Salmo salar (Atlantic salmon): 106564627
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Entry
106564627 CDS
T04363
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sasa03009
]
106564627
Ribosome biogenesis [BR:
sasa03009
]
Eukaryotic type
90S particles
Other 90S particles
106564627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Suf
TPR_19
ARM_TT21
ARM_TT21_5th
TPR_15
TPR_CcmH_CycH
TPR_16
ARM_TT21_N
NRDE-2
HAT_Syf1_M
TPR_7
PPR
TPR_12
ANAPC3
DUF7017
Wzy_C_2
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
106564627
NCBI-ProteinID:
XP_013986269
UniProt:
A0A1S3L702
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All DBs
Position
ssa12:complement(17236295..17243053)
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AA seq
499 aa
AA seq
DB search
MLPFIVFDSLSRSINGRAQFQKATKYFVASHQDYAKKVPQSTLLTTKILSIDKEKGLVDL
SLLQEDTGKPDVLPESLGLHLRLTGDAKEKRDTTKKRKRTESESKQETAEKVSKKKKGKG
EDSDSGVEVYFREEEVEEEKKLEPAEVEKPVPVQPARLQVTGGFSWDAALSALKPASAAL
GGEDSSDGEDDEVNTKPQKKSRHKQEVEKREAEKALTKLETELMDPGLRPQTAASFERLL
LSSPDSSLLWLQFMAFHLQATQIEQARAVAERALKTISFREEQEKLNVWVALLNLENLYG
TEESLQKVFERAVQYCEPMPVYQQLADIYAKCQKTKEAEGLYKTMVKRFRQEKAVWLSYG
TFLLQQGQSDAASALLQRAIKSLPNKDNVDLIAKFAQLEFRYGDVERGKTMLDKILTSYP
KRTDLWSVFIDLMVKHGSQKEVRAVFDRVIHLSVAVKRIKFFFKRYLEYEKKNGTPESIQ
AVKEKALEYVESKGTEAAR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgttgccttttattgtttttgacagtttgtctaggtccataaatggcagagcccagttc
cagaaggccactaagtactttgtggctagccaccaagactatgccaagaaagtaccacag
tccacactgctcaccaccaagatcctcagcatcgacaaagaaaaagggctggtggatctg
tctctgctccaagaggacactgggaaaccagacgtgctcccagaatccctggggctgcac
ctgcgcctgacaggagacgccaaggagaagcgtgacaccaccaagaagaggaaacgcaca
gagtcggagagcaagcaggaaacagcggagaaagtttcaaagaagaagaaggggaaaggg
gaggacagcgacagcggagtggaggtctacttcagagaagaagaggtagaggaggaaaag
aagttggaacctgcggaggtggagaagcccgtcccagtgcagccggccagactacaggtg
accggagggttctcctgggatgcagcgctgagcgccctgaagccagcatccgctgccctg
gggggagaggactccagcgacggggaggatgacgaggtgaacactaagccccagaagaag
tctcgccataagcaggaggtggagaagcgggaggctgagaaggccctgaccaagctggag
acagagctgatggacccaggcctgcgaccccagacggcggctagctttgagcgcctgcta
ctcagctcccctgacagctctctgctctggctgcagttcatggccttccacctgcaggcc
acacagatagaacaggctagagcggtggccgagagggctctgaagactatctccttcaga
gaagagcaggagaagctgaatgtgtgggtggctctgttgaaccttgagaacctgtatggg
acagaggagagtcttcagaaggtgtttgagcgagccgtgcagtattgtgaacccatgccc
gtctaccagcagctggctgacatctacgccaagtgtcagaagactaaggaggcggaaggt
ctgtacaagaccatggtgaagaggttccgtcaggagaaggctgtgtggctgagctacggg
accttcctgcttcagcagggtcagagtgacgcggccagcgccctgctacagagagccatc
aagagcctgcctaacaaagacaatgtggatctgatagcgaagtttgcccagctggagttc
cgctacggagacgtagagcgaggaaagaccatgttggacaagatcctgaccagctacccc
aaacgcaccgacctgtggtccgtcttcatagacctcatggtcaaacacggctcccagaag
gaagtgcgggctgtgtttgaccgtgtgatccacctgagtgtggcggtgaagaggatcaag
ttcttcttcaagcgttacctggagtatgagaagaagaacggcacgccagagagcatccag
gctgtcaaggagaaggctctggagtacgtggagtctaaagggaccgaggccgccagatag
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