Salmo salar (Atlantic salmon): 106563902
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Entry
106563902 CDS
T04363
Symbol
grik1
Name
(RefSeq) glutamate ionotropic receptor kainate type subunit 1
KO
K05201
glutamate receptor, ionotropic kainate 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04080
Neuroactive ligand-receptor interaction
sasa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106563902 (grik1)
04082 Neuroactive ligand signaling
106563902 (grik1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106563902 (grik1)
Ion channels [BR:
sasa04040
]
Ligand-gated channels
Glutamate (ionotropic)
106563902 (grik1)
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Motif
Pfam:
ANF_receptor
Lig_chan-Glu_bd
Lig_chan
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
106563902
NCBI-ProteinID:
XP_013985327
UniProt:
A0A1S3L2Z1
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Position
ssa11:complement(90291544..90322334)
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AA seq
847 aa
AA seq
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MINVKLHYGTMERRKSLFTWLVLFTVQFSRSSQQVLRIGGIFETRESELVSVEELAFKFA
VSNINRNRTLMPNTTLTYDIQRINLFDSFEASRRVCDQLALGVSAVFGPSHSSSVSAVQS
ICNALEVPHIQTRWKHPSVDNRDTFYINLYPEYTAISRAILDIVTFFKWKSLTVVYEDST
GLMRMQELIKAPSKLNLKIRIRQLPPGEIDARPLLKEMKKDKEFYILFDCSYRTSAEILK
QLSSMGMMTEYHHFFFTTLDLFALDLEPYRYSGVNMTGFRLLNIDDPYVASTMEKWSLER
LQAPPKQESGLMDGVMTTEAALMYDAVFMVAVASQRATQMTVSSLQCHRHKPWRFGPRFM
NLFKEAQWDGLTGHIVLNKTDGLRRDFDLDIISLKEDGTARGFVEGSSRLTKRWSKIAVW
NSYTGLNLTETSRDKTNNVTDSMANRTLIVTTILENPYVMFKKSDKELSGNDRFEGYCLD
LLKELSNILGFTYEVKLVSDGKYGAQNDKGEWNGMVRELIDHIADLAVAPLTITYVREKV
IDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACTGVSCVLFVIARFTP
YEWYNPHPCNPSSELLENNFTLLNSFWFGVGALMQQGIKSKISTYEKMWAFMSSRKNTAL
VKNNREGITRVLTTDYAMLMESTSIEYISQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDK
VTIAILQLQEEGKLHMMKEKWWRGNGCPEEDNKEASALGVENIGGIFIVLAAGLVLSVFV
AIGEFIYKARKNSDIEECVSFSSVMEELGISLRCHKTIRRRSRPRGRSGLASVLCHPKRI
PRKETMA
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgattaacgtaaagttgcattacgggactatggagaggaggaagagcctgtttacctgg
ctggtactcttcacggtgcagttcagccggagttcacagcaagtactcagaataggtggt
atctttgagactcgtgagagtgagttggtgagtgtagaggagttggcctttaagtttgca
gtgagcaacattaacaggaaccggaccttaatgcccaacaccactctgacctacgacatc
cagagaatcaacctcttcgacagcttcgaggcctccaggagagtgtgtgaccagttggct
ctgggtgtatctgcagtgtttggtccgtcccacagctcctcagtcagtgctgtccagtcc
atctgtaacgccctggaggtaccccacatccagacgcgctggaaacacccatcagtggac
aacagagacacgttttacatcaatctctacccagaatacactgccatctccagagccata
ctggacatagtgaccttcttcaagtggaagagcctaacggtggtctacgaggatagcaca
ggtctgatgcggatgcaggagttgatcaaggctccgtctaagttgaacctgaagatcagg
atacggcagcttccacctggagagattgacgccagacctcttctgaaggagatgaagaaa
gacaaagagttctatatcttgtttgactgctcctaccggacctctgcagagatactcaaa
cagctctcgtcgatgggaatgatgacagaataccatcatttcttcttcactacattggat
ctgtttgcgttagacctggagccataccgctacagtggcgtgaatatgacaggtttcagg
ctgttgaatatagacgacccgtatgtagcttccaccatggagaagtggtctctggagagg
cttcaggctccacctaaacaggagagtggattaatggatggagttatgacgacggaggca
gcgttgatgtatgacgcggtgttcatggttgccgtggcgtcgcagcgagccactcagatg
actgtcagctccctgcagtgtcaccgacacaaaccctggcgctttggaccgcgcttcatg
aacctcttcaaagaggcccagtgggacggtctgacaggtcatatagtccttaataagaca
gatggtctgaggagagactttgacttggacatcatcagtctgaaggaagatggcacagcc
aggggctttgttgaaggctccagtcgcctcactaaaaggtggagcaagattgcggtgtgg
aactcctacacaggtttgaaccttacagagaccagcagggataaaaccaacaacgtgact
gactctatggccaacaggactctgatcgttactactatattggaaaacccttatgtgatg
tttaagaagtcagacaaggagctgtctggcaacgaccggtttgagggttactgccttgac
ctgctgaaggagctgtccaacatcctggggttcacctacgaggtcaaactggtgtctgat
gggaagtatggtgcacaaaacgataagggggaatggaacggcatggtccgagagctcatc
gaccacatagctgacctcgctgtagcccctctgaccatcacatatgtgagagagaaggtg
atagacttctctaagcccttcatgaccttgggaatcagtatcctgtacaggaaacccaat
ggcaccaaccccggagtgttctccttcctcaacccactgtctcctgacatctggatgtat
gttctactggcctgcaccggagtgagctgtgtcctgtttgtcatcgccagatttactccc
tatgagtggtacaaccctcacccctgcaacccctcgtcagagttgctagagaataatttc
accttactcaatagtttctggtttggagtgggagctctcatgcagcaaggtattaaatct
aagatctccacctatgagaagatgtgggcgtttatgagcagcaggaagaacacagctctg
gtgaagaacaacagagaggggatcaccagggtcctgaccacagactacgctatgctgatg
gagtctaccagcatagagtacatcagtcagaggaactgtaacctcacgcagataggagga
ctcatagactccaagggctacggagtgggcactcccataggctccccttacagagacaag
gtgaccatcgccatcctgcagctgcaggaagaagggaagctccacatgatgaaggagaaa
tggtggagagggaacggttgtcccgaggaggacaacaaagaagccagcgcgttgggcgtg
gagaacattggtggtatcttcatcgtcctggcggccggactcgtcctgtctgtgttcgta
gccatcggagagttcatctacaaggccaggaagaactctgacatagaggagtgtgtctct
tttagctctgtcatggaggagctgggtatctccctgcgctgtcacaaaaccatcaggcga
aggtcacgaccccgaggacgatctggattggccagcgtcctctgtcaccccaaacgcatc
ccgaggaaagagaccatggcgtag
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