Salmo salar (Atlantic salmon): 106564355
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Entry
106564355 CDS
T04363
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like
KO
K17963
peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sasa03029
]
106564355
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
106564355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
106564355
NCBI-ProteinID:
XP_013985889
UniProt:
A0A1S3L5V2
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Position
ssa12:complement(9181802..9200817)
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AA seq
1361 aa
AA seq
DB search
MAAQWRRKDEHIITGNTDFLTANTFNEAVLGKGEVSDLEMDTHSCLDPSILAMFEDSAVA
AETRSRLDEESEATLLTALTEILDSVDDETLSPFDTLPDTGLFSDQRLRDNSPLRRLLSL
TRSPPDKEALFRSIKTPSSSSSPSSSVGKVETVITDRPRRARLTPRAQGSSTSIQRSDGE
EEERSDTEEEEGGKVHIHSPPRGFNLTNQDSGELSLDQSEVRALNSVEKDHGYSSTVSLV
DLVKLMHPYCLRVCLDEEGKDWIGTSRQEASSLGEWSADQRVPLEGEVWRYTKPGSEESD
EEIDVDGSDDECPSGGGMKNEKGGDGEQGSKGEEVKQLKSLLVKWDGPKEGQKTKNKKRV
SFGPVLVTSYELPETDELDLNVLPDLSELTSQIPIFDFNTKTMTISLTTSSPESSAASSK
DNQHPVETGLPERTGDKSSEPPPQQGESKPRPALSLQQYRLLRQQKRLPLVVKPENYTTK
WPSLPETPKELPPIPYLQGPKYNVWGPTTTHHYIGSKTGDDVSGFKPISKTRTKIVSPAC
PSKPGKGIGINGSKPVRSGTKTSPASSALKPKCSSMEAKSANYVGVLKPIWTETISPASP
LPSPNLNSNSVAGLGQNRTSPEKSAVAISSDPPNPVLVPLPGTRPSLDGFDRSHGTNQEK
QEQEQSLPLSTTQESPAPKPKMVFCNRDPSLKSTSLLLEIQRRFSTKQPLRKALHTQNTA
ETMKQGHQPRSLSPRKGIETVPEGSKFSPRAPVMASPSSRPSVHPPTNAVVAPYPEMERA
KRVALGNLPHVQLSTSPESNTCIQTPTCGTGIEATDLTSLLERFEETQAKEETESEPEGS
PDRSPVRDEELSNNTQGMLTLLGAYLLSTQEKLCVPEPASFPELVNTLGPLRTPEPLRAP
ERCDTQEPLSTQNVLSTQEQAPAQPRWKPLTPVAPQRKQPATPKPLPPKAIQIIDPRPLP
PKKAHPLPPKPPVTPPEFQTPVSFSSDHDYCLSQDQPGSNTTTLCSKRQTILTDHQPITN
PSLVPGTQNSGKYLRQQQPMDSRTVPETELPSDSAPPSTDSSPFRTDAITAGETQEERTS
PCIPSPPSPSPPARGRRSSRRYRTRSSCSDSSSRSPSSSSSSSSSSYSRSRSRSPPRKRF
CPRRSESSSSSSCSSSVSRSPVPCRYRLPYPQSWNRSRSTSKSWTQSGSRSRSRSPTTLA
YSRAQRWRDCYSSNNVRDSRKRKRQQDMRNQKLKAIDERRVVYVGCIQRTMMHTELRERF
SLFGEVEECTLHFRDRGDHYGFVTFYNMKDAFAAIENGYKLRRPDELPFDLCFGGRRQFC
KSTYADLDSNREEEDPTPAKSKEEELDFDTLLKQAQKGLKR
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcagtggcgtagaaaagatgagcatataatcaccggcaacacggactttctg
accgcaaacacattcaatgaggctgtcctgggtaaaggggaagtcagtgatctggaaatg
gacactcactcctgcctggacccttccatcctggctatgtttgaagactccgccgtagct
gcagagactaggagcagactggatgaggagagtgaggccacgttgttgacagctctaaca
gagatactggacagtgttgacgatgagaccctgtctccctttgacaccctgcctgacact
gggctcttctctgaccagaggctacgggacaactccccgttgaggcggctgctgagttta
acacggtctccacctgataaagaagcactctttcgttccataaagaccccctcttcatct
tcatccccctcttcctctgttggaaaggttgagacagtcattactgacagacccaggagg
gctaggctaactcccagagcccagggctcttccacatccatacagaggagcgatggagag
gaggaggaaaggagtgatacagaagaggaggagggcggcaaggtccacattcacagtccg
cctcggggcttcaatctgaccaatcaggactcgggagaactctccctcgaccaatcagaa
gtgagagcgctgaactctgtagagaaggaccatggctactcctctacagtgtccctggtg
gacctggtgaaactcatgcacccctactgcctgagggtgtgcctggatgaggaggggaag
gactggatcggcacatccaggcaggaggcctcctccctgggggaatggagcgcggaccag
agagtaccccttgagggcgaggtgtggaggtatacgaagcctggttcggaagagagcgac
gaggaaattgatgtggacggatcagatgacgagtgtccctcgggaggagggatgaagaat
gagaaagggggggatggagaacagggaagtaaaggtgaagaagtcaagcaactaaaaagt
ctacttgtgaagtgggatgggcccaaagaaggccagaagaccaagaacaaaaaaagagtg
