Salmo salar (Atlantic salmon): 106564604
Help
Entry
106564604 CDS
T04363
Name
(RefSeq) protein transport protein Sec23A-like
KO
K14006
protein transport protein SEC23
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106564604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106564604
Membrane trafficking [BR:
sasa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
106564604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
APP_E2
Motif
Other DBs
NCBI-GeneID:
106564604
NCBI-ProteinID:
XP_013986224
LinkDB
All DBs
Position
ssa12:16495971..16508029
Genome browser
AA seq
680 aa
AA seq
DB search
MATYQEFIQQNEDRDGVRFSWNLWPSSRLEATRLVVPVSCLFTPLKERPDLPPVQYEPVL
CSRANCKAVLNPLCQVDYRAKIWACNFCFQRNPFPPSYAGISDVNQPAELMPQFSTIEYI
VQRGPSNPLIFLYVVDTCLEEEDLQALKESLQMSLSLLPPNALVGLITFGRMVQVHELSC
EGIAKSYVFRGTKELSSKQIQEMLGLTNPAASGPQGRPVAPQDPAVTCRFLQPVHKVDMN
LTDLLGELQRDPWPVPQGKRPLRSTGIALSIAVGVLEGTFPNTGARVMMFTGGPPTQGPG
MVVGDELKTPIRSWHDITKDNARHLKKATKYYEALANRAAVNGHSIDIYACALDQTGLLE
MKCLSNLTGGHIAMGDSFNTSLFKQTFQRVFSKDYNGEFRMAFGGTLEVKTSRELKVSGA
IGPCVSLNAKGPCISENEVGVGGTTQWKICSLSPSTTLALYFEVVNQHNAPIPQGGRGAV
QFVTQYQHSNTQRRIRVTTVARNWADAQSQIQHIESSFDQEASAVIMARLGVFRAESEEG
PDVLRWLDRQLIRLCQKFGQFNKDDPTSFKLSESLSLYPQFMFHLRRSPFLQVFNNSPDE
CSYYRHHFVQQDLTQSLIMIQPILYSYSFHGPPEPVLLDSGSILPDRILLMDTFFQLVIY
HGEVRGHTGKQWRWWSNASY
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcgacataccaggagtttatccaacagaatgaggatcgggacggcgtgcgttttagc
tggaacctgtggccctcgagcaggctggaagctacccggctggtagtgcctgtctcctgc
ctcttcaccccactcaaggagaggccagacctgccaccggtgcagtacgaaccggtcctc
tgtagcagggccaactgcaaggccgtactaaacccgctatgccaagttgactacagagcc
aaaatatgggcgtgcaacttctgcttccaaagaaacccattccctccatcatacgccggc
atatcggacgtgaaccagccggctgagctcatgccacagttctcaaccattgagtacata
gtgcagcgcggcccctcgaacccgctcatcttcctgtacgtggtggacacgtgtctggag
gaggaggacctgcaggccctgaaggagtccctgcagatgtccctgtccctgctgcccccc
aacgccctggtaggcctcatcaccttcggacgcatggtgcaggtccacgagctgagctgc
gagggcattgcaaagagctacgttttcagaggaaccaaagagctttcctccaagcagatc
caggagatgctaggcctgacaaacccagcggcatctgggcctcagggtcgtcccgtggcc
cctcaggatccagccgtcacctgtaggttcctgcagccggtccataaggtagacatgaac
ctgacagacctgttgggagagctgcagagagatccctggcctgtaccacaggggaagaga
ccactgcggtctactggaatagcactgtccatcgccgtgggcgtgctggagggtacgttt
cccaacacgggggcccgtgtgatgatgttcacgggcggaccccccacccagggccccggt
atggtggtgggagacgaactcaagacccccatccgctcctggcatgacatcaccaaggac
aacgcacggcatctgaagaaagccaccaagtactacgaagccttggcgaaccgtgcggca
gtgaacggccacagtattgacatctacgcttgtgccttggatcagaccggacttctagag
atgaagtgtttatccaacctcactggaggtcacatagcgatgggcgactccttcaacacc
tctctgttcaagcagaccttccagagggtcttcagtaaggactacaacggagagttccgc
atggccttcggaggcacgctggaagtcaagacgtccagggagctgaaggtatcgggggcc
atcgggccctgtgtctccctcaacgctaagggaccgtgtatatcagaaaacgaggtaggt
gttggaggaacaacccagtggaaaatctgcagtctcagtccctccactacgttggccttg
tacttcgaggtcgtcaatcagcacaatgccccaatccctcagggtggtagaggagcggtc
cagtttgtcacccagtaccaacactccaacacccagaggaggatcagggttaccaccgtc
gccaggaattgggccgacgcccagtcccagatccagcacatcgagtcgtccttcgaccag
gaggcgtcggcggtcatcatggccaggctgggcgtgttcagggccgagtcggaagagggg
ccggacgtcctgcgctggctggacagacagctcattcgcctgtgtcagaagttcggtcag
ttcaacaaagatgaccccacctccttcaagctctcggagtccctttcactctacccacag
tttatgttccacctgcgccggtcgccgttcctgcaggtgttcaacaacagcccagatgag
tgttcctactacagacaccactttgtccagcaggacctgacccagtctctcatcatgatc
cagcccatcctgtactcctactctttccacggaccaccagagcctgttctcctggacagt
ggcagtattctcccagaccggatcctcctcatggacaccttcttccagctggtcatctac
catggagaggtgagaggtcacacaggaaaacaatggcgctggtggtctaatgctagttat
tag
DBGET
integrated database retrieval system
