Salmo salar (Atlantic salmon): 106563937
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Entry
106563937 CDS
T04363
Symbol
ddx52
Name
(RefSeq) DExD-box helicase 52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sasa03009
]
106563937 (ddx52)
Enzymes [BR:
sasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106563937 (ddx52)
Ribosome biogenesis [BR:
sasa03009
]
Eukaryotic type
90S particles
Helicases
106563937 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
106563937
NCBI-ProteinID:
XP_013985366
UniProt:
A0A1S3L333
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Position
ssa11:complement(92552155..92589476)
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AA seq
637 aa
AA seq
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MDAFDLFRKLGAGAKFDFKRFGKDAERFKVVRSQEKDVTDHYGIDFFGTGVTHGNQEQRE
EEEEKHEEGDAVAGKRKGQDEEKTAKKRKEDDKAEVARGETEGILWTSSADRKSKGLKEG
RDRDKTSMKRLQHLHQEKVNRVRTQHRINVHGCDVPDPVCTFSELQSEYGLNPRVLQNLS
AAGLTVPTPIQMQAIPLMMHGRELLACAPTGSGKTLAFCLPLLTHLKQPANLGIRALVIS
PTRELASQTHRELVRLSEGVGFRVHILDKASMAARKCLPSSINKSDILISTPNRLVFLLK
QNALDLSSVEWLVVDESDKLFEDGRSGFRDQLAAVFQGCSSPRVRRALYSATCAPDVEQW
CRLNLDNLVSVNIGHRNSAVETVEQKLLFVGTENGKLLAVRDIIKKGFLPPMLVFVQSID
RARELFHELVYEGINVDIIHADRTQQQRDNVISSFRSGDIWVLICTALLARGIDFKGVNL
VLNYDFPTSAVEYIHRIGRTGRAGRTGRAVTFFTEDDKPLLRSIANVIKQAGCPVPGYMV
GFKKIHSKVKRQLQKKPPKRSSIRTTPQFVLKKGRGGEKTGGGGAEGQKRRKKKGGLGGP
KKGADGQETKGDEGQKSSVGVQSKVQGTRKNKKGKKN
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttcgatctgtttcgtaaactcggagccggagcgaaatttgatttcaagagg
tttggaaaagatgccgaacgatttaaggtggtgaggtcccaagagaaagatgtaactgat
cactatgggatcgactttttcgggaccggagtaacccacggcaaccaggagcagagagag
gaggaggaggagaagcatgaagagggagatgctgttgcagggaaaaggaaaggacaagat
gaggagaagactgcaaagaagagaaaggaagatgataaggctgaagtggcgcgtggggag
accgagggcatcctgtggacttcctctgcagacaggaagtctaaaggcttgaaggagggg
agggacagagacaagacatccatgaagagactccaacacctccaccaagagaaggtgaac
cgtgtacgcacgcagcaccggatcaacgtgcatggctgtgacgtgcctgacccagtgtgc
acgttctccgagctgcagtccgagtacggcctgaacccacgcgtcctccagaacctgtcc
gcagctggactcaccgtccccacgcccatccagatgcaggctatacccctgatgatgcat
ggtcgtgagttgttggcatgtgctccgacaggttcggggaagactctagcgttttgtctc
cctctcctgactcacctgaaacagcctgctaacctcggcatcagagctctggtcatctct
cccaccagggaactggccagccagacccacagggagttggtgcgtctgtcggagggtgtt
gggttcagagttcacatactagacaaggcctccatggcagccaggaaatgccttcccagc
tctatcaacaaatctgatattctgatcagtacccctaatagactggtgttcctcctgaag
cagaatgctctggacctcagcagtgtggaatggctggtggtggatgagagtgataagctg
tttgaggatggtcgtagtggcttcagagaccagctagcagcggtgttccagggatgttct
tccccgcgggtcagacgagcgctctacagcgctacctgcgccccagacgtggaacagtgg
tgtcgcctcaacctcgacaacctggtctctgttaatattggacacaggaactctgcagtg
gagacagtggaacagaaactgctgttcgttggaacagagaacggcaagttactggccgtc
agggacataatcaagaagggtttcttgcctcctatgctggtgtttgtccagtctattgat
cgagccagagagcttttccatgagctggtctacgaaggcatcaacgtagacatcatacac
gctgaccgcacacagcaacagagagacaacgtgatcagtagtttccggtctggtgatatc
tgggtgttgatctgtacggccctgctggcccgaggaatcgactttaagggtgtgaacctg
gtgctgaactacgacttccctaccagcgctgtggagtacatccaccgcatcggtcgtact
ggcagggcgggacgcacgggaagagctgtcaccttcttcaccgaggatgacaagcctctt
ctacgcagtattgccaatgtgatcaagcaggcaggttgtcctgtccctggctacatggtt
ggctttaaaaagatacacagtaaagtcaaacggcagctccagaagaaaccaccgaagagg
agcagtatccgcaccacccctcaatttgttctgaagaagggaagaggaggagagaagact
ggaggaggaggagcggaaggacagaagagaagaaagaagaaaggaggactgggaggccca
aagaaaggagctgacggacaggagacgaagggagacgaaggacagaagtcgtctgttgga
gtccagtctaaggtccaggggacgaggaaaaataagaaaggaaagaagaactga
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