Salmo salar (Atlantic salmon): 106565044
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Entry
106565044 CDS
T04363
Symbol
rbl1
Name
(RefSeq) RB transcriptional corepressor like 1
KO
K04681
retinoblastoma-like protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04110
Cell cycle
sasa04218
Cellular senescence
sasa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
106565044 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106565044 (rbl1)
04218 Cellular senescence
106565044 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106565044 (rbl1)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
106565044 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
106565044
NCBI-ProteinID:
XP_013987117
UniProt:
A0A1S3L821
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All DBs
Position
ssa12:33010439..33054791
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AA seq
1057 aa
AA seq
DB search
MRGDESDSDSGRTDESSVRKSLEMLCQELNMDEQTASEAMQNFKSIWNTYTLEGEVVHWL
ACSLYAACRKGSTPTVGKGVMEGNCVSLTRILRTSKLSLIQFFNKMKKWSDMSNLSQEFR
NRMGRLERTFEVSTVIFRKFEPIFMDMFQDPQGEPPRQPRSRKHRRLPCHVSDVFKFCWT
LFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCSNRKDLVNPLFKGLPSIFRLENN
TPDEPPCVIDRLCELHDGLVVEAKGIKEHYFKPYIKRLFERQILKGNEELLTDLLDTPNF
IDNNKAINREYEEYVLTVGDFDERVFLGADADEEIGTPRKAAPEPRACQLSARMQVESNL
QQHFEKKRTLAPSTPLTGRRYLKEKELLVTPVSSATQSVSRLQSMVSGLRSAPSEALMQI
FKSCSRDPIVAILGRVKTLGETFKQHYTKDSEELPGSHMDFAENRMKLAEILYYKILENV
MAQETRRLHGKDMAVLLEQDIFHCSLMACCLEVVLFAYSSQRTFPWIISIFKLRPFYFFK
VIEVFIRSEEGLSRDMVKHLNSIEEQVLECRAWTADSVLWEALEQAHNKVPTVEEVNFPS
SFDTGNSSAGPSHLPLVALSPIIHPRIREFRTGLSSARKDIPPSPLSVHDRYSSPAAGSA
KRRLFGDDSSSQAQQSPSLAKRLMFTPGGTLKIDTPTILNMTTANGQQLSIPLQGIKNDL
GGITLIQVQTRGEPGSPITAQVLLTASPSRPIPAPQAQPDPQQSRPRRTGSLALFFRKVY
HLASVRLRDLCVRLDISAELRGKIWTCFEHSIVQCPELMKDRHLDQLLLCAIYIISKITK
DGHTFQDIMKCYRSQPQASSHVYRSVLIRPSSTREQPSDENMEVEPTSGGKSLISAAEKA
DQSSREEALVQGEERGDLIQFYNSVYVLKIKGFAIRYAAPSMDNRMEAPPLSPFPSMRAQ
PLSPRRISQRHSIYVSPHKNGSCLTPNSAYTYKINGSPSKELTDINRMIRQGGVSRKRAF
SMEGDYLGESPTKRVCPESEDVLLKRLQDVVSERAHH
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgcggggagacgagtcagattccgactccgggcggacggacgagagttccgtccgaaag
agcttggaaatgctttgtcaggagctgaatatggacgaacagacggcatctgaagccatg
caaaacttcaagtcgatttggaatacatacacactggagggggaagtagttcattggcta
gcctgctctctctatgcagcctgcagaaagggctccacacccactgtgggtaagggggtg
atggaaggcaactgtgtgtccctgactcgaatactcaggacgtcaaaactgagtttgatt
cagttcttcaacaagatgaagaaatggtcggatatgtccaacttgtctcaagaatttcgg
aatcgcatgggccgcctggagagaacctttgaagtgtcaactgtgatctttcggaagttt
gagcccatattcatggacatgttccaggatcctcaaggggaacccccacgacagcctaga
agcagaaaacacaggcgcctgccctgtcacgtcagcgatgtattcaaattctgctggacc
ctgtttgtgtacactaaaggaaatttccgtatgattggcgatgacttggtgaactcatac
