Salmo salar (Atlantic salmon): 106564115
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Entry
106564115 CDS
T04363
Name
(RefSeq) putative RNA exonuclease NEF-sp
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106564115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sasa03009
]
106564115
Ribosome biogenesis [BR:
sasa03009
]
Eukaryotic type
Pre-60S particles
RNases
106564115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-GeneID:
106564115
NCBI-ProteinID:
XP_013985586
UniProt:
A0A1S3L3Q0
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All DBs
Position
ssa12:complement(3373343..3378025)
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AA seq
442 aa
AA seq
DB search
MDPQVCLERNGEPSPTPESSKQVKETELNGVPESEHRSGSRPPRLSLPFDRLQEPVTLKD
LTELLQFAALGNTGGLKQPSWCRLHHQRKVSGVSVILLEGLSQAHFYRHYLHFKHLRTKY
ISRRSYTPSPGNVISGIFSSEVVNNSPADALGEQKSAQPEGGLRWHPVIRKFGLETRGLT
GYLLTQEDMIKKHFPVRGMPGSEGFVCIDSDDCVTDSSPLYGLDCEMCLTEWGNELTRIS
LVDSRGSCVLDELVKPPNRILNYLTQFSGITRAMLQPITTTLREVQSKLKKVLPRDAVLV
GHSLDNDLMALNLIHPHVIDTSLLYRREFGQRFKLKVLAETVLKKQIQTEERKGHDPTED
AQAALELAQYFIHTGPRQVVELYCEELWGGSPTMYQPPVNRETSTHNNNRYDQQTLPLFS
ICGSSCISLEAKETHLFRRGTG
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggatccacaagtctgtctcgagagaaatggggaaccttccccaacaccagagagtagt
aaacaagtgaaagagacagaacttaacggagttccagagtctgagcaccgttccggttcc
cgacccccacggctctctctgccgtttgaccgtctccaggaaccggtcacgttgaaagat
ctgacggaactgcttcagtttgctgctctggggaataccggtgggctgaaacaacccagt
tggtgtcgcctccaccaccagaggaaggtatcaggggtgagcgtgatccttctagaagga
ctgagccaggcccacttctacagacactacctgcacttcaaacacctccgcaccaagtac
atctctagacgcagttatactccatcgcctggcaacgtgatttctggaatattcagcagt
gaagttgtcaacaatagtcctgctgatgcgctaggagagcagaagagtgctcagccagag
ggaggtctgcggtggcacccagtgatcaggaagtttggtctggagaccagagggctgact
ggatacctcctcacccaggaggatatgatcaagaaacacttccctgtccgcggtatgcct
ggcagtgagggctttgtgtgtatagacagtgatgactgtgtgactgacagtagtcctctc
tatgggctggactgtgagatgtgtctgacagaatggggcaacgagctgacgcgtatttct
ctagtagacagcagagggagctgtgttctggacgagctggtcaaacctcccaaccgcatc
ctcaactaccttacacagttctctggtatcacccgtgcaatgctgcagccaatcaccacc
accctaagagaagtccaatcaaagctcaagaaagtgttgccccgggacgcggtcctggtt
ggccactcccttgacaacgacctcatggccctgaacctgatccacccccatgtgattgat
acctccctgctgtacaggagagagtttggacagaggtttaaactcaaggtgctggctgag
actgtgctcaagaagcagatccagacggaggagaggaagggtcatgaccccacagaggac
gcccaggctgccctggaactggcccagtacttcatacacactggaccacgacaggtagtg
gagctgtattgtgaagagctgtggggtgggagtcctaccatgtaccagcctcctgtcaac
agagaaacatctacacacaacaacaacaggtacgaccaacaaacccttcccctcttttcc
atatgtggttcctcttgtattagcctggaggcgaaagaaacacacctgtttaggagaggc
actggctag
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