa
ctccagctggctggcagtaaagtctactacatccatacctcggacgacgaagtcaagatg
gacagtttcgagtttgaggtaaccgacggttacaacccggtgttacgtacgttccgagtc
tctattgtggatgtggataacaagaaaccagttttaacggttcatggactcgtggtcacc
gaggggcagagtaaactcctcacgccattcgagctgaccgcagaggaccaggacacagct
gaccggttgttgaagttcaccatcacccaaccaccggtgcacggcaaactcctccataac
cacacctcaccggtcaccatcttcaccaagcaagacctcaacgagaacctcatcagctac
aaacacgatggcaccgagacctccaaagactccttctcatttactgtgactgacgggacg
cacactgacttctacgtgttccccgacacggtgttcgagacacggcacccacagacgatg
aagatcacggtggtggccatagataacggtgtcccccagctggtggtgaataagggcgcc
ccgacactgaggatcctgtccacggggcacctggggttccccatgacctccaaagttcta
cgggcgttagacagggacagcgttccggcttccttagtattccatgtcaccacggaaccc
aagcatggttacctcatcaacctgggcaaagggaacgactccatcgacaccttcagtcaa
gctgacattgatgacctgaagatctgctatgtgttaagaaatgaggagaacgcaaccaca
gacctcttcctcttctctgttgaagacaacggtggaaacaagctgaaggaacagcagttc
cgtctggactggtcctggatctctctggagagagagcactacgttgtggacgagcaggac
aagttcctggaggtggtcctcaaacgacgagggtatctgggagaaacctccttcataggt
attggtacccagaacggcagagcggagaatgaccaggactttaagggtcactcccagaag
caggtacagtttaaccctggtcagacgcgggccacatggcgtgttgtgatccttgccgat
gggatctttgaacagtctgaaaccttccggatccttctgtctgagcccgttatgggagca
ctggaattccctgccaccgccacggtggaaatactggacccttccgacgagtccacagtg
ttcatccctcagtccagttactgggtaaaggaggatgttggagagatgctggtgcctgtc
cacaggagtggagacatcagccaggaactcatggtgatctgctatactcagcagggttca
gccactggtaccgtcccctctacagtcctgtcctactctgactatatttccaggccagag
gagcacggcagcatcctgcacttcgacaagggagagacagagaaacagtgtggcgtagtc
gtcatcgacgactccctgtacgaggtggaggagagcttcaacgtaacgctatccctgccc
atcggagggtgcctcggtgcacactacaccaccactaaagtcaacatatatccagac
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integrated database retrieval system
