Salmo salar (Atlantic salmon): 106565095
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Entry
106565095 CDS
T04363
Symbol
nfasc
Name
(RefSeq) neurofascin
KO
K06757
neurofascin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106565095 (nfasc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106565095 (nfasc)
Cell adhesion molecules [BR:
sasa04515
]
Immunoglobulin superfamily
L1 family
106565095 (nfasc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Ig_4
C2-set_2
Ig_6
BiPBP_C
DUF3792
Motif
Other DBs
NCBI-GeneID:
106565095
NCBI-ProteinID:
XP_013987257
UniProt:
A0A1S3L8H1
LinkDB
All DBs
Position
ssa12:47356315..47505873
Genome browser
AA seq
1365 aa
AA seq
DB search
MLAQGGPWALSVISLVLLLWQEVSAIDVPLDSKIQQDLKQPPTIMKQSLKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFFNVGKDPRVTMRKRSGTLEISFRSGGRPEDYEGEYQCF
ASNDFGTALTSKILLRVSKSPLWPKEVLEPVVVSEGSPLVLACNPPPGLPPPLTFWMDSA
MMPITQDKRVSMGLNGDLYFSNVLAKDSHTDYSCNARFLFTHTIQQKNPFTLKVQTKEPY
NDTSSVNSTDPYGGRKVAVTTPNFLSPTGTDSSRMVMRGEKLNLECIASGVPTPSIKWFK
KGGDLNQKVKLDNFNKTLRIDSVSEEDAGEYMCMANNQIGSIRHSIYVQVKAAPYWLDQP
SNLVLAPDENGRLVCRANGNPKPHIQWLVNGEPIESDSSLPNPSRSVVGDTIMFRSVQIG
SSAVYQCNASNDHGYLLANAFVSILDMAPRMLGPKNQLIKVIENNRTFLDCPYFGSPLPE
LRWFKNGQGSGLDGGHYRVYINGTLEIKRARAEDQGTYTCVASNILGKEENQVRLEVKEP
TRIVRAPEHQSAIRGTMARFDCRVKSDLTLPITVTWLKDDKPLSLGSRLKKDEDSLSIPN
VHEGDEGTYTCTVRTEIDQDTASARLTVLEDASLSPSQSSVLPTDRPDAPMDLELSDPEA
RNVRLTWIHGDDHNSPVTLFVVQFEEDRWQSGKWQNLSSYPGDFNSVILELSPFVNYQFR
VIAVNSVGQSRPSLPSQRYQTSGAPPDVIPSGLKGWGTKKNNMEISWEPLLDTERNGPNL
NYSVWWRRKDTGEEWSNVTTVGTKHIVHDTETYVPYEIKLQAVNDFGLGRESNIIIGYSG
EDKPTAPPTDLRVSKIDSTKVNVHWTPVDPSTVLGEFKEYRVYYWREGSMVKGLRVNKEK
RTKGFYSTVAQPTGILTDLQPYSHYRIYMVVANNRYEGPPSNHVEFRTKEGVPEAPKFFK
IIQRSTDVIHLEWDKPLEPNGILIGYKLRYQTVNGSRVGLMQMESFLPNVTTYTLRLPER
GIRYKFYLAALTQVGAGEVYAