Salmo salar (Atlantic salmon): 106564512
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Entry
106564512 CDS
T04363
Name
(RefSeq) transcription activator BRG1-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106564512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106564512
03036 Chromosome and associated proteins [BR:
sasa03036
]
106564512
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106564512
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
106564512
Chromatin remodeling factors
BAF complex
106564512
PBAF complex
106564512
GBAF(ncBAF) complex
106564512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SnAC
Bromodomain
HSA
BRK
Helicase_C
QLQ
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
106564512
NCBI-ProteinID:
XP_013986111
UniProt:
A0A1S3L562
LinkDB
All DBs
Position
ssa12:14061795..14091937
Genome browser
AA seq
1791 aa
AA seq
DB search
MSTPDPPIGGTPRQGPSPGPGPSPGAMLGPSPGPSPGGSSHSMMGPSPGPPSLPQPGPSG
YSEENMHPLHKPLEGMERTTMERTAMERTAMERTGIERTTMERTGMERTGMERTGMERSG
MERTGMERTGMERTGMERTGMERTGMERTGMERTGMERTAMERTAMERTAMERTAMERTA
MERTAMERTSMERTAMERTAMERTVMERTAMERTGMHEKGMSEESRFAQMKGMPMRQGGH
SGMGPPPSPMDQHSQGYHSPLGGSDHSSPVPSNGPPSGPLQPSSAGPNPSDTSSNPDSQT
LGGQNQQQNRPGGPQQSGSGPGPHGPSPGPTTPGGPGGGPTPFNQNQLHQLRAQIMAYKM
LARGQPLPDHLQMAVQGKRPMGCSPGMQGPGPGQGGLGQPMPSLAPGGPGGVGPGQGPGG
PMGQGYSRAHGMMGPNMPPPGPSGPTGMQGQNPNGPPKSWSEGPMVNAAAPSNAPQKLIP
PQPTGRPSPAPPSIPPAASPVMPPQTQSPGQPVQPPPMVPHHAKQNRITPIQKPHGLDPV
EILQEREYRLQARITHRIAELENLPGSLAGDLRTKATIELKALQLLNFQRQLRQEVVVCM
RRDTALETALDAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLSIILAHAK
DFKEYHRSITAKIQKATKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQ
KKDKRLAYLLQQTDEYVANLTELVRAHKLVQALKEKKKKRKKKKLENAEGQTPVLGPDGE
PLDETSQMSDLPVKVIHVDSGNILTGADAPKAGQLDTWLEMNPGYEVAPRSDSEDSGSEE
EEEEEEEPQPAVPPVVVLPGLVGLEEKKKKIPDPDSEEVSEVDVRHIIEHAKQDVDDEYN
SAEAAFARGLQSYYAVAHAVTERVEKQSTILINGQLKQYQIKGLEWLVSLYNNNLNGILA
DEMGLGKTIQTIALITYLMENKRVNGPFLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSP
QARRAFIPQLRSGKFNVLLTTYEYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLN
THYLAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNE
EETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLL
TDGSEKDKKVRRNNSSTTKAEDRGMLLKAFNDPASQYFIFLLSTRAGGLGLNLQSADTVV
IFDSDWNPHQESFSEHLGFSGGIVSGLDLYRASGKFEVLDRILPKLRATNHKVLLFCQMT
SLMTIMEDYFAYRNFKHLRLDGTDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAK
YKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVGAPGGVWKSGGSWEEDEVPD
DETVNQMIARSEEEFDHFMRMDLDRRREDARNPRRKPRLMEEDELPTWIVKDDAEVERLT
CEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRHKKTTRKRKRDRD
DLPGPSSSSSGGRRSRDKDEDGKRQKKRGRPPAEKLSPNPPALTKKMKKIVDAVIKYKDS
SNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHRYRSLGDLERDVMLLFQN
AQTFNLEGSLIYEDSIVLQSVFTSLRQKIEKEEDSEGEDSEEEEEDLDEGSESESRSVKV
KIRLGRREKSSDRGKGRRRMGRTRAKPVVSDDDTEEEQEEERSPSGTDEES
