Salmo salar (Atlantic salmon): 106564597
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Entry
106564597 CDS
T04363
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sasa02000
]
106564597
03037 Cilium and associated proteins [BR:
sasa03037
]
106564597
Transporters [BR:
sasa02000
]
Other transporters
Pores ion channels [TC:
1
]
106564597
Cilium and associated proteins [BR:
sasa03037
]
Other cilia and associated proteins
Stereociliary proteins
106564597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
106564597
NCBI-ProteinID:
XP_013986219
UniProt:
A0A1S3L6V2
LinkDB
All DBs
Position
ssa12:16364941..16392118
Genome browser
AA seq
1016 aa
AA seq
DB search
MSHYNNTGEYNNPAYHDSDTLEIDRSPSRKSQSHHSNPHGNPYPRDDGAGGQRGRSDLQQ
LPGGVQSSYDDAQERVPWGGWQEGSWRGRDSIPMGLLPPRSESPRWQQHDLNHSGYQIDQ
ATHYDTTPPVRLPSATSGHVSMRFRGSRKMSLFPVGEAALGNLGLSEDDIRNEMENEEQH
LVKELVAMSTRDRIKAIRDLPMSFDDKKHIRGQVLALKSFKKSRHLNCFSDCSTTVSLAF
RRCGANMTLARQTLELWRGTMKEVGGKFGTGVLSYFKFLKWLLMFNIFSFLVNFGFITIP
QLIYHPTPDIPTGVSFKGLEILTGAGYFSHTVMYYGGYSNKTQGTGGWPEYNMQLAYFFT
IAAYMVLCGAALIYSMASSFRKKYVLADSGLGGAWQLLCSWDFSVTNERAVRQRKNNLRI
QLKESLSEKFQVALLPLTERLKHYGVFLGTWLLSTGMALGCGASVYFLCQYDTWRTRQSA
DKASGSLLEEAATLLLPFVVSLINLVVPLFYSLFKKIEHYSNPRMQVYAIIVRNVILKMS
ILGILCYYWMKDVANTFSCWESIVGQALYRLVIVDFLFIMLGSFFGEFLSNVIGTKCIQS
LGVPEFDVARNVLDLIYAQTLAWIGIYFSPLLPVIQIIKFFILFYLKKVSLTQNCQPPRR
AGRAAQMQTIFIAILFFPSFVGALSMVAYTVWTLPPSDNCGPFRGLNTTFSAIQIWMDDL
NGVDGFQWIVWIYQHVIRSEIFYFLVSLIILVFIYIFRQITQGRKLLIILLRQQIVNEGK
DKAFLLEKLQTLQKSKQNKQKKKKQARKRQENESSTGMLQALLARQRLEQEHGDSSSFGV
PMPSGHSVSTTSSALMQAMLARQYAEDQDVASYRGVPFPADPAPASSSALIQAMQARQRA
ESQNEDEFYRAPVQSQNPVNALPSAMIQVMQARQRVESEQEEDEFYRAPVHSEHPVSSTS
SAMMQVMQARLRAEEESEFYRAPASSQHPDVSGTGSALIQAMLARQQVEEEYGDRY
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcactacaacaatactggagaatataacaaccctgcctatcatgacagtgacacc
ctggagatagataggagtccttccaggaaatcccaatcccatcacagtaacccacatggt
aacccctaccccagggatgatggagccggggggcagagaggcaggtctgacctccagcag
ctcccaggaggggtccagtccagctacgacgatgcccaggagagagtaccctggggcggg
tggcaggaggggagctggaggggcagagacagcattcccatgggtctccttcctccccgg
tcggagagcccacgatggcagcagcatgacctcaatcacagcgggtaccagatcgaccag
gcaacgcattatgacacaacgcctcctgtacgacttccatctgcaacttcaggtcatgtt
tcgatgaggttcagggggtcgaggaagatgagtctattccctgtaggagaggctgctctg
ggcaatctgggcctttctgaggacgacatcaggaatgagatggaaaatgaggaacagcac
ttggtcaaagagctggttgccatgtcaacgagggacagaatcaaggccattcgagacctc
cctatgagctttgatgacaagaaacacatcaggggccaagtgttggcattgaaatcattc
