Salmo salar (Atlantic salmon): 106565086
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Entry
106565086 CDS
T04363
Name
(RefSeq) fibromodulin-like
KO
K08121
fibromodulin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
106565086
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sasa00535
]
106565086
Proteoglycans [BR:
sasa00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
106565086
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Gene cluster
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_9
LRR_LRWD1
LRR_14
LRR_5
Motif
Other DBs
NCBI-GeneID:
106565086
NCBI-ProteinID:
XP_013987244
UniProt:
A0A1S3L9U0
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Position
ssa12:complement(47874170..47878299)
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AA seq
351 aa
AA seq
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MSGLCVFLLACVLPLSLASPDRQDPFLWLSALRGRGYVEGSLLADTTGGECPAECDCPPS
FPIAMYCDGRGLTAMPNVPSRMKYLYLQHNEISAMPDSALANATNLVWVMMHHNALSTDK
IGKRVFAKLQGLERLYLQHNNLTRVPPNLPRSLRDLRLNNNNINKITPAALDGMDNLTIL
YLHDNALTEMGMSLRGLNSLTLLDVSGNKLKKVPDSLPERLHQLYLESNAISAVPEGFLS
KFSQLQYIRMAHNQLTDNGIPPNTFNVSGLVELDLSFNQLERIPLVSQTLEHLYLQANHI
KEFTLGSFCGVVDIMNFSKLRTLRLEGNEISTGDVPSESALCLRLANSIDV
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgagtggattgtgtgtgttcctcttggcgtgcgtcctgccgctatccctcgcctcgcca
gacaggcaggacccgttcctctggctgtccgccctgcgtggtcgtggttatgtcgagggc
tccctattggctgacaccaccggaggggagtgtcctgcggagtgtgactgcccaccatcc
ttccccatcgctatgtactgtgacgggcgtggcttgacagccatgcccaatgtgccctcc
aggatgaagtatctgtacctgcagcacaatgagatctccgccatgccagactctgccctg
gccaatgccaccaaccttgtctgggtcatgatgcatcacaacgcgctgtctacggacaaa
atcggcaagagggtgtttgccaagctgcaggggttggagcgtctgtaccttcaacataat
aacctgactcgtgttccccccaacctgccgcgctcactacgggacctcagactcaacaac
aacaacatcaacaagataacaccagcggcccttgatggcatggacaacctgaccatcctg
tatctccatgataacgctctgacagagatgggcatgtctctgaggggtttgaactcactc
actctgcttgatgtcagcggcaacaagctgaagaaggtaccagatagtctcccagagcgc
ctccaccagctgtacctggagtccaacgccatcagtgctgtcccagagggtttcctcagt
aagttctctcagctgcagtacatccgcatggcccacaaccagctgaccgacaatggcatc
ccccccaacaccttcaacgtgtctggcctggtggagctggacctcagcttcaaccaactg
gagaggatccccctcgtcagccagacgcttgagcacctctacctgcaggccaaccacatc
aaagagtttaccctggggagtttctgtggtgtcgtggacataatgaacttctccaagctg
aggacactgcgtctggaggggaatgagatcagcaccggcgatgtcccctcggagtcggca
ctctgtctgcgtctggctaacagcattgatgtgtaa
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integrated database retrieval system