Salmo salar (Atlantic salmon): 106564866
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Entry
106564866 CDS
T04363
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sasa03016
]
106564866
Enzymes [BR:
sasa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
106564866
Transfer RNA biogenesis [BR:
sasa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106564866
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
106564866
NCBI-ProteinID:
XP_013986817
UniProt:
A0A1S3L787
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All DBs
Position
ssa12:complement(26065039..26077164)
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AA seq
544 aa
AA seq
DB search
MLPLKEKDRPIVKKLLEAGCCARCVLRFCCLGLQSAYRQSYEDTARELCAFISDSENNES
QVAAVLEQHTEDPPSKKMKMDAAEMDVQSEGDSAVVPTVMEEGDAEPADSDVCVVCLGVL
QQFCDEAYAIKISEVVKAKNYQFDTMVLSVSLPAQLSVREHSCWLHVKKEVREKSMCLDM
DDVIQVKEAFKWTMQGLVSKELGGVPVVNKISRQTEQFEVGVGFTHPETDSDCHFLAGIC
SDCFRPTKNKQFVSQQNVFTRMAVVKALEKVSDEKFLKKFPCPPTRPVSKCIAQDVQCLH
VSVFVAGRYNKFSRTLPQTPWVIDGERRMESSVEELIAAPLLSSFRAEGFNFSSSGREDV
DVRTLGNGRPFALELLNPHRARFNKAEVRQLQETINQSSDKIRVRDLQIVSRDAMGHMKE
GEEDKTKSYTALIWTQKAINKDDITFLEETKELKLAQKTPLRVLHRRPLAVRERVIHTMS
TCFLDAHHFHLKLRTQAGTYIKEFVHGDFGRTKPNLCDLLKSETDILELDVESVDVDWPP
SIPE
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccttgaaggagaaagatagaccaatagtgaagaagctgctggaagcaggatgc
tgcgcccgttgtgtcctgaggttctgctgcttgggtctgcagtcggcctaccgccagtct
tatgaggatacagcaagggaactttgtgctttcatcagtgattcagagaataacgaatcc
caagttgcagccgtgctggagcagcacacagaagacccccccagtaaaaaaatgaagatg
gatgccgcagagatggacgtccaatcagaaggcgactctgctgtggttcccacggtgatg
gaggaaggcgacgccgagccagcggactcggacgtgtgtgtggtgtgcctgggagttcta
cagcagttctgtgatgaagcctatgccataaagatatcggaggtggtgaaggccaaaaac
taccagtttgacacgatggtactgtccgtctccctaccggcccagctgtctgtcagagag
cactcttgttggctgcatgtaaagaaggaagtgagggagaagtctatgtgccttgatatg
gatgatgtcatccaggtgaaggaggccttcaagtggaccatgcagggtctggtgtccaaa
gagctggggggcgtacctgtggtgaacaagatcagtcgacaaactgaacagtttgaggtg
ggcgtggggttcacacacccagagacagactcagactgccacttcctggctggcatctgt
tcagactgcttcagaccaactaagaacaaacagtttgtctcacaacagaatgtcttcact
agaatggccgtggtcaaagccctcgaaaaggtttcagatgagaagtttctaaaaaagttc
ccctgtccccctacaaggccagtgagcaaatgcatcgctcaagacgtccagtgtcttcac
gtttctgtatttgtggcggggaggtacaacaagttctcccgcaccctgccccagaccccc
tgggtgattgacggagagaggaggatggagtcctcggtggaggagctaatcgctgccccc
ctcctctcctctttccgggccgaggggtttaatttctcctcctcaggaagggaggatgtg
gatgtgcggacgcttggaaatggtcgtccgtttgcactggagctgctaaatcctcacaga
gccaggttcaataaggcagaggtccgacagctgcaggagaccatcaaccagtcctctgac
aaaatccgagtacgagatctacagatcgtaagcagagatgctatgggtcacatgaaggag
ggtgaggaggacaagaccaagtcgtataccgcgctcatatggacccagaaagccatcaac
aaagacgacatcacgttcttagaggaaaccaaagagttgaagctagctcagaagacgcca
ctaagagtgttgcatcgcaggccactggctgtcagagagcgggtcatccacaccatgagt
acatgcttcctggacgcgcatcacttccacctgaagctgcgcacgcaggcagggacttac
atcaaggagtttgtccacggagactttggtcgcaccaagcccaatctgtgtgatctgctg
aagtctgagactgatatcctagagctggacgttgagtctgtagatgtggactggccaccc
tccatcccggagtga
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