Salmo salar (Atlantic salmon): 106564856
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Entry
106564856 CDS
T04363
Name
(RefSeq) vacuolar protein sorting-associated protein 54-like
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106564856
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106564856
Protein phosphatases and associated proteins [BR:
sasa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106564856
Membrane trafficking [BR:
sasa04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
106564856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
SU10_portal
SBP_bac_6
Motif
Other DBs
NCBI-GeneID:
106564856
NCBI-ProteinID:
XP_013986795
UniProt:
A0A1S3L7K6
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All DBs
Position
ssa12:complement(26416446..26443384)
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AA seq
988 aa
AA seq
DB search
MASSHSSSPVPHPSSGGSEGLFQKDRDPSSRHYRPIHSLPDVCPKEPTGEAARGLCEGPS
VVADQHRWTVYNSKVNLPAALNDPRLAKRESDFFTKTWGLDFAETEVTPSFYLPNITKEH
FGPYLQETAQREKIHERCKNICSNKDELDAVSSITNNHDKSRTELEQVPKIFMKPDFALD
DPTTFNAVLPWSHFNSAGGKSSRDMASSRLLQEKLSHYLDVVEVSIARQISLRSEAFFHA
MSSQHELQDRLTETARAVAVLRGRTAAIERIMCEGPLQALRQALTRSNCARLHNKLKLMA
AVHQSQPTVQLLLSTSEFVGALELIATTKEVLQLELQGIHSFRHLGSQLCEMEKLIDKMM
VEDFSMYSRSDLSRSLEDDGQVMEKDRLESLVFGLLRQRKLDFLDIYSDEMILAAKSIIT
QSVFDSVSQIEEIDTDIVTKLADQMRLMTFPQWFELLKSVFENFILFLKRIKATLSVVRN
VVLEALDSNQKSRLLERAAAVGLTEAPGTPLNQEEAELAYLTHEGLFISDALNDAQLHLG
ASTGHEQSSTVGPRQALSRMDGCGSDSASGTTESSSSREHAFQPGGAAVSSSEDMMPSDL
ELGRVANNIQELLYTASDVSHDRCVKVLMARAKDGSLERLSSAEFVFLSQAVEGFVRDTE
KLCCRRSVSLRGALQSQANRFVHRFHEERKTKLSLLLDNERWKQAEVPAEFQDLVNSIAD
GRITLPERKSQGTEERKPSDYLHIDGQKYAVVGTVLLLIRIFLEYCQCVNDIPSISTDML
TRLSDLLKHFNSRSCQLVLGAGALQVVGLKTITTKNLALASRCLQLVVHYIPVIRAHFET
KLTPKQYSVLRHFDHITKDYNDHITEISTKLMAIMDSLFEKVLSKYEVKAPMPSACFRNV
CKQMAKMHEALYELLPEEQTQMLFLRINASFKMHLKKQLARLGVHHDGGPQHGLVTVDVA
FYTENVQSLRALEKLDLNMAEIWEQKRP
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagccacagctcctccccagtgcctcatcccagcagtggtggcagcgagggt
ctcttccagaaggacagggacccttcctcacgacactacaggcccatccactccctgccc
gacgtctgccccaaggagcccacgggcgaggcagcccgggggctgtgcgagggcccgtcg
gtggtggccgaccagcacaggtggacggtgtacaactccaaggtgaacctcccagccgcg
ctgaacgacccacggctggccaagagggagtctgacttcttcaccaaaacctggggcctg
gactttgccgagacagaagtcacgccctccttctacctccccaacatcacaaaggaacac
tttggcccctacctgcaggaaacagctcagagggagaaaatccatgagcgatgcaagaat
atctgttccaacaaggatgagctggatgctgtctccagcatcacaaacaaccacgacaaa
tcaagaacagagttggagcaggtgcccaagatcttcatgaagcctgattttgcgctagac
