KEGG   Salmo salar (Atlantic salmon): 106564627
Entry
106564627         CDS       T04363                                 
Name
(RefSeq) protein RRP5 homolog
  KO
K14792  rRNA biogenesis protein RRP5
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sasa03009]
    106564627
Ribosome biogenesis [BR:sasa03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    106564627
SSDB
Motif
Pfam: HAT_PRP39_C HAT_PRP39_N TPR_14 HAT_Syf1_CNRKL1_N HAT_Syf1_CNRKL1_C Suf TPR_19 ARM_TT21 ARM_TT21_5th TPR_15 TPR_CcmH_CycH TPR_16 ARM_TT21_N NRDE-2 HAT_Syf1_M TPR_7 PPR TPR_12 ANAPC3 DUF7017 Wzy_C_2 Mad3_BUB1_I
Other DBs
NCBI-GeneID: 106564627
NCBI-ProteinID: XP_013986269
UniProt: A0A1S3L702
LinkDB
Position
ssa12:complement(17236295..17243053)
AA seq 499 aa
MLPFIVFDSLSRSINGRAQFQKATKYFVASHQDYAKKVPQSTLLTTKILSIDKEKGLVDL
SLLQEDTGKPDVLPESLGLHLRLTGDAKEKRDTTKKRKRTESESKQETAEKVSKKKKGKG
EDSDSGVEVYFREEEVEEEKKLEPAEVEKPVPVQPARLQVTGGFSWDAALSALKPASAAL
GGEDSSDGEDDEVNTKPQKKSRHKQEVEKREAEKALTKLETELMDPGLRPQTAASFERLL
LSSPDSSLLWLQFMAFHLQATQIEQARAVAERALKTISFREEQEKLNVWVALLNLENLYG
TEESLQKVFERAVQYCEPMPVYQQLADIYAKCQKTKEAEGLYKTMVKRFRQEKAVWLSYG
TFLLQQGQSDAASALLQRAIKSLPNKDNVDLIAKFAQLEFRYGDVERGKTMLDKILTSYP
KRTDLWSVFIDLMVKHGSQKEVRAVFDRVIHLSVAVKRIKFFFKRYLEYEKKNGTPESIQ
AVKEKALEYVESKGTEAAR
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgttgccttttattgtttttgacagtttgtctaggtccataaatggcagagcccagttc
cagaaggccactaagtactttgtggctagccaccaagactatgccaagaaagtaccacag
tccacactgctcaccaccaagatcctcagcatcgacaaagaaaaagggctggtggatctg
tctctgctccaagaggacactgggaaaccagacgtgctcccagaatccctggggctgcac
ctgcgcctgacaggagacgccaaggagaagcgtgacaccaccaagaagaggaaacgcaca
gagtcggagagcaagcaggaaacagcggagaaagtttcaaagaagaagaaggggaaaggg
gaggacagcgacagcggagtggaggtctacttcagagaagaagaggtagaggaggaaaag
aagttggaacctgcggaggtggagaagcccgtcccagtgcagccggccagactacaggtg
accggagggttctcctgggatgcagcgctgagcgccctgaagccagcatccgctgccctg
gggggagaggactccagcgacggggaggatgacgaggtgaacactaagccccagaagaag
tctcgccataagcaggaggtggagaagcgggaggctgagaaggccctgaccaagctggag
acagagctgatggacccaggcctgcgaccccagacggcggctagctttgagcgcctgcta
ctcagctcccctgacagctctctgctctggctgcagttcatggccttccacctgcaggcc
acacagatagaacaggctagagcggtggccgagagggctctgaagactatctccttcaga
gaagagcaggagaagctgaatgtgtgggtggctctgttgaaccttgagaacctgtatggg
acagaggagagtcttcagaaggtgtttgagcgagccgtgcagtattgtgaacccatgccc
gtctaccagcagctggctgacatctacgccaagtgtcagaagactaaggaggcggaaggt
ctgtacaagaccatggtgaagaggttccgtcaggagaaggctgtgtggctgagctacggg
accttcctgcttcagcagggtcagagtgacgcggccagcgccctgctacagagagccatc
aagagcctgcctaacaaagacaatgtggatctgatagcgaagtttgcccagctggagttc
cgctacggagacgtagagcgaggaaagaccatgttggacaagatcctgaccagctacccc
aaacgcaccgacctgtggtccgtcttcatagacctcatggtcaaacacggctcccagaag
gaagtgcgggctgtgtttgaccgtgtgatccacctgagtgtggcggtgaagaggatcaag
ttcttcttcaagcgttacctggagtatgagaagaagaacggcacgccagagagcatccag
gctgtcaaggagaaggctctggagtacgtggagtctaaagggaccgaggccgccagatag

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