aaaaagtcccggcatctgaactgcttttcagactgctcgacgactgtctcactggcgttc
cgtaggtgcggtgctaacatgactttagccaggcagaccctggaactgtggcggggtacc
atgaaggaggtcgggggtaaatttggcacgggggtcctctcctacttcaagttcctaaaa
tggctgctgatgttcaacatcttctccttcctggtcaactttggtttcatcaccatcccc
cagctcatctatcaccccacaccagacatccccactggggtcagcttcaaagggctagag
atactgaccggagcgggttatttcagccacacggtgatgtattatggcggctacagtaat
aaaacacaaggaacagggggctggcctgagtacaacatgcagctggcctacttcttcacc
atagcagcctacatggtgttgtgtggagccgccctcatctacagcatggccagctcgttc
aggaagaagtatgtccttgcagactcaggcttgggtggagcctggcagctcctgtgtagc
tgggacttcagtgtgactaacgagagagccgtacgacagcgcaagaacaatctgcgcatc
caactcaaggagtccttatcagaaaagttccaggtggccctgctacctctgacagagagg
ctgaagcactacggggtcttcctgggtacctggctcctctccacaggcatggccttgggc
tgtggtgccagtgtctacttcctgtgtcaatatgacacatggcggacaaggcagtcagcg
gacaaagcttccggctctctcttggaggaggccgctactctcctcctcccctttgtggtg
tccctgattaatctggtcgtccctctcttctactctctgttcaaaaagatagaacactac
tccaaccctcgcatgcaggtctatgccatcatagtcagaaatgtaattctcaagatgtcc
attctgggtattctctgctactactggatgaaggatgtggccaatacattttcatgctgg
gagtccatcgtaggacaagccttgtacagactggttattgtggacttcctcttcataatg
ttaggatccttctttggagagttcttgagcaatgtcattgggactaagtgcatacagagc
ctgggagttccagagtttgacgttgccaggaatgtccttgacctgatctatgcacagacc
ctggcatggatcggaatctacttctctcccctcctcccagtgatacagataatcaagttc
ttcatcctcttctacctaaagaaggtcagcctgacccagaactgccagccccccaggcga
gccggcagggcggctcagatgcaaaccatcttcatcgctatcctcttcttcccttccttc
gtaggggctctgtccatggtggcctacaccgtgtggactctgcccccctcagacaactgt
gggcccttcaggggcctcaacaccaccttcagtgcaatacagatctggatggatgatctg
aatggggtggatgggtttcagtggattgtctggatctaccagcacgtcatcaggagtgag
atattctacttcctggtctctctcatcatccttgtcttcatttacatcttcaggcagatc
actcagggacgcaagctgcttatcattctactgagacagcagattgttaatgaagggaag
gacaaggcattcttgttggagaagctacagacccttcagaaatccaagcagaacaaacag
aaaaagaaaaaacaggccaggaaaagacaggaaaatgaatcctccactggcatgctccag
gctctgcttgcccgacagcggttggagcaagagcatggtgacagcagctctttcggtgtg
cccatgccttccggccactcagtctccacgacatccagtgctttgatgcaggccatgcta
gccagacaatacgcagaggaccaggatgtagccagttaccgcggtgtgccatttcctgca
gaccccgcacctgcgtcctccagtgcactgatacaggccatgcaagccaggcaaagggcg
gagtcacagaatgaggacgagttttaccgggcgccagttcagtcacagaacccagtaaac
gcattacccagtgcgatgatacaggtgatgcaagccaggcagagggtggagtcagagcag
gaagaggacgagttttaccgggcaccagttcattcagaacacccagtatcatcaacgtcc
agtgcgatgatgcaggtcatgcaggccaggcttagagcagaggaggagagcgagttttac
cgggcgcctgcttcttcacagcacccagatgtgtcaggcaccggtagcgctctgatacag
gccatgctagcccggcaacaggtagaggaggagtacggtgacagatactga
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