Salmo salar (Atlantic salmon): 106565042
Help
Entry
106565042 CDS
T04363
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6-like
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106565042
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106565042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
106565042
NCBI-ProteinID:
XP_013987109
UniProt:
A0A1S3L9F4
LinkDB
All DBs
Position
ssa12:32841927..32978947
Genome browser
AA seq
3100 aa
AA seq
DB search
MAFCVLGNKCGGKTQCSAADGLTDAATVKRNMKIQNKDKQMSTIHLLKHTPATAASTATD
QNAQTQFPSGPLGSKDQIRVLGGGQINHCMSHAKHPRMGEAGTSSGSLSPCAPSSPLNSE
EDDGGGGRRAKKKRKKKDKKGEPGAAWQHKGSEKDNKPKKKRQQKEGKELLPCKSKAPMK
LEVKVKEGKSPKEAPKEVKRGRKPKVQVQAPPLVKPPAKCKSAPSPPRQRGRKPREQVLQ
GPVPVEKKKKGKRKSVAVLQEAGESDDAASLSTLVVGGEESIDPLDNTKRRSGRQVKRRK
YNEDLDFKVVDDDGETIAVLGTGRIPALNAATLAWQAEEPPEDEANIIEKILSVRTAKKE
ASPEETPEESEEFYVKYRNFSYLHCKWATLEDLEKDPRIHQKIKRFRTKQAQMKHIFVEP
DEDLFNPDYIEVDRVLEVAITTDTETGEEVTHYLVKWCSLSYEEATWELQEDVDPGKIRE
FEEIKRIPEYKFVERPQPDKWQKLDKSKDYRNGNQLREYQLEGMNWLLFNWYNRKNCILA
DEMGLGKTIQSITFLFEMFSMGLRGPFLIIAPLSTITNWEREFRTWTEINVIVYHGSQIS
RQMIHQYEMYHKDQQGNIVSGGYKFHGVITTFEMIMADCPELKKIHWRCVVIDEAHRLKN
RNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPLQFPSESLFLEEFGDLKTE
EQVKKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNMQKKYYRAILEKNFTFLAKG
ANQHNMPNLINTMMELRKCCNHPYLIKGAEEKILDSFRKTHSPDAWDFNLQAMIQAAGKL
VLIDKLLPKLIAGGHKVLVFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRF
CKVDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVY
RLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGMQQMTKIEVEDLLRKGAYGALM
DEEDEGSKFCEEDIDQILQRRTQTITIETEGKGSTFAKASFVSSGNRTDISLDDPNFWQK
WAKIAELEIDSKAEKESLVIDTPRVRKQTRHYNSFEDDELMEFSELDSDSEERPCRTRRL
SERNRHYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWQLAECDIEVLCRSLLVYCVRHY
KGDDKIKSFIWDLITPAKDGHKQDLQNHSAGLSAPVPRGRKGKKLKNQLSVPEMKHADWL
VNCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAAAQFLEGIPASKLEVAL
PDIDYIEIPAGWWDAEADKSLLIGVHKHGYERYNAMRADPELCFLERVGMPDVTALSAEQ
SGGEVMADLTDSNCKSDDVKDDPESKQEEGGVERVDNKDETSSSNDAMDKHDIVVQDTGH
RVQEGFGQEELGQEGMELKGRPLWPAGPNLTARLRRLITAYQRFMRREPLRHDFLLPGAS
PGPMSWQLGEELRHCTATAAKPDPLFLEWQRRWVMMSEQRWTRREQADFYRTVSSFGVVY
DPEKKTFDWSQFRSFARLERKTDESLERYFSSFVSMCRTACRLPPRKDEGPLDHNLFVEP
ITEERAARTLYRIELLRKVREQVLRHLLLGPRLQLCRPSLYLPVWWECGKHDRDLLIGAA
RHGLSRTDYYILNDPQLSFLEAHRNYVQKENHKGYHPGVHHAGMTPSPHHHPCCLYETGL
GQCHSPQPPEYHHPATPSSSSSIHAHSHPHIHVHGHPPEIVGTDPGGSLGMVSGPREGFL
DCPPLDESLELASLQQEGLASDSLHCKSAKEAFNGFPFNSAQGGQSMLNSYGVQGELNGE
QSAEMDPIISGKLRSDVLVGEQGSSEETGLMAPSLELDQELQAPWESTDHAGAADIFNDA
DPILGAPALETAFLDPEEQPGDGGREDRAGGVLDDCLGIPPSRSGPGEPLPSSFMLFKDI
GVNEEEPAEEHTDLSASCPSPYVPPPPLSLSHMTLYPHHQGDAEEPEEKLSNSDAVAHMP
SSKEREAEDDVAFEFDKEMSVDSLYLVGPEQGLEASGISCEDSHQEEPFEGACDGTGMGS
PVESFEAALEGPREDTLERDMALGPGEEGLLEGQFEEPLEMSPMDPQEEEPVEGPLEDSC
KDPAREEPFAGPFEEHYDVEPEEASEGPAEAESTFSEHTLPTVDATESLPPSPSVPTSQP
EPQIKLEFPLDPESSESKSDILEPDSTVLTPKLEQAKGLLEVKDEIEERPQKRGKTPASV
VDSYVEVARFAAPMSMCEMPDSLQDAREPTIAQLLQEKALYSFSEWPKDRVIINRLDSIC
HAILKGKWPSSSQQYDSPSSLANTCVPNSVHQRVGFISTRVQPSQSLNFNIPAPSVTRLP
KYKQRGAGECSPGGWRLTSLPLLQERLVAPPYLPELKRGRRSFEYEGVVLSKQCHPGEKM
PLTVPHRDGALLLNGWQEAAMDLSKAGDLGIGGDVAATVGHMSHQVHPSSHKLPAMGGMQ
SVIQSAMQGSVGVDMAGILQAGLIHPVTGQIVNGNLRRDDAFMRRRRGRRRNVEAVDMGF
VKSRGMHVPEQQGRVEVSHSAVSSTSPPECPPGPSTPTQPEVVAIDREAANKGLMEWLRQ
NPNYNMELPTFAPSPGAAMLHSFVERPKQRRHRCKDPTKLDVNSLTGEERVPVVHRSTGR
RLGGAMAPAIKELSRWLDANTEYYVAPDWADVVKHSGFLPEGKFTRILTEPVCRDQGPRR
RGRRPRSEMPKPLLSESPMGPLFMNGSLIGSMDLVSLQNLRNVQGIPLTGLMGFPHGFAV
SAGEDAKNGLSMLPMMLHGIHGAPHMFSVQGLMGQPPTSSAPTSSAAAVTTTTASSAASS
PSRGPSQASSSTQADGSGMQSDRERKREDKQSTEEKQQGAIGSHSIAAITTAAASSSSGV
SSSSGSHLAFNPFLVPGLSHGLLYPHMFLPHGGIMALPGMPSAESSGSPKRKKKRTREEG
VVEEASSHSHLQTDSGPPKTPSDGQTGESKVDQAGPEAREHQMEDNVQEEVTGNDSHASP
EVNPEKSIEEERETEENRVMEDEKLPGDEERESRGAQDSQ
NT seq
9303 nt
NT seq
+upstream
nt +downstream
nt
atggcgttttgtgtccttggaaataaatgcgggggtaaaacccagtgttcggcagctgat
ggcctgactgatgcagcgacggtgaagagaaacatgaagatacaaaataaggacaaacag
atgtctaccatccacttactaaagcacactccagctacagcagcctctactgccacagac
caaaatgcacaaactcaatttcccagcggacctttaggctccaaggaccagatcagggtc
ctaggaggtgggcagatcaatcactgcatgtcccacgccaagcaccccaggatgggcgag
gcgggcactagttcaggcagcctcagcccctgcgccccctcgtcacccctcaatagcgag
gaggatgatggagggggcgggcggcgggcgaagaagaaacgaaagaaaaaagacaaaaag
ggcgagcctggtgccgcctggcagcacaagggctcggagaaggacaacaaaccaaagaaa
aagaggcagcagaaagaagggaaggagctgctgccatgcaagtctaaggcgcccatgaag
ttggaggtcaaggtgaaggaggggaagtcaccgaaagaggcaccaaaagaggtgaagaga
gggaggaaacccaaggtccaggtgcaggccccgcccctggtcaagccccccgcaaaatgc
aagagcgccccatctcctcccaggcagaggggccgcaaacccagagagcaagtcctacaa
gggccagtaccagtggagaagaagaaaaagggcaagaggaaaagcgtggctgtcctccag
gaggctggagagagcgacgacgcggcctccctgtccacgctggtcgtggggggagaggag
agcatcgacccccttgacaacactaagcgtcgctcagggcgacaagtgaagcgcagaaag
tacaacgaggacctggacttcaaggtggtagatgatgacggggagaccatcgctgtgctg
gggacaggccgcatccctgccctcaacgctgccactctcgcctggcaggctgaggagccc
cctgaagatgaggcgaacatcattgagaaaatcctgtcggttcgaactgcgaagaaagag
gcatcccctgaggagacacctgaggagtcagaggagttctatgtcaagtacagaaatttc
tcctacctgcattgtaaatgggcaactttagaggatttggagaaggaccctcgcatacac
caaaaaatcaagcgcttcaggactaagcaggcccaaatgaagcacatatttgttgagcct
gatgaagacctctttaaccctgactacatagaagtggatcgagttctggaggtggccatc
actacagatacagagacaggagaggaggtgacacactacctagttaaatggtgctccctg
tcctatgaggaggctacatgggagcttcaagaagacgtggacccggggaagattcgggag
ttcgaggagatcaagagaatccctgaatacaaatttgtggagagaccgcagccagacaag