agcttcggacctgtcctggtgacatcctacgagctaccagaaacagacgaacttgactta
aacgtgctcccggacttgagcgagctcaccagccaaatccccatttttgacttcaacacc
aaaacaatgaccatttccctcacaacatcctctccagagtcttcagcagcatcttcaaag
gacaaccaacatccggttgaaactggcttacctgaaaggaccggagataagtcgtcggag
cctccaccacagcaaggcgagtccaagcccagaccggccctcagtcttcagcagtaccgc
ctgctgcgccagcagaaaagactacccctggtggtgaaacctgagaattacaccaccaaa
tggccctctctacctgaaacccccaaggagttgcctcctataccctatttgcaaggacct
aaatataatgtttggggaccaacaaccacacatcattacataggaagtaaaacaggggat
gatgtcagtggattcaagcctatatctaagactaggacaaagattgtctctcctgcttgt
cccagtaaacctggtaaaggcattggcatcaatggatcaaagcctgtaagaagtgggact
aagacttctcctgccagctcagctttaaagcccaaatgcagctcaatggaagctaaatct
gctaattatgttggtgtattaaagcctatttggactgagaccatctctcctgctagtccc
ttaccaagtcccaacctgaactccaactcagtggcgggtctgggccagaacaggactagc
ccagaaaagagtgctgttgcgatcagtagcgaccccccaaaccctgtcctggtcccacta
ccaggaacccgtccatctttggatggatttgataggagccatgggaccaaccaggagaag
caggaacaggaacaatctctacctctgtccaccacccaggagtctccggcgcccaagccc
aaaatggtgttctgcaaccgggatccaagcctgaagagcaccagtctcctccttgagatc
cagcggaggttctccaccaaacaaccattgcggaaagcacttcacacccaaaacactgca
gagaccatgaaacaagggcatcagcctcgctctctcagcccaaggaaagggattgagacc
gtaccagaagggtccaagttttccccaagggcaccagtaatggcaagtccgtcctccaga
ccctcagtccatccacccaccaatgctgttgttgctccttacccagagatggagagggca
aagcgggtagcccttgggaacctcccccatgtccaactgtccacctctccagagagtaac
acctgcatacagacccctacctgcggcacaggaatcgaagccacagatctgaccagcctt
ctggagcggtttgaggagacacaagccaaagaggagactgagagtgaacctgaaggcagt
ccagataggagccctgttagagatgaagagctgagcaacaacactcaagggatgctgaca
ctgctgggtgcctatctcctcagcacccaagaaaaactctgtgttccagaacccgctagc
tttccagaacttgtcaacacacttggacccctcagaactccggaacccctcagagctccg
gaacgttgcgatactcaggaacctctcagcacccagaatgttctcagcactcaggaacag
gcccctgcacagccgcgctggaaaccgcttacccctgtcgcacctcagaggaagcaaccg
gcaacccccaaacctctccctcccaaggccatccaaatcatcgacccccgtcctctacca
cccaaaaaggcccaccccctccccccaaagcctcctgtcaccccccctgagttccagaca
ccagtatctttctcctcggaccatgactactgtctatctcaggatcaaccagggagtaat
actactacgctatgcagcaaaagacaaacgatactcaccgaccaccaaccaatcaccaac
ccctccttagtgcctggcacgcagaactctgggaaatatttgcgccagcagcaaccaatg
gactccaggactgttccagagacagaacttccctcagactctgctccgccatctacagat
agctccccctttaggacggatgccattactgcaggggagacacaggaagagagaaccagc
ccctgcatcccttcccctccttcacccagtccccctgccagaggtaggaggtcgtcccgg
cgctatcggacaaggtcttcatgctcggactctagctctaggtccccttcttcatcatca
tcttcctcatcctcctcctactctcgatccaggtctcgctctccaccccgaaagaggttc
tgtcccaggcgttctgaaagcagctcctcatcctcttgctccagctccgtctcccgttcc
ccggttccctgccggtaccggctcccctacccacagtcctggaaccgctctcggtccaca
tcaaagtcctggactcagtctggttccagatctaggtccaggtcccccaccacactggcc
tacagcagggcccagaggtggagggactgctacagctccaacaacgtcagggactccagg
aagcgaaagagacaacaagatatgaggaatcaaaaactaaaagccatagacgagcgcagg
gtggtgtacgtgggctgcatccagaggaccatgatgcacacggagctgagagaacgcttc
tctctgtttggagaggtggaggaatgcaccctgcactttagagacaggggcgaccactac
ggctttgtgacgttctacaacatgaaagatgcgttcgcagccatcgagaacggctacaag
ctgaggagacctgatgagctgccctttgacctctgcttcgggggcaggcgtcagttctgc
aaatctacgtacgccgacctagattctaatcgagaagaggaggaccccactccagcgaaa
agtaaggaggaggagctggactttgacacgctattgaagcaggcacagaaaggcttgaag
cggtag
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