Salmo salar (Atlantic salmon): 106563887
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Entry
106563887 CDS
T04363
Name
(RefSeq) nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106563887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106563887
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
106563887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
106563887
NCBI-ProteinID:
XP_013985296
UniProt:
A0A1S3L2W7
LinkDB
All DBs
Position
ssa01:118529956..118578161
Genome browser
AA seq
2764 aa
AA seq
DB search
MPSGRKKSNKAVGRCEEQSESDDIEQPVHRHDSPTPIFSMNGDMPHVPITTLAGIASLTD
LLNQLPLPSPLPATTTKSLLYNGRIAEEVNCLLACRDENLVSQLAHSLNQVSTEHIELKD
NLGSDDPEGDVPVLLQTVLSRNPNIFREKNIMQQPIMPQYKMSQNSMHGSPASTNYQQST
ISHSPSSRFASPQMGSGARFTPQQNSPVPSPYAPQSPASYMQQYPHPPSYSQHQQIQQEL
HGSPVVPAAPSYSGSPKRPVQPCLEVQTQPQASPHQNPSTPTLVASPVVPASMRNIHDNK
VSGQISSNSANHNARHGSNEDYMNIVHRLGNEESDPSMRNASFPLRSPQSVSSPVGSEGT
PKGSRPGLILQSPPPYAPPRDAAPDLLLDSPDHKKKQKKLTKEEKEQLEKAAMYDIVSSP
SKDSTKLTLKLSRVKSSELDQSGELLSGVEDQDTDLAYNSLQFSRTQQDPAHRLAPGQGE
QSGYQQVPVLQNTKQAIGVISGAVYDDAEMDALAEIERIERETLIERERCSKEVQDKDKP
LKKRKQDSYPQEPGAGGTAGATQPGVGGGNAGSKLAPQEASAASNGASRPALMVSIDLQQ
AGRADGQPEVNMGTPTPAVEARRWPEERLGPEDGSDSTGVLRLKSKTDGERLQTADGRPE
VIKQRADTPKKLGPDGRPETPKHKHENRRDSSKHRHDGKPDNGKARPDSRTPDTPRQRHE
GRSDSGHREDRSRDNDPSRIRRPETPSKSSRGEHDSKHGRDRDRERADKDRERKHRTEAG
EPRDRRSPEQRSRPESPRVKQEGRGGVDPSGRQRTDRPCPNLKPPNKEERRSGEERRSGE
ERRSGDGSRNRQDSKQQPQPAESKQEFPAYLLGGVKSGGFKNFVIPKMKRDKDGHVLAAE
MRKHGSGLGPVMEGWSEPRVKLERLGLVEEMKTGAKPVVVLQKLSIDEVQKIIREREDRN
ARGSKSSKSRHCHEKSGKGGLDESVLKELPPHLIAEIESTMPLCERVKMNKRKRSTVNEK
PKYAEVDSDDSDDDSVTESARKRHKKEREKTWEPDERERRGSGEHRRSSWGSQERRKGSG
RRYRERSPEESDEESPPPSMSDLARKMKKKEKQKKRKAYEPKLTPEELMDSSTFKRFSAS
VDNILESLEDIDFNAMDDDEIPQELLLGKHQLSELGSESAKIKAMGITFRLPSDKLVKVL
NILEKNIQDGSKLSTLMNHDADAEDEERLWRDLIMERVTKSADACLTALNIMTSSRMPKA
VYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVNPHGGGYLSSRAKRAKSSTHKQRVIIML
YNKVCDIVSNISELLEIQLLTDTTILQVSSMGITPFFVESVSELQLCAIKLVTAVFSRYE
KHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDKDGEPMYIQMVTALVLQLIQCVVHLPN
NRDSHDDEYNKKVDQDVLITNSYETAMRAAQNFLSVFLKKCGSKQGEEDYRPLFENFVQD
LLSTVNKPEWPASELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVAARLRKDAVTSQ
MDQRTIDRILKETQGNDETQQLQKALLDYMDENAETDPSLVFARKFYIAQWFRDTLTETE
KAMKSQNQRGDEDSSEGQHHAKDIESTGEIMQRAEARKKYLRNIIKTAPSQFSTLRMNSD
TVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMKCLSEVVAVDPSI
LARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLSRPQLTEQYYDMLIERILDTGISVRK
RVIKILRDICLEQPTFNKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPNHDKDAM
TRKILNITDVVSACKDTGYDWFEQLLQNLLKTEEDASYKPARKACVQLVDNLVEHILKYE
ESLADIENKGVNSNRLVSCITTLFLFSKNRAQLMVKHAMTMQPYLTTKCNTQSDFMVICN
VAKILELVIPLMEHPSETFLTTIEEDLMKLTIKYGMTVVQHCVSCLGAVVNRVTHNYKFV
WACFNRYYGALTKLKTQHSEDCNNPVLAANKPALLRSLFTVGALCRHFDFDQEEFKGPSK
VVIKDKVMELLLYFTKHEDEEVQTKAIIGLGFQFIQYPGLMFMQDVKSLYNGILSDRKSS
VNLKIQVLKNLQTYLQEEDSRMQEADQQWKKLSKQEDLKEMGDISSGMSSSIMQLYLKQV
LEAFFHTLSNVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPTMRNKADQQLVEID
KKYTGFIHMKAVAGMKMSYQVQQAIWSAKGTVIRGYRQDETTSALCAHLFSMVRSNRQHR
RAFLISLLNLFDDSSKMEVNMLLYIADNLACFPYQSQEEPLFIMHHIDITLSVSGSNLLQ
SFKESLLKEPRRREKKQKERKYHSEEDNSEEENEERHSSRSNSSDEDDEVVHRPKKPKHR
AQAHVESDSDSDLEMEDLDKVMQRLPDNPIPLLDFANASQGILLLLVLKQHLKNLYGFSD
SKIQKYSPTESAKVYEKAVNRKSHVHFSPRQTLDFLTSDLANVELTYDIKRRIVKQYLDF
KLLMEHLDPDEEDEEGEASASANARNKAITSLLGGSSHQDHKNHHQAPIETDDDESDGDE
KTPGSSRRSRKHGDSAEASGHMNETVGSMDVIALCCPKYKDRPQIARVIQKTNTGYRVHW
MAGSYSGVWAEAKKRDGRKTVPWVDTIKESDIIYKKIPLTSAHKLTNRVVQTLRSLYSAK
DGTS
NT seq
8295 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcggcaggaagaaatcaaataaagcggttgggagatgtgaggaacagtcggag
agcgacgacattgagcaacctgtgcatcgacacgactcccccacccccatcttcagcatg
aatggggatatgcctcatgttcccattactactcttgctgggatcgctagccttacagac
ttgttaaaccagctacccctgccatcccctctccctgccaccaccactaagagtctgctg
tacaatgggaggatcgcggaggaggtcaactgtctgctggcctgccgggatgagaacctg
gtgtcccagctggctcacagcctcaaccaggtttccaccgagcacatagagctgaaggac
aacttgggcagtgatgacccggagggtgacgtgcctgtgctgctgcagacagtgctctct
aggaaccccaacatcttcagggagaaaaatataatgcagcagccaataatgccgcagtac
aagatgtcccagaattccatgcatgggagtccggcgtcgacaaactaccagcaatccact
atctcacacagcccttctagtcgctttgcatctccacagatggggtcaggcgctaggttc
acgccccagcagaacagccctgtgcctagcccttacgccccccaaagccctgcaagttac
atgcagcagtaccctcatccccccagctattctcagcaccaacagatccagcaagagctg
catggttcccctgtcgttccggctgcaccctcttattcaggaagccccaagaggcctgtg
cagccctgcctagaggtgcagacccagccccaggcctccccccaccagaacccctccacc
ccaaccttagttgccagtcccgtggttcctgctagcatgcggaacatccacgacaacaag
gtctccgggcaaatttcaagcaactcagccaatcacaatgccagacatggctcgaacgaa
gactacatgaacatagtccacagactagggaatgaggagagtgatccttccatgagaaat
gcctccttcccgctccgatcgccccagtctgtttcttcccctgtgggtagtgaagggacc
ccaaaagggtcacgacctggcctcattctgcaatcccctccaccttacgctcccccccgt
gacgccgctcccgacctcctcctggactctcctgaccacaagaagaagcagaagaagcta
actaaagaggagaaagagcagttggaaaaagctgccatgtacgacattgttagctctccc
tctaaagactctaccaagctgacgctcaaactgtcccgggtgaagtcctctgagttggac
caatctggagagctcctatctggggtagaggaccaggacactgacctggcctacaacagc
ctgcagttctcccggacgcagcaggaccctgcccacaggttagccccgggccagggggag
cagtcaggctaccagcaggtccctgtgctccagaacaccaaacaggctataggggtgata
agcggagctgtgtacgacgatgctgagatggatgctcttgctgagatcgagaggatagaa
cgagagacgctcatagaaagggagcgctgctccaaagaggttcaggataaagacaagcca
ctgaagaagcggaagcaggactcgtatccccaagagcctggcgctggaggtacagcgggg
gcaactcagcctggtgtgggagggggcaatgctggcagcaagttggcaccccaggaggct
agtgcagccagtaatggtgccagccggccagccctaatggtcagcatcgacctgcagcaa
gcaggcagagctgacgggcagccagaggtgaacatgggcacccccaccccagccgtggag
gcccggcgctggcccgaggaacgcctgggtccagaggacggctccgactctaccggagtc
ctgcggctaaagtccaagacggatggagagcgactacagactgcagacggccggccagag
gtcatcaagcagcgcgccgacacccccaagaagctgggccccgatggccggccggagacc
cctaaacacaagcacgaaaacagaagagactcgtccaaacacagacacgacggaaaacct
gacaatggcaaggcccgacctgacagcaggacgcctgacacgccacgacaacggcacgag
ggccgctcagactctggtcacagggaagacaggtcccgggacaacgacccatcccgcatc
cgcaggccagagacccccagcaagtccagcaggggggaacacgactccaaacatggacgg
gacagagacagggagcgggcggataaagacagggagaggaaacacaggacagaggcaggg
gaaccacgggaccgtcggtctccagagcaacgctccaggccagagagcccgcgggttaag
caggagggccgagggggggtggaccccagtgggcgccagaggactgaccggccatgcccc
aacctcaaaccccctaataaagaggagaggaggagcggggaggagaggaggagcggggag
gagaggaggagtggggacggcagcaggaaccgacaggactccaagcagcaaccgcagcct
gctgaaagcaaacaggagttccctgcctacctgctagggggggtaaagtctggaggcttt
aagaactttgtgattcccaagatgaagcgggataaggatgggcatgtgttggcagctgag
atgaggaagcatgggtctggtctggggcctgtaatggagggctggagcgagccccgggtc
aagctggagcgactggggctggtagaggagatgaagacaggagccaaacctgttgtggtg
ctgcagaaactcagcatcgacgaggtgcagaaaatcatcagggaaagggaggacaggaac
gcacgcggctccaagtcctccaagagcagacactgtcatgaaaagtctgggaaaggaggt
cttgatgaatcagtgttgaaagaactgcctcctcatctcattgctgagatagagtccacc
atgccactgtgtgagagagtgaagatgaacaaacgcaagcgcagcaccgtcaacgagaag
cccaagtacgccgaagtcgactccgacgactcagacgacgactctgtgacggagtctgca
cggaagcgtcacaagaaggagcgagaaaagacgtgggagcctgatgagcgggagaggaga
ggctcaggagagcaccggaggagtagttggggctcccaggagcggcgcaagggatccggc
aggcgctaccgagaacgcagcccagaggaatcggatgaggaatccccaccacccagtatg
agtgaccttgccagaaagatgaagaagaaggagaaacagaagaagaggaaggcatacgag
cccaagctgacaccagaagaattgatggactcctccacgttcaagaggttctcagccagt
gtggacaacattctggagagcttggaggacattgacttcaatgccatggatgatgatgag
atcccacaggagcttttgctggggaaacaccagctcagtgagctgggcagtgaatctgct
aagatcaaggccatgggcatcaccttcaggcttccatctgataagttggtgaaggtcctg
aacatcctggagaagaacattcaggacggttccaagctctccacactgatgaaccatgac
gcagacgcagaagacgaggagcggctgtggcgtgacctcatcatggagcgcgtgaccaag
tcagctgacgcctgtctgacggccctcaacatcatgacgtcgtcccgcatgcccaaggcg
gtgtacatcgaggacgtgattgagagggtgctgcagtacaccaagtttcacctgcagaac
actctctaccctcagtatgaccctgtctacagagtgaaccctcatggaggtggctatctg
agctccagggctaagagggctaaaagctccacacacaagcagagggtgatcatcatgctc
tacaacaaggtgtgtgacatcgtcagcaacatctctgagctcctggagatccagctgttg
acggacaccaccatcctacaggtctcctccatgggcatcactccattctttgtggagagt
gtcagtgagctacagctgtgtgccatcaaactagtgactgcggtgttctctcgctatgag
aagcacaggcagctcatcctggaagagatcttcacctctctggccagactacccaccagc
aaacgcagcctcaggaacttcaggctgaacagcagtgataaggatggggagcccatgtac
atccagatggtcacagctctggtgcttcagctcatccagtgtgtggtgcacctccccaac
aacagggacagtcacgacgatgagtacaacaagaaggtggatcaagatgtcctgatcact
aactcttatgagacggccatgagagcagctcagaacttcctgtccgttttcctaaagaag
tgtggcagtaagcagggagaggaggactaccggccgttgtttgagaactttgtccaggac
ctgctgtctacggtgaacaaaccagagtggccagcttcagagcttctcctcagtctgctg
ggacgtctactggtgcaccagttcagtaataagcagacggagatggctctgagggtggca
tcgcttgactacctgggcacggtcgctgcccgcctgcggaaagacgcagtcaccagccag
atggaccagcgcaccattgaccgcatcctcaaagagacccaaggcaatgatgagacccag
cagctacagaaagccctgctggattacatggatgagaacgcagagacggatccatctcta
gtttttgccaggaagttctacatagctcagtggttcagagacactttgacagagacagaa
aaagccatgaagtctcagaaccagcgaggggacgaggactcttctgaaggccagcaccac
gccaaggacatcgagagcaccggcgagatcatgcagagagctgaggcccgcaagaagtac
ctccgcaacatcatcaagaccgcgccctcgcagttcagcacattgaggatgaactctgac
actgtggactatgacgactcctgcctgattgtcagatatttggcctctatgaggccgttc
gcgcagagcttcgatatttatttaacacagatcctgagagtgctgggggagagtgccata
gctgtcagaactaaagccatgaagtgtttgtctgaggtggtggctgtagaccccagtatt
ctagccaggttggacatgcagcgcggggtccatggtcgtctgatggacaactccaccagt
gttcgcgaggctgcagtggagctgctgggacgctttgtgctgagcagaccccagctcaca
gagcagtactacgacatgctgatcgagagaatactggacacgggtatcagtgtgaggaag
agggtgatcaagatcttgagagacatctgtctggagcaacccactttcaacaagatcact
gagatgtgtgtcaagatgatccgcagggtcaacgacgaggagggcatcaagaaacttgtg
aatgagaccttccagaaactctggttcacccctacacccaatcacgataaagacgccatg
acccgtaaaatcctcaacatcacagacgtggtgtctgcatgcaaagatacaggctatgac
tggtttgagcagctgcttcaaaacctgctgaagacggaggaagatgcttcctataaacca
gccagaaaggcctgcgttcagctggtggacaatctagtggaacacatcctcaaatacgaa
gagtctcttgctgatatcgagaacaagggggtgaactccaatcgtctggtgtcttgcatc
accaccctcttcctgttcagtaagaatcgagcccagctgatggtcaaacatgccatgacc
atgcagccttacctcaccaccaagtgcaatacccagagtgacttcatggtgatctgtaac
gtggccaagatcctggagctggtgatccctctgatggagcacccctctgagaccttcctc