gacccaacgacctttaacgcggtcctaccatggtcccacttcaacagcgctggcgggaag
agcagtagggacatggcatcgtcacggttactacaggaaaagctgagccactacctcgac
gtggtggaggtgagcatcgcgcgccagatctccctgcgctccgaggccttcttccacgcc
atgtcctcccagcacgagctccaggaccgactcaccgaaaccgcccgcgccgtggcagtc
ctccggggccgcacggccgccatcgaacgcatcatgtgcgaaggcccactgcaggcactg
cggcaggcgctgacgcgctccaactgcgcgcggctgcacaacaagctgaagctgatggcg
gcggtgcatcagagccagcccactgtgcagctgctgctctccacctcggagttcgttggg
gccctggagctcatcgccaccaccaaggaggtgctgcagctagagctgcaggggatacac
agcttcagacacctgggctcgcagctgtgtgagatggagaagctgatagacaagatgatg
gtggaggacttcagcatgtactccaggagtgacctcagcaggagtctggaggacgacgga
caggtcatggagaaggacaggctggagtctctggtgtttggcttgctgaggcagcggaag
ctggattttctggacatctacagcgacgagatgatcctagcagccaaaagcatcatcaca
cagtctgttttcgactcggtgtcgcagatcgaagaaattgacactgacatcgtcacgaag
ctggcagaccagatgcgtctgatgaccttcccccagtggtttgagctgctgaagtccgtc
tttgagaacttcattctcttcctgaagaggatcaaggcgacgctgagtgtggtgaggaat
gtcgtgctggaggcgctggatagcaaccagaagagccgtctgctggagcgggctgcagcg
gtgggcctgactgaggccccaggaacccctctcaaccaggaggaagcagaactggcctac
ctcacccacgagggcctgttcatcagcgacgctctcaatgatgcccagctgcacctgggg
gcaagcacaggccacgagcagagctccaccgtggggcccaggcaggccctgtcacgtatg
gatggttgtggtagtgactctgcctcagggaccaccgagtcgtcctccagcagggaacat
gctttccagccaggaggggccgccgtctcgtccagtgaggacatgatgcccagtgacctg
gagctgggccgcgtggccaataacatccaggagctgctctacaccgcctcagacgtcagc
cacgaccgctgtgtcaaagtcctcatggccagagccaaggatggctccctggagcgtctg
agctcggcagagtttgtgtttctgtcccaggcggtggaaggctttgtgagggacacagag
aagctgtgctgcaggcgcagtgtgtcccttaggggggcgctacagagccaggccaaccgc
tttgtccaccgcttccacgaggagcgtaagaccaagctcagtctgctgctggacaatgag
cggtggaagcaggcagaggttcctgcagaattccaggacctggttaactccatagcagat
ggcaggatcacactacccgaacgcaaatcccaaggcacagaagaaaggaaaccaagtgat
tatttgcacattgatggccagaaatatgctgttgttggcacggtgttactactgatacgg
atcttcctggagtactgtcagtgtgtcaacgacatcccttccatctccacggacatgctc
acccgcctctcagacctactcaagcacttcaactcgcggagctgccagctggtcctgggg
gcaggagcactacaagtggtgggactcaagaccatcaccactaaaaacctggccctggcc
tctcgctgtcttcagctggtggttcactacattcccgtcatcagggcccactttgagacc
aagctgacgcccaagcagtacagcgtcctcaggcactttgaccacatcactaaggactac
aacgatcacataacggagatctccactaaactgatggcgatcatggacagcttgtttgag
aaggtgctgtctaagtatgaagtcaaggcccccatgccctcggcctgctttcgcaacgtg
tgtaaacaaatggctaaaatgcacgaagccctttacgagctgctacctgaggaacagaca
cagatgttgttcctgaggatcaatgcaagctttaaaatgcaccttaaaaagcagctggcc
cgtctcggggtgcaccacgacggtggacctcaacatgggctggtgacggtggatgtggca
ttttacactgagaacgttcaatcactgagggcacttgaaaagctggacttgaacatggct
gagatctgggagcagaagaggccctaa
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