Salmo salar (Atlantic salmon): 106564610
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Entry
106564610 CDS
T04363
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04080
Neuroactive ligand-receptor interaction
sasa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106564610
04082 Neuroactive ligand signaling
106564610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106564610
Ion channels [BR:
sasa04040
]
Ligand-gated channels
GABA-A
106564610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
106564610
NCBI-ProteinID:
XP_013986276
UniProt:
A0A1S3L5M6
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Position
ssa01:11972202..11995809
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AA seq
487 aa
AA seq
DB search
MRTMQVDTVLVLFCVCLMGVSGRSAHQRGDKLETYKQSRSRRETSRMDDGGAHCKTASPI
LKRGPDMTKSPMTKSEQLLRIDDHDFTMRPAFGGPPIPVGVDVQVESLDTISEVDMDFTM
TLYLRHYWKDERLSFTSTNNQSMTFDSRLAKKIWVPDMFFVHSKRSFIHDTTTDNVMLRV
YPDGNVLYSLRVTVTAMCNMDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKKGNESLNTD
ERISLSQFLIQKFHTTTKLAFYSSTGWYNRLYIHFTLRRHVFFFLLQTYFPATLMVMLSW
VSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVI
EYAAVNYLSTVQERKERKLRERLPCTCGIGNPDDAMCDPQITGYTTMDVNSIGNYGTAGN
YGMPENGGRQERMFAQVVLGDPQLTGQVKRPGYVNIWIDTHAIDKYSRMVFPGSYVLFNI
IYWSIYS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccatgcaggtggatactgtgttggtgctgttctgcgtctgcctcatgggggtt
tctgggagatcagctcatcaaagaggtgacaagctggagacctacaaacagagcagatcc
aggagagaaacatcaagaatggatgatggaggagctcactgcaagaccgcaagcccgatc
ctaaaacgaggtccagacatgacaaaatctcccatgacaaaatctgagcagctcttaaga
atagatgaccatgactttaccatgagaccagcatttggaggaccccctattccagttggg
gtagatgttcaggttgaaagtctggacacaatctctgaagtggatatggacttcaccatg
accctgtacctgaggcactactggaaggacgagcgcctgtccttcaccagtaccaataac
cagagcatgacctttgacagcaggctggccaagaagatctgggttcctgacatgttcttc
gtccactccaagaggtccttcatccatgacacaaccacggacaacgtcatgctgagggtg
taccctgacggcaacgtgctttacagtctgagagtcacagtcacggccatgtgcaatatg
gacctgagtcgcttccctctagacacacagacctgctcgctggaaatagagagctatgca
tacacggacgatgatctcatgctgtactggaagaaaggcaatgagtcactgaacacggac
gagaggatatctttatcccagttcctcatccagaagtttcacaccactacaaagctggcc
ttctatagcagtacaggctggtacaaccgtctgtacatccacttcaccctgcgacgtcac
gtcttcttcttcctgctccagacatacttcccagccaccctcatggtcatgctgtcctgg
gtctccttctggattgaccgccgggccgtccccgctagggtccctttgggtatcaccaca
gtgctcaccatgtctaccatcatcactggagtcaacgcctccatgcccagagtgtcctac
atcaaagcggtggacatctacctgtgggtcagtttcgtgtttgtcttcctctcggtcata
gagtatgccgcggtcaactacctctctaccgtgcaggaaaggaaagagaggaaactaaga
gagaggttgccgtgtacctgtggcatcggaaaccctgacgacgccatgtgcgacccccag
atcactggctacaccaccatggacgtcaacagtatagggaactatggcaccgcagggaac
tatgggatgccggaaaacggtggcaggcaggagagaatgtttgcccaggtggttctgggg
gatccccaactcacgggccaggtaaaaaggccaggctatgtgaacatttggatagacacc
cacgccatagacaagtactcacggatggtcttccctggttcctacgtcctgttcaacatc
atctactggtccatctactcctaa
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