Salmo salar (Atlantic salmon): 106564258
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Entry
106564258 CDS
T04363
Name
(RefSeq) atherin-like
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106564258
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
106564258
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
106564258
NCBI-ProteinID:
XP_013985777
UniProt:
A0A1S3L486
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Position
ssa12:complement(7443226..7452961)
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AA seq
728 aa
AA seq
DB search
MWPTQAHIEVSVLHSPLCRARSLLALGRCRRASYSVTSGTTREKRRTRPNPNSTAGKTTT
KMSESKYRDWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTREELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKSRKKSDLTPGSGGGSEVEGEQAKHSSLNNGDSAHSFTDLEEV
ESRDREEDSVSEPSECPDPRPETPGITSEKKLKLFPLNSGNGPGYCPGCGETGCAAGRGC
SGKASASKDKRLGERGGGGQEGGGSSPLAGNHETKPGQDGSGAPSKAKGVWGGAGGVQTE
GQEGSSSCVGVAAETENNIGQGSANSSSSSNSHLLRPKQLQPASPPVKPKLRAGRGEGNP
WVGGSGQTSSDLGERLIASVRRLAEQNRASALRGETRGGHKPLGLKEILGYLTSQDGLSS
EGKLTRNRVKVVLEREVARGRLRRTRCGNITLPVRGVEAAPAPAKPPGPANRLLKSSLQD
KHIGNKEVKEEEPMETESGEEEEDEEEKGTGDAEDGGQSDTQTSGGEEGSKGVTCPSPVP
METEPRNGDDITGGSEGQAGVKQEDKQPEHTTNTVSPDQIHTDTQNQNQNVVQSERESHT
SSVHNHNSGSACKTEVGVSSCLLTPTASPRDSGLAEDRGMNGGLFVKSELGSLNPVNWTV
SDVVSYFTSAGFPEQALAFRTQEIDGKSLLLMQRNDVLTGLSIRLGPALKIYERHVKVLQ
RTHFEEDD
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtggccaacgcaggcgcacatcgaggtttccgttcttcattctccgctctgccgggct
cgctctctgctcgcactgggtcggtgtaggagagcgtcttacagcgtcacttcaggaaca
acaagagagaaaagacgcactcggccaaacccaaactcaaccgctgggaagacaacaaca
aaaatgtccgaatccaagtaccgggactggatcctcgagaccatcgactctctacgctca
cggaaagcccgaccggaccttgagagaatatgtcgtatggtccggagaagacacggctcg
gatccagacagaacccgggaggaactggagaaactgatccaagagcaaacagtgctcaaa
gttagctacaagggctccatatcctacaggaatgcggcgaaggtgcagagaaagagtcga
aagaagagtgacttgacgccgggtagcggcggcggtagcgaggtggagggagagcaagcc
aaacactccagtttgaacaacggggacagcgcgcacagctttaccgacctagaggaggtg
gagagccgggaccgagaggaggattctgtctcggagccgagtgagtgccctgacccccgg
cccgaaaccccgggtatcacctccgagaaaaaactaaagctttttccactgaatagcgga
aacggccctggctattgcccgggttgtggtgaaacgggctgtgctgccgggagaggctgc
agtgggaaagcaagtgcgtcaaaagacaagagattaggagaaagaggaggaggagggcag
gaggggggtggcagcagccctttggccggcaaccacgaaacaaaaccgggtcaagatggg
agcggtgctccgagcaaagcaaagggggtctggggtggagcagggggggtgcagacggag
gggcaggagggcagcagtagctgcgttggtgttgctgctgaaacggaaaataacattggc
cagggaagcgccaattcaagttccagcagcaacagccacctcctgcggccgaaacagctt
cagccagcatccccacctgtcaaacccaaactccgggccggccgaggtgaggggaacccg
tgggtcgggggcagcgggcagaccagctcggatttgggcgaaagactgatcgcctccgtc
cgcagactagccgagcagaaccgagcctccgcgttaagaggggagacccgcgggggccac
aagccactgggactgaaggagatcctgggttacctgaccagccaagacggcctctcatct
gagggtaagctgacccgcaacagggtcaaggtggttctggagagagaggtggcgagaggt
cggctgcggaggacccggtgtgggaacatcactctcccggtgaggggagtggaggcagcg
ccagccccagcgaagccacccggccccgctaacagactgcttaagagctcactgcaggat
aaacacattgggaataaggaggtgaaagaggaggagccaatggagacagagagtggagag
gaggaggaggatgaagaggagaagggaacaggggatgctgaggatggggggcagagtgac
acccaaacctcagggggtgaggagggttctaagggggtgacttgcccttccccggttccc
atggaaacggaacccaggaatggtgatgacatcactggaggttctgagggacaggcgggg
gtgaagcaggaggacaaacaaccagaacacacaaccaatactgtctctccagaccagata
cacacagacacacagaatcagaatcagaatgtggtacagtcagagagagagagccacact
tcctctgtccacaaccacaactcaggttcagcctgtaagacagaggtgggtgtgtcctcc
tgtctcctcacccccaccgcctcacctagagactctggtctggcagaggacagaggcatg
aacggaggactgtttgtgaagtctgagctgggcagtctaaacccagtcaactggacagtg
tctgacgtggtcagttacttcacgtcagcagggtttccagaacaggccttagccttcagg
actcaggagatagatgggaagtccctcctcctgatgcagcgtaatgatgtcctgacaggc
ctgtcaatcaggctaggccccgccctgaagatctatgagcgccatgtgaaggttctgcag
agaacacactttgaagaggacgactga
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