Salmo salar (Atlantic salmon): 106564821
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Entry
106564821 CDS
T04363
Name
(RefSeq) spastin-like
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106564821
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106564821
Enzymes [BR:
sasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
106564821
Membrane trafficking [BR:
sasa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
106564821
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
106564821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
TIP49
AAA_5
AAA_22
Vps4_C
Mg_chelatase
AAA_14
AAA_16
DUF815
IstB_IS21
nSTAND3
AAA_24
RNA_helicase
NPHP3_N
MIT
AAA_2
Motif
Other DBs
NCBI-GeneID:
106564821
NCBI-ProteinID:
XP_013986725
UniProt:
A0A1S3L7D7
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Position
ssa12:complement(27574750..27637589)
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AA seq
596 aa
AA seq
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MSSPGGRGSRKKRGPAGSPPDGGATCDQVSLHKRNLYYFSYPLLALFAVLRVLVLHFGEL
FAWLYERMSRAMAARPKQRAADEHANKVCEQDIGEQIRNHHKQAFEYISVALRIDEDDKV
HKEQAVQWYKRGIAELERGIAIEVAENGEKCERDKRLQAKMITNLIMAKDRLELLEKLRS
GPAQRDIYAESSNQSYHNGYLRSVSGAVPKKRDSLTTHSSHSLPRPKHTPKKTLAAGHGG
LQRSPSFIGPSSSHTQHRLAPQSNRNKSKAGNRQNCKPTTTPTSMSPLKKRDMKNLKNVD
SKLANLILSEIIDSGSSVRFEDVAGQELAKQALQEIVILPALRPELFTGLRAPARGLLLF
GPPGNGKTMLAKAVAMESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFID
EIDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDERVLVMGATNRPQELDEAVLRRFA
KRVYVALPTEETRLKLVKNLLGKHGNPLTQKELSQLARLTEGYSGSDLTSLAKDASLGPI
RELHPEQVRNMAANEVRNIRFSDFVESLKKIKKSVGPQTLDLYVRWNKDYGDTTGA
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccgggaggaagaggcagcagaaagaagcgaggccctgcagggtccccgccc
gacggaggggccacctgcgaccaggtgtcactacataaacgaaatttgtactacttctca
tacccactgctggcgttgtttgcagtgctccgtgtcctcgtcttgcattttggcgaactc
ttcgcctggctgtacgagcggatgtctcgtgctatggctgcgagacccaaacaacgggca
gcagacgagcatgcgaacaaggtatgcgagcaggacatcggcgagcagatccgaaaccac
cacaaacaagcattcgagtacatctcagtggctctgagaattgacgaggatgacaaagtg
cacaaggaacaggcagtccagtggtacaaacgcggaatcgcagagctcgagaggggcatt
gcgatcgaggtagctgaaaatggcgagaaatgtgaacgtgataaacgtctacaggccaag
atgatcaccaatctgatcatggcaaaggatcgcctggagcttttagaaaagctgcgttca
gggccagctcagagagacatctatgcagagagctcaaaccagtcataccataacggttat
ctacgctcagtaagtggagccgtacccaaaaagagggactccctgactactcactccagt
cactccctcccacgaccaaagcatacgccaaaaaaaaccttggcggcaggccacgggggc
ctccagcgctccccgagcttcattgggccctccagcagtcacacacagcacagactggcc
cctcagtccaacagaaacaagagtaaagcgggcaaccggcaaaactgtaaacccaccacc
actcccacatccatgtccccactgaagaagagggacatgaagaacttgaagaatgtggac
agcaagcttgccaacctcatcctcagcgagatcatagacagtggctcatctgtgaggttt
gaggacgttgctggccaggagctggctaagcaggccctacaggaaatagtcatccttcct
gcactgaggccagagttgtttacaggtttgagggctccagcacgaggccttctgctcttc
ggtcctcctggcaacggaaagacgatgctggctaaagcagtggccatggagtccaacgcc
acattcttcaacataagtgcagccagcttgacctcgaaatatgtgggggagggagagaag
ctggtgcgagctctgtttgccgtcgccagagaactgcaaccctcgatcatcttcatagat
gagatcgacagtctactctgtgaaaggagagagggagagcatgatgccagcagacgactg
aagaccgagttcttgattgaatttgatggggtgcaatctggtggggatgaacgggtgttg
gtgatgggagccaccaacaggcctcaggagctggacgaggctgttcttaggcgatttgca
aaacgggtgtacgtggctttaccaacagaagagacacggctaaaactggtcaagaacctt
ttagggaagcacgggaatcctctcacacagaaagaactgtcccagcttgccagattgaca
gaaggctactctggcagtgacctgacctcgctggccaaagatgcgtccctcggtcccatc
agagagttgcatccagaacaagtcaggaacatggccgcaaacgaggtgaggaatatcagg
ttttctgatttcgtggagtcactgaagaagatcaagaagagtgtcggaccacagacgctg
gacctgtatgtgcgctggaacaaggactatggggacacaacaggtgcatga
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