Salmo salar (Atlantic salmon): 106564858
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Entry
106564858 CDS
T04363
Name
(RefSeq) homeobox protein OTX1 B-like
KO
K09326
homeobox protein OTX1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106564858
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
106564858
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
CPSF73-100_C
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
106564858
NCBI-ProteinID:
XP_013986799
UniProt:
A0A1S3L8J9
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All DBs
Position
ssa12:26362443..26368237
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AA seq
363 aa
AA seq
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MMSYLKQAPYGMNGMGLSGTAMDLLHPSVGYPDRNGFEEFPLTGFYSISAHPRKQRRERT
TFTRTQLDILESLFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQAQSGNNA
KVRPAKKKSSPTRESTGSESSGQFTPPAVSSTGSSSSSSASSGGSHPSGHGGQGLSSTST
SVTAPVSSIWSPAPISPAPAPPSVPDPAPPTSASCMQRSVSGTGGTSSYPVSYSQTAASY
GQGYPAPASTGSYFGGVECSSYLAPMHSHHHPHHPHQLSPMTGSSMSGHPHHHIGQTSGH
HHHHHPHHHQAYSGAGLAFNSSDCLDYKEQTAAAAASSWKLNFNTTDCLDYKDQASSWRF
QVL
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaaacaggccccgtacggcatgaacggaatggggctcagcggtacg
gccatggacctactgcacccatcagtggggtatccagatcgaaatggcttcgaagagttt
cctttgacaggtttctattccatttcagcgcatccgaggaaacagcggagagagaggaca
acttttactcgcactcagttggacattctggagtcccttttcggcaagacgcgctaccca
gacattttcatgcgggaagaagtcgcactgaaaatcaatttgcctgagtctagagtccaa
gtatggttcaagaacaggagagccaagtgtcgtcagcaggcccagagtggaaacaatgct
aaagtccggcctgccaagaagaagtcctctccaaccagggagagcacaggctcagagagc
agtggtcagttcacccctccggcagtgtccagcaccggctcctcttcctcttcctctgcc
tcgtccggtggctctcatccctccggccacggaggccaaggcctgagcagcacttctacc
tccgtcactgccccagtgtcctccatctggagccctgcgcccatctccccggcccccgca
ccaccctctgtccccgaccccgctcccccaaccagtgcctcctgcatgcagaggtctgtg
tcaggtactggaggcacgtcctcctacccggtgtcctacagccagacagcggcgtcctat
gggcagggctaccccgccccggcgtcaacgggctcctacttcggaggggtggaatgcagc
tcgtacctggcccccatgcactctcaccaccacccccaccatccgcatcagctcagcccc
atgacgggctcctccatgtctggccacccgcaccaccacatagggcagacctcagggcac
caccaccatcaccacccccaccaccaccaggcctacagcggggccggcctggccttcaac
tcctcagactgtctggattacaaagaacaaacggccgcggccgcagcctcttcatggaag
ctcaacttcaacaccaccgactgcttggactacaaagaccaggcctcctcctggcggttc
caagtcttgtga
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