Salmo salar (Atlantic salmon): 106564691
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Entry
106564691 CDS
T04363
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106564691
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Others
Others
106564691
Endosome - Lysosome transport
106564691
Endosome - Golgi transport
106564691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
DUF7828
Motif
Other DBs
NCBI-GeneID:
106564691
NCBI-ProteinID:
XP_013986416
LinkDB
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Position
ssa12:18115715..18371137
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AA seq
1263 aa
AA seq
DB search
MDTWLGFCPGLHLTLCTWLLISAHTQLNAKAEITCASCQSPVQLHLKELQLDTGTHAADG
TRQAAKALEQVRLEYQLLGVTDQNTGVPSDTQQAGVLVDEPRFTDDGVTPKVALEDLTGS
SENEERYRGEYNIGVDDLGNVKDGAEDVALRRAKRSGPEHPEFRESLKTGGPGLKGETSD
ERRSPGPLLDGHRLGRSEFKWNRDEGRGNSRGDDPKLSSTTFALTGDSAHNHAVVYWSGQ
NSSVILILTKLYDFHLGSVTESTLWRSTDYGSTYERMNDKVGSKTVLSYLYVCPSNKKKI
MVLTDPEFESSVLISSDEGASYQKYRLSFYILSLLFHPTQEDWALAYSHDQKLYASLDFG
RKWQLVHEHVNRFYWSVTGLDKESDLVHMEAHTPNGRIQYVTCQALICSEPNRNYPFPGY
IDISSLVVQDDYMFIQVTRAGQASYYVSYQRDPFLKIKLPKYSLPKDLHIVSTDEHQVFA
AVQEWNQNDTYNLYLSDTRGILFTLAMENVKTTRGLGGNQMLDLYEVAGIKGMLIANRRL
DNQVKTYITYNKGRDWRLLQAPATDLAGNDIHCILPFCSLNLQLQTSENPYLSGSISTKA
SAPGIIVATGNIGSELSYNNVGMFISSDAGNNWRQIFEEEHNVWFLDKGGALVAVKQPTV
PTRHLQISFDEGRQWTRHSFSLVPLFVDGMLVEAGTENQIMTFFGHFSHRSEWQLIKIDY
KSIFNRKCTEGDYQTWHLHNKARPLKQEGEPCVMGQKQIYMKRRPGNYCMLGKDYAKVLS
AESCICRAHDFECDYGYERRREGNCLPAFWFNPAVVSRSCSQGQNYLNSTGYRKVVSNNC
IKGVKDMYTPRKQMCPNRAPKGLSLSTREGKLTADLHTNVTFLVHLDEGDSMRTNIQLDF
GDGTAVSYSNLSWIEEGIRHVYKTAGIFRVSALAENTLGFDTTTLYLHVTCPVEHVQLLA
PFVAIKNKEVNLTAVVWPIHSRTLNYFWWLGNSTEPVISLDGSISYTFTSEGMNTVTVQV
SSANAILQDTKTIAVQEFFKSLLLSFSPNLDEYNPDVPEWRQDVGRVIKKALLQVSDFQE
DQLLVAVFPGVPTAAELFLLPHKNQSEGRKKCEEELEQISEILASALNQNLVEFELKPGA
RVIVYITQLTLGKERTPLVDSIPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWMNIYA
EVNQEKEQEMIGSVSQSDSTPKTTFSEFSTPKEVKEKEMDARVKRRIGNACESTREIPNC
TSV
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggatacttggcttggcttctgcccaggcttgcacttaactctgtgtacctggcttctg
atctccgctcatacccagctaaatgccaaggcggagataacttgcgcatcgtgccagtcg
ccggtccagctacacctgaaggaattacagctggataccggtacgcacgcggctgatggt
acgaggcaggcggccaaagctctggaacaggtccggctggagtaccagctactcggagtt
actgaccaaaatactggagtaccaagcgacacccaacaggcaggtgttctcgtggatgag
ccgagattcactgacgatggagttaccccaaaagtcgctctggaagatttaaccgggtct
agtgaaaacgaagaaaggtaccgtggtgaatataatattggggtggatgatttgggtaat
gtcaaggatggtgctgaggatgttgcgttacggagagcgaagcgaagcggtcccgaacac
cccgagtttagggagagccttaagaccggtggccccggtttaaaaggagagacatcggat
gagagaaggagtcctggtccgttattggacggacacagactgggccgatccgaatttaag
tggaacagggacgagggtcgagggaattccagaggagatgatcccaaactaagcagcact
actttcgctttgaccggggactcagcgcataaccatgcagtggtttactggtcggggcaa
aacagcagcgtgatcctgattctgaccaaactttatgattttcacctggggagtgttaca
gagagcaccttgtggagatcaacagactatggctccacctatgagaggatgaatgacaaa
gtgggatctaagactgtcctcagttacctgtatgtctgtccatccaacaagaaaaagata
atggtgctgacagatcctgagtttgagagcagtgtgctcatcagctcggatgaaggagcg
agctatcagaaataccgcctcagtttctacattctaagccttctgttccatccaacacag
gaggattgggccctagcctacagccacgaccagaagttgtacgcctccctggacttcggg
agaaaatggcagctggttcatgagcatgtgaacaggttctactggtctgtaacgggtcta
gacaaggagtcagatctggttcacatggaggcacacacccccaatggacgtatacagtat
gtaacatgccaggctctaatatgctcagagcccaacagaaactaccccttccctggatac
atcgacatcagctcactggtggttcaagatgactatatgtttattcaggttactagagca
ggacaggccagctactatgtgtcctaccagagggatccattcctcaaaatcaaactgcca
aaatattctctgcctaaggacctccacattgtcagcacagacgagcaccaggtgttcgcg
gcagtacaggagtggaaccaaaacgacacatacaacctgtacctctctgacacccggggc
atcctcttcaccctggccatggagaacgtcaagaccacccgcggcctggggggcaaccag
atgctggacctgtatgaggtagcaggtatcaaaggcatgctgatcgcaaacaggaggcta
gacaaccaggtgaagacctacatcacctacaacaagggccgtgattggaggttgctgcag
gccccggcaacagacctggctggcaacgacatccactgtatactgcccttctgttcgctc
aacctccaactgcagacgtctgaaaacccctacctgtcaggcagcatatcaaccaaggcc
tcagcaccgggaatcattgtggccacagggaatattgggtctgagctgtcgtacaataac
gttggaatgttcatctcatctgatgctggtaacaactggcgacagatattcgaggaggaa
cacaacgtctggtttctggataaaggaggggcccttgtcgctgtgaaacaaccaacggtc
cccaccagacatttacaaatcagttttgatgaggggcgtcagtggaccagacacagcttc
tccttggtgcctctgttcgtggacgggatgctggtggaggccgggacagagaaccagatc
atgacgttttttggacatttcagccataggtcagagtggcagcttatcaagatagactac
aagtccatcttcaacaggaaatgtacagaaggagactatcagacgtggcaccttcacaac
aaggcaagacctcttaaacaggaaggcgagccatgtgtgatgggccagaaacagatctat
atgaaacgcagaccaggaaactattgcatgctgggaaaagactatgccaaagtcctctct
gctgagtcgtgtatctgtcgggcccacgactttgaatgtgattatggctatgaacggcgt
agagaagggaactgtctaccagcattctggttcaacccagctgttgtatcaaggagctgc
agccaaggacagaactacctcaacagcacagggtaccgaaaagtggtgtccaacaactgc
atcaaaggagttaaggacatgtacacacccaggaagcagatgtgtcccaacagggctcca
aaaggcctttctctctccaccagagagggcaagcttactgccgacctgcacaccaacgtc
accttcctggtgcatctggatgagggtgactcaatgagaaccaacatccaactggatttc
ggagatggcacggcagtctcctactccaacctgagctggatcgaagagggtatcagacat
gtttacaagacggctgggatattccgtgtctcggccttggcggaaaacaccctgggattt
gatactaccacgttgtacctccatgttacgtgtcctgtggaacatgtccagttgctggct
ccatttgtggctatcaagaacaaagaagtaaacctaacagcagtggtgtggcccatccac
tccaggaccctcaactacttctggtggctggggaacagcactgagccggtgatcagctta
gatgggagcatctcgtacaccttcactagcgagggaatgaacactgttacggtccaagtg
tcttcagccaatgccatactacaagacaccaagacgatagcagtccaagagttcttcaaa
tctctgcttttatctttctcccctaatctggacgagtacaaccctgatgtccccgagtgg
agacaggatgtggggagagtcattaagaaggctctgctccaagtgtcagactttcaagag
gatcagctattggttgcagtgtttccaggtgtgccaacggccgctgagctcttcctgtta
ccacacaagaaccaatcagagggcaggaaaaagtgcgaggaggagctagagcagatctct
gagatacttgccagcgctctgaaccagaatctggtggagtttgagctaaagccaggagca
agagtaattgtttacatcacacagctaactttgggtaaggaaagaacacccttggtggat
tccatcccgagacacagcagttcagccatgctgatgctcctatcagtagtattcctgggt
ttagcagtgtttctcatctacaaattcaagagaaaaattccctggatgaacatatacgcg
gaggtgaaccaggagaaagagcaggagatgattggttcggttagccagagtgacagcacg
cctaagaccaccttcagtgagttctctacgcccaaagaagtcaaggagaaggagatggac
gccagagttaaacgtcgaattggaaatgcctgtgagagcacaagggagattcctaactgt
actagcgtgtaa
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integrated database retrieval system
