Salmo salar (Atlantic salmon): 106564850
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Entry
106564850 CDS
T04363
Symbol
RAB1A
Name
(RefSeq) ras-related protein ORAB-1
KO
K07874
Ras-related protein Rab-1A
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106564850 (RAB1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106564850 (RAB1A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106564850 (RAB1A)
04031 GTP-binding proteins [BR:
sasa04031
]
106564850 (RAB1A)
Membrane trafficking [BR:
sasa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
106564850 (RAB1A)
Autophagy
Other autophagy associated proteins
106564850 (RAB1A)
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106564850 (RAB1A)
Exosomal proteins of other body fluids (saliva and urine)
106564850 (RAB1A)
Exosomal proteins of colorectal cancer cells
106564850 (RAB1A)
GTP-binding proteins [BR:
sasa04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
106564850 (RAB1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
Gtr1_RagA
SRPRB
AAA
FeoB_N
AAA_7
ABC_tran
PduV-EutP
AAA_16
LANC_like
AAA_29
Septin
AAA_22
AAA_5
CRAL_TRIO_2
TniB
Motif
Other DBs
NCBI-GeneID:
106564850
NCBI-ProteinID:
XP_013986786
UniProt:
B9EN43
LinkDB
All DBs
Position
ssa12:complement(26554212..26557458)
Genome browser
AA seq
202 aa
AA seq
DB search
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADNLGIPFLEASAKSATNVEQAFMTMAAEIKKRMGPGATAG
GSEKSNVKIQSTPVKTSSGGCC
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgaatatgattatttattcaagctgcttctgattggcgactctggcgttgga
aagtcttgcctcctcctccgatttgcagacgacacatacacagagagctatattagcact
attggagtggacttcaaaattaggaccatagagttagatgggaagaccatcaaacttcag
atttgggacacagctggacaggagcggttccggacaattacatccagttactacagagga
gcgcatggcattatagtagtgtacgatgtcacagaccaggaatcgttcaataacgtgaaa
caatggctacaggagattgaccgttacgccagtgaaaacgtgaacaagctgttagtaggc
aacaaatgtgacttgacgacaaagaaagtggtggactacactacggccaaggaatttgct
gacaatttagggatccccttcttggaagctagcgccaagagcgccaccaacgtggagcag
gccttcatgaccatggcagctgagatcaagaagagaatgggcccaggggccacagccgga
ggctcggagaagtccaacgtcaagatccagagcacgccagtcaagacctcctctggaggc
tgctgctga
DBGET
integrated database retrieval system