tggcagaagctggacaagtccaaagactaccgaaatgggaatcagctgagagagtaccag
ctggaaggcatgaactggctgctcttcaactggtacaacaggaagaactgcatcctggct
gacgagatgggcctggggaagaccatccagtccatcacctttctcttcgagatgttttcc
atgggcctgcgggggcccttcctcatcatcgcccccctctccaccatcaccaattgggag
agggagttccgtacctggacggagatcaatgtcatcgtctaccacggcagccagatcagc
cgccagatgatccaccagtacgagatgtaccacaaggaccagcagggaaacatagtgtca
ggcgggtacaagttccacggggtgatcaccacctttgagatgatcatggccgactgtcca
gagctgaagaagatccactggcgctgcgtggtcatcgacgaagcccaccgcctcaagaac
cgcaactgtaaactcctggagggactcaagctcatgaacctggaacacaaggtcctcttg
acgggtacccctctgcagaactcggtggaggagctcttcagtcttctcaacttcctggag
cccctacagttcccctcagagagcctcttcctagaggagtttggagatctgaagactgag
gaacaggtgaagaagctgcaggccatcctgaagcccatgatgctgcggcgactgaaggac
gacgtggagaagaacctggcacccaaggaggagaccatcattgaggtggagctcaccaac
atgcagaagaagtactaccgtgccatccttgagaagaacttcaccttcctggccaagggg
gccaaccagcataacatgcccaacctcatcaacaccatgatggagctgcgcaagtgctgc
aaccacccctacctgatcaaaggtgcggaggagaagatcctggatagcttcaggaaaaca
cacagccccgatgcctgggacttcaacctccaggccatgattcaggcggcggggaagctg
gtgctcatcgacaaactgctgcctaagctgattgctggcggccacaaggtgctggtcttc
tcccagatggtgcgctgcctggatatcctggaggattacctcatccagaggaggtacacc
tatgagcgcattgatggcagagtgcggggaaacctgcgccaggcggcgattgacaggttc
tgtaaggtggactcggaccgctttgtgttcctgctgtgtactcgtgctgggggcctaggc
atcaacctgaccgctgcagacacctgcatcatcttcgactcggactggaacccccagaat
gacctacaggcccaagctcgctgccaccgcatcggccagagtaaagcagtgaaggtgtac
agactgatcactaggaactcctatgagagggagatgtttgacaaagccagtctgaagctg
ggtctagacaaggccgtgctgcaggacatcaatcgaaagggcagcctcaatgggatgcag
cagatgaccaagattgaggtggaggacctgctgaggaagggggcatatggagcgctgatg
gacgaggaggacgagggctccaagttctgcgaggaggacatcgaccagatcctgcagcgc
cgcacacaaaccatcaccattgagacagagggcaagggctccaccttcgccaaggccagc
tttgtgtcttctggaaacagaactgatatttccctggacgatcccaacttctggcagaaa
tgggccaaaatagcagagctggagattgattccaaagcagagaaggagagcctggtgatt
gacacgcctcgtgtgaggaagcagacacgccactacaactcgttcgaggatgacgagctg
atggagttctcagagctggacagcgactcagaggagaggccctgtcgcacccgccgcctc
agcgagaggaacagacactacctccgtgcagagtgcttccgtgtcgagaagaacctgctc
atattcggctggggtcgctggaaggacatcctgacccacgggcgcttcaagtggcaactg
gccgaatgtgacattgaggtgctgtgccggtcgctgctggtctactgcgtgcgccactac
aagggcgacgacaagatcaagagctttatctgggacctcatcacacctgccaaagatggc
cataaacaggacttgcagaaccactctgcaggtctgtcggccccagtgcccagaggacgc
aagggtaagaaattaaagaaccagctgagtgtgcccgagatgaagcatgcagactggctg
gtcaactgcaacccagaggtggtgctgcatgacgacagctacaagaaacacctcaaacag
cactgcaacaaggtacttctgagggtgaggatgctgtactacctgaaggcggaagtcctg
ggagaggctgctgcccagttcctggagggtattcctgccagtaaactggaggtggcactg
cctgatatcgactacatcgagatcccagcaggctggtgggatgctgaggcagataagtct
ctcctcataggggtacacaaacacgggtacgagcggtacaacgccatgcgggccgaccca
gagctgtgcttcttggagcgggtgggcatgcctgatgtcacagcgctctcagccgagcag
agtggaggagaggtgatggctgacctcactgacagtaattgcaaaagtgatgacgtgaaa
gacgatcctgaaagcaagcaagaggaaggaggagtggaaagggttgataataaggatgaa
accagctccagcaatgatgcaatggacaagcatgacattgttgttcaagacacaggacac
agggtccaggagggctttggccaggaagagttgggccaggagggcatggagctgaagggt
cgccctctgtggcccgctggccctaatcttactgccaggctgcgtcgcctcatcacagct
taccagcgcttcatgcggcgcgagcccctgcgtcatgacttcttgctgccaggggcaagc
ccggggccgatgtcctggcaactgggggaggagcttaggcactgcacggcaaccgctgcc
aaacctgaccctctcttcctggagtggcagagaaggtgggtgatgatgtcagagcaaagg
tggacacggcgtgagcaagcagatttctaccgcaccgtgtcgtcgttcggcgtagtgtac
gacccggagaagaaaacctttgactggagtcagttccgctccttcgctcggctggagagg
aaaacggacgagagcctggagagatacttcagcagctttgtgtccatgtgccgcaccgcc
tgcagattgccccccaggaaggacgaagggcctctggaccacaatctgtttgtagagccc
atcacggaggagcgagcagcacgcactctctaccgcatcgaactgctgcgcaaggtcaga
gagcaggtgctgcgccacctgctgctgggcccacggctgcaactgtgtcggcccagcctt
tacctgcccgtgtggtgggagtgtggcaaacacgaccgcgacctcctgattggggcagcc
cgccacggccttagccgcaccgactactacatcctcaacgacccgcaactctccttcctg
gaggcccaccgcaactacgtccagaaggagaatcacaagggctaccatcctggggtgcac
cacgcaggcatgaccccctcaccccaccaccacccctgctgcctgtatgagacgggcctc
ggtcaatgccactctccccagccgccggagtaccaccacccagccaccccctcttcctcc
tcgtcgatccatgcccattctcacccgcacatccacgtccatggtcacccgccagagata
gtgggcacggatcccgggggcagcctaggtatggtgtctgggcccagggagggcttcttg
gactgcccccctctggatgagtccttggagttggcctcactgcagcaagagggcctggcc
tcagattccctccattgcaagtctgccaaggaggccttcaacgggttccccttcaactca
gcgcagggtggccagagcatgctcaactcgtatggtgtgcagggggagctgaatggcgag
cagtcggccgaaatggaccctatcatctcgggcaagctgcgcagcgacgtgttggtgggg
gagcagggctcctctgaggagacgggcctcatggcgccctcgctggagctggaccaggag
ctgcaggcgccctgggagagcacggaccacgccggcgccgcagacattttcaacgacgct
gaccctatcctgggggcgcccgcccttgagacggcgttcctggaccccgaagagcagccg
ggagatgggggaagggaggacagagcagggggagtgcttgatgactgcctgggtatcccc
ccatcccggagcggcccaggggagccgctaccctccagttttatgctgttcaaggacatc
ggcgtgaacgaggaggagcctgctgaggagcacaccgacctctccgcaagctgcccttca
ccctacgtcccccctccgcccctgtcgctgtcccatatgaccttgtacccccaccaccag
ggtgatgccgaggagccagaggagaagctgagcaactcggacgccgtcgcccacatgccc
agctccaaggagagagaggcagaggatgatgtggcctttgagtttgacaaagaaatgtct
gtggacagtctgtatctggtggggccggagcagggcctggaagcctcaggtatatcatgc
gaggactctcaccaagaggagcccttcgagggtgcctgcgatgggacgggaatgggatct
ccagtagagtcatttgaggctgctctagaggggccaagggaagacactttagaaagagac
atggccttggggccaggggaggaggggcttctagaggggcagtttgaagaacctttggag
atgtcacccatggatccccaggaggaggaaccagtggaggggcctctggaagactcttgt
aaagacccagcacgagaagaaccattcgcagggccattcgaggagcattacgacgtagaa
ccagaagaggcctcagaggggcctgccgaagcagagagcactttcagcgaacacacacta
cccactgttgacgcaacagagtctctgcccccgtccccctcagtccccacgtcccagcct
gagccacagatcaaattggagtttcctctggacccagagagctctgagagcaagtcggac
atcctggagcctgacagcactgtcctcacgcccaaactagagcaggcaaaggggctgctg
gaagtgaaggacgagatcgaggagaggccccaaaaaaggggaaaaactccagcctccgtg
gtggacagctatgtagaggtggcacggtttgcagcccccatgtccatgtgtgagatgcct
gacagtctgcaggacgcgagggagcctaccatcgcccaactgctgcaggagaaagccctc
tactccttctctgagtggccaaaggaccgggtgatcatcaaccgcctggacagtatatgt
cacgccatcttgaaggggaagtggccctcgtccagccagcagtatgactctcccagctct
ctggcaaacacctgtgtgcccaacagtgtgcaccagagggttggcttcatctcaaccagg
gtacagccatcccagagccttaacttcaacatcccagctccttctgtcacccgcctgccc
aagtacaagcaaagaggtgccggagaatgcagcccaggaggctggaggttgacatccttg
cctctcttgcaggagaggctggtggcgccgccctatctgcccgaactaaagcggggtagg
cggtcgtttgagtacgagggcgtggtgctcagtaagcagtgccatccaggggagaagatg
cccctaacggtgccgcacagagacggggccctgctgctcaacggctggcaggaggcggcc
atggacctctccaaggccggggatctgggcattgggggcgacgtggcagccactgtaggc
cacatgagccaccaggtccatcctagttcccacaaactgcctgccatgggcggcatgcag
agtgtcattcagagtgccatgcagggctcggtgggagtagacatggccgggatcctgcag
gcaggtctcatccacccagtcaccggccaaatcgtcaacggcaacctgaggcgcgacgat
gccttcatgcgccgaaggagaggcagacggagaaacgtggaggcagtcgacatggggttc
gtcaagagcagaggaatgcacgtgccggaacaacagggtagggtagaagtcagccattct
gcggtgtcgtccacctccccaccagagtgccccccgggaccctccacacccacccagcca
gaggtggtggccattgacagagaggctgccaacaagggcctgatggaatggctgcggcag
aatcctaactacaacatggaactgcccacttttgcaccgtctcctggcgcagcgatgttg
cacagctttgtggagcggcccaaacagcggagacatcgctgcaaagaccccaccaagctg
gacgtcaactccctaacaggggaggagagggtgcccgtggtccacagaagcactggccgc
aggcttgggggtgctatggctccagcaatcaaggagctctcccgatggctggacgcgaat
actgagtactacgtggcacccgactgggcagatgttgtgaaacactctggctttcttccc
gagggaaagttcacccgcatactcacagagcccgtgtgccgcgaccaagggccccgccgc
cggggccgtcgtcctcgcagcgagatgcctaagcccctcctctcggagtcacccatgggc
ccactcttcatgaacggcagcctgatcggcagcatggacttggtcagcctccagaacctc
cgcaatgtccagggcatcccactcacgggcctgatgggattcccccatggcttcgccgtg
tccgctggtgaagatgccaagaacggcctgagcatgcttcccatgatgctccacggcata
catggcgcgccccacatgttcagtgttcaggggctgatggggcagccgcccaccagctcc
gctcccacctcctcagcggctgcagttaccacaactacggcttcctccgcggccagtagc
ccctcacgaggccccagtcaggcgtcttcgagcacacaggcagatggctccggcatgcag
tctgacagagagagaaagagagaggacaagcagtcgacagaagaaaagcagcaaggcgcg
ataggcagccacagcatcgcagccatcactactgcggcggccagcagcagcagtggcgtc
agcagtagcagtggcagccacctggcctttaaccctttccttgttccagggttgtcccat
ggactgctgtaccctcacatgttcctcccacacgggggcatcatggcgctgccaggcatg
ccgtccgcagagtcctctggcagccctaagaggaagaagaaaagaacaagggaggaaggg
gtggtggaggaggcaagcagccacagccacttacagacggacagtgggcctccgaaaaca
cccagcgatggtcagactggggagagcaaggttgaccaggccgggccagaggctagggag
catcagatggaggacaacgttcaggaggaggtcacaggaaacgactcccatgcttctcca
gaggtcaacccagagaagagcattgaagaggagagagaaacggaggagaatagagtgatg
gaggatgaaaaactgcctggagatgaggagagagagtcaaggggggcacaggattcacaa
tag
DBGET
integrated database retrieval system