accaccatagaggaagacctgatgaagctcaccatcaaatacggcatgacggttgtgcaa
cactgtgtgagctgtcttggagctgtcgtgaaccgggtcactcacaactacaagtttgtt
tgggcttgtttcaaccgttactatggtgccctgaccaagctgaagacccagcactcagag
gattgcaacaaccctgttctggctgctaataaaccggccttgctgcgttcgctgttcact
gtgggggcgctctgtcgccactttgactttgaccaggaggagttcaagggccccagcaag
gttgtgataaaggacaaagtgatggaacttctgctgtacttcaccaaacatgaagatgag
gaagttcagaccaaggccatcattggtctaggcttccagttcatccagtacccagggctg
atgttcatgcaggatgtgaagagtctttacaatggcatcctgtcggacaggaagagctct
gtcaacctgaagatccaggtgctgaagaacctgcagacatacctgcaggaggaggattct
cgcatgcaggaggccgaccaacagtggaagaagctgtcgaagcaggaggacctgaaggag
atgggggacatctcgtcaggcatgagcagctccatcatgcagctgtacctgaagcaggtg
ctggaggccttcttccacacactgtccaacgtacgacactttgccctcaacgtcatcgcc
ctgacactcaaccagggcctcatccatcctgtgcagtgtgtgccctacctgattgccatg
ggaacagacccagagcccaccatgaggaacaaggctgaccagcagctggtggagattgat
aagaagtacactggcttcatccatatgaaggccgtggcggggatgaagatgtcctaccag
gtacagcaagctatctggtcagctaagggtacggtgatccgtggctaccggcaggacgag
accacctcggccctctgcgcccacctcttctctatggtccgatccaaccggcagcaccga
cgagccttcctcatctcactgctcaacctgtttgatgacagctcgaagatggaggtaaac
atgctcctgtacatagcagacaacctggcctgtttcccctaccagagccaggaggagccc
ctgttcatcatgcaccacatagacatcaccctgtcggtgtccggcagcaacctgctgcag
tccttcaaggagtcccttctcaaagagccgaggcggcgggagaagaagcagaaagagagg
aagtaccactcggaggaggataactctgaggaagagaacgaggagcgtcacagcagccgc
tccaacagcagtgacgaggacgatgaggtggtccacaggcccaagaagcccaaacaccgg
gcccaggcccacgtggagtctgactctgactctgacctggagatggaggacttggacaag
gtgatgcagcgtctgcctgacaaccccatccccctgttggactttgccaacgcctcgcag
ggtatccttctgctgttggttctcaagcagcacctaaagaacctctatggcttctcagac
agtaaaatccagaagtactctccgacggaatcggccaaggtgtacgagaaggctgtaaac
aggaagagtcatgtgcacttcagcccacgccagactttggactttttaacctctgacttg
gccaacgttgaactgacctacgacatcaagaggaggatcgtcaaacagtacctagatttc
aagttactgatggagcacttggaccctgatgaggaggatgaggaaggtgaggcgtcggcc
agcgctaacgccagaaacaaagccatcacttcactgctgggagggtccagccaccaggac
cacaagaaccaccaccaggctcctattgagacggacgacgacgagagcgacggagacgag
aaaaccccagggtcatcacgaagatccaggaagcacggtgactctgcggaggcatcaggt
cacatgaacgagacagtaggttccatggacgtcatcgccctctgctgccccaagtacaag
gaccggccacagatcgcccgcgtcatccagaagaccaacacaggctacagggtgcactgg
atggctgggtcctactctggagtctgggctgaggcgaagaaacgggacggacgcaaaact
gtgccttgggtggacactatcaaggagtcggacattatttacaagaaaatacccttgacg
agtgcacacaagctgacgaacagagtggtgcagactttacggtcactgtactcagccaag
gacggaacttcctaa
DBGET
integrated database retrieval system