cacctcctgctctgctgcttggacttggtgtttggaaatgcccttctatgctccaacagg
aaagaccttgtcaacccacttttcaaaggcttgcccagcatcttcaggttggaaaacaac
accccggatgagccgccatgtgtcatcgatcggctgtgtgagctacacgacggcttggtg
gtggaagccaagggcatcaaggagcactacttcaagccctacattaaaaggctctttgag
cggcagatacttaaagggaatgaggagctgctcacagatctcctggatacaccaaacttc
atagataacaataaagcgataaaccgggagtatgaggagtatgtactgactgtgggggac
tttgacgagagggtgttccttggggcggatgccgacgaggagatcgggacacccaggaag
gctgcaccagaaccccgggcctgccagctgtcagcccgcatgcaggtggagagcaacctg
caacagcactttgagaagaagcgcacccttgccccctccactcctctgacaggcaggcgt
tacctgaaggagaaggagctactggtgacccctgtgtcctcggccacgcaaagcgtcagc
cgactccagagcatggtctcgggcctgcgtagcgcccccagcgaggccctgatgcagatt
ttcaagtcatgttcgcgggaccccatcgtagctattctgggcagagtaaaaaccctgggc
gagacgttcaagcaacattacacaaaggactcagaggaactgcctggatcacacatggat
tttgctgagaacaggatgaagctggctgaaatcctctattacaagatcctcgagaatgtc
atggcccaagagacaaggaggctacacggcaaagacatggctgtgctgctggagcaggac
atcttccactgctctctgatggcctgttgtcttgaggtggtgctgtttgcctacagctcc
cagcgcaccttcccctggatcatcagcatcttcaaactacgaccgttctacttctttaag
gtgattgaggtgttcatccgctcggaggagggtctgtcccgggacatggtgaagcacctg
aactccatcgaagagcaggtgctggagtgccgggcctggacagcagactctgtgctgtgg
gaggccctggagcaggctcacaacaaggtccccaccgtggaggaggtgaacttccccagt
agttttgacacggggaacagcagtgctggtccctcccacctccctctggtggccctctcc
cccatcatccacccccgcatccgcgagtttaggacgggcctgagcagcgcacgcaaagac
attcctccgtcgcccttatccgtccacgaccgttacagctccccggcggcgggcagtgcc
aagcggcgtctgtttggggacgacagcagcagccaggcccagcagtccccgtcccttgcc
aagaggctcatgttcacgcccggcgggacgctgaagatcgacactcccaccatactcaat
atgaccacagccaacggccagcagctcagcatcccactgcaaggtataaagaatgatctg
ggaggcatcacactgatccaggtgcagaccagaggggagcccggcagtcccattacagcc
caggtcctcttgacagcctcccccagccggcccattccggcaccccaggcccagccagac
ccccaacagagccggccccgacgcaccggctccttggccctcttcttcaggaaggtgtac
cacctggccagtgtgcggctgagagacctgtgcgtgaggctggacatctctgcagagctg
cggggcaagatctggacttgctttgagcactccatcgtccagtgtccagagctgatgaaa
gacagacacctggaccagctcctcctttgtgccatctacataatctctaagattacgaaa
gatggccacacattccaggacatcatgaaatgttaccgcagtcaaccacaagccagcagt
catgtctaccgcagtgtcctcatccggcccagcagcaccagagaacagccctcagacgag
aacatggaagtggaacccacctctggtggaaaatccttaatttcagctgctgagaaagcc
gaccagagcagcagagaggaggctcttgtccaaggcgaggagcgaggcgacctcatccag
ttctacaactctgtctatgtgctgaagattaagggctttgccatccgatacgccgccccc
agcatggacaacaggatggaggcccctcctctgtccccgttcccctcgatgagagcccag
cccctgtccccccgccgcatctcccagagacactcgatctacgtgtccccacacaagaac
ggctcctgtctcacccccaactctgcctacacctacaagatcaacggcagcccctccaaa
gaactgactgacatcaaccggatgatccgccagggcggggtgagcaggaaaagggccttt
tccatggagggcgactacttgggcgagtcccccaccaaacgggtgtgtcccgagagcgag
gatgtgctgctcaaacgtctgcaggacgtggtcagcgagagagcccaccactga
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