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagaccctcccatagggggtacccctcgacagggtccttccccaggcccg
gggccctctcctggggcaatgcttggccccagccctggtccttctccaggggggtcctct
cacagcatgatggggcccagcccagggcctccatccttgcctcagcctgggccctctgga
tactccgaggagaacatgcaccctctacacaaaccactggaaggtatggagagaactacc
atggagagaactgcaatggagagaactgcaatggagaggactggaatagagaggactact
atggagaggactggtatggagaggactggtatggagaggacaggtatggagaggtctggt
atggagaggactggtatggagaggactggtatggagaggactggtatggagaggacaggt
atggagaggactggtatggagaggactggtatggagaggactggtatggagaggactgcc
atggagaggactgccatggagaggactgccatggagaggactgccatggagaggactgcc
atggagaggactgccatggagagaactagtatggagaggactgccatggagaggactgcc
atggagaggacagttatggagaggactgctatggagagaactggtatgcatgagaagggc
atgagtgaggagtcccgctttgcccagatgaagggcatgcccatgagacagggaggacac
agtggcatgggccctcctccaagccccatggaccaacactctcaaggctaccactcccca
ctcggcggctctgaccactccagccccgtcccttccaatgggcccccctctggccctctc
caaccctctagcgctggcccaaacccctcagacacctcctccaacccggactcccaaacc
ctggggggccagaaccagcagcagaaccggcccggtgggccccagcaaagtggctccggc
cctggccctcatggccccagtcctggccccaccacccctggtggccccggtggaggccct
actcctttcaaccagaaccagcttcaccagctgcgggcccagatcatggcctataagatg
ctggccagggggcagccactaccggaccacctccagatggctgtccaggggaagaggccc
atggggtgcagcccagggatgcaggggccagggccagggcaggggggactggggcagccc
atgcccagcctggctcctggaggtcctggaggtgtggggccaggacaaggaccaggagga
cccatgggccagggctacagcagagctcacgggatgatgggacccaacatgcctcctcca
ggcccctctggtccaacaggcatgcagggacagaaccccaacggaccccccaagtcctgg
tctgaaggtccgatggtaaacgccgccgccccctctaacgccccccagaagttgatccct
ccccagccaacgggccgtccctcccctgctccaccctccataccccccgcggcctccccg
gtcatgcctccccagacccagtcccctgggcagccagtccagcccccacccatggtgccc
caccatgccaagcagaaccgcattacccccatccagaaaccccacggactcgacccggtg
gaaatactgcaggagagggagtacagactgcaggctcgtatcacccatcggatagctgag
ttggagaacctccctggctctctggctggagacctgaggaccaaggccaccatagaactc
aaggccctccagctgctcaacttccagagacagctgcgtcaggaggtagtggtgtgtatg
cgtagggacacagctctggagacagctctggacgctaaggcctacaagaggagcaagcgc
cagtccctacgggaggcccgcatcacagagaaactggagaaacagcagaagatcgaacag
gagcgcaaacgtcgacagaaacaccaggagtatctgagcattatcctggcccacgccaaa
gactttaaggagtaccaccgctccatcacagctaagatccagaaagccaccaaggccgtg
gccacataccacgccaacacagagcgcgagcagaagaaggagaacgagcgtatcgagaag
gagaggatgaggaggctgatggctgaggatgaggagggctaccgtaagctgattgaccag
aagaaagacaagcgtctggcctacctgctgcagcagacggatgagtacgtagccaacctc
actgagttggtccgggctcacaagctggtacaggccctcaaagagaagaagaagaagagg
aagaagaagaagctggagaacgctgagggtcagactcctgtactgggacctgatggagaa
cctctagatgagacgtcccagatgagtgacctaccagtgaaggtgatccacgtggacagt
ggtaacatcctgacaggggcggacgctcctaaagctggacagctggacacatggctggag
atgaaccctgggtacgaggtggcccctcgctctgacagtgaagacagtggatcggaagag
gaggaggaggaagaggaggagccccagccagcagtgcctccagtagtggtcctcccaggg
ttagtagggttagaggagaagaagaagaagatcccagacccagacagtgaagaagtatca
gaggtggacgtacgacacatcatagagcatgctaaacaggatgtggatgatgagtataac
agtgcagaggcagcgttcgctcggggactccagtcttactacgctgtggcccatgctgtc
actgagagagtggagaaacagtccactatactcatcaacggacaactgaaacagtaccag
attaaaggtctggagtggctggtgtctctctacaacaacaatctgaatggtatcctggct
gatgagatgggactaggaaagaccatccagaccatcgctctcatcacgtacctgatggag
aacaaacgagtcaacggacctttcctcatcatagtaccgctctcaactctctctaactgg
gtgtatgagtttgacaagtgggctccgtctgtagtgaaagtctcctacaagggttcccct
caggccagaagggccttcatcccccagctacgcagcggcaagttcaacgttctcctcact
acctatgagtacatcatcaaggataaacaggtcctagccaagatccggtggaagtacatg
atcgtggacgagggccaccggatgaagaaccaccactgtaagctgacccaggtcctcaac
acccactacctggcccccaggagagtgctcctaactgggacaccgctccagaacaagctg
cctgagctctgggccctgctcaactttctcctgcccaccatctttaagagctgcagtact
ttcgaacagtggttcaatgcaccgtttgctatgactggagagaaggtggatctaaatgaa
gaggagaccatcctgattatccgtcgcctccacaaggtgctccgccccttcctgttacgc
aggctcaagaaggaagtagaggctcagctcccggaaaaggtggagtatgtaataaagtgt
gatatgtcagcgctccagagggttctatacagacatatgcaggccaagggagtcctactg
acagacggctctgagaaggacaagaaggtgaggaggaacaactcaagcaccaccaaagca
gaggacaggggcatgctgttgaaggcgtttaacgacccggcctcccagtacttcatcttc
ctgctcagtaccagagccggcgggctgggcctcaacctgcagtcagctgacaccgtggtc
atctttgactctgactggaaccctcaccaggaatctttctctgagcatttaggattttcc
ggagggatagtgagtggtcttgacctgtaccgagcctcagggaagtttgaggtgctggac
cgtatcctgcccaagctgagggccaccaaccacaaggtgttgttgttctgtcagatgacc
tcgctcatgaccatcatggaggactacttcgcctaccgcaacttcaagcacctgcgtctg
gacggtacggacctgcaggcccaggaccgtgcgcaccgcatcggccaacagaacgaggtc
cgcgtcctgcgtctctgcaccgtcaactccgtagaggagaagatcctggcggcggccaag
tacaaactcaacgtggaccagaaggtcatccaggccggcatgtttgaccagaagtcatcg
agccacgagcgccgggctttcctgcaggccatcctggagcacgaggaacaggacgaggtc
ggggccccggggggcgtgtggaagtctggggggtcttgggaggaggacgaggtgccagac
gatgagacggtcaaccagatgatcgccaggagcgaggaggagtttgaccacttcatgcgt
atggacctggacaggcggcgtgaggacgctcggaacccccggcgtaagccccgtctgatg
gaggaggacgagctgcccacctggatcgtgaaggatgacgccgaggtggagagactcacc
tgtgaggaagaagaggagaagatgttcgggagggggtcccgccagcgcaaggaggtggac
tacagtgactcactcaccgagaagcagtggctcaaggccattgaggaaggcacgttagag
gagatcgaggaggaggtgcgtcacaagaagaccacccggaagcgaaagcgtgaccgcgat
gacctccctggcccctcctcttcctcctcggggggcaggcggagccgggacaaggacgag
gacgggaagagacagaagaagaggggacgcccccccgcagagaaactctcccccaacccg
ccagctctcaccaagaagatgaagaagatagtggacgctgttattaaatacaaagacagc
agtaatggtcgtcagctgagtgaggtcttcatccagctgccctcgcgcaaagagctgcca
gagtactacgagctcatccgcaagcctgtcgacttcaggaaaatcaaggagaggatccgt
agccacagataccgtagtctaggagacctggagagagatgtgatgctactctttcagaac
gcacagaccttcaacctggagggatcactgatctacgaggactccatcgtgctccagtcg
gtgttcaccagtctgagacagaagatcgagaaggaggaggacagcgagggagaggacagt
gaggaagaggaggaggacctggacgaaggctccgagtcagagtcccgctcagtgaaggtg
aagatccgtctgggacggagagagaagagtagtgaccgggggaagggtaggagacgtatg
ggacgcacccgagccaaacctgtagtcagcgacgacgacactgaagaggagcaggaggag
gaacgctcccccagtggcactgatgaagaatcctaa
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integrated database retrieval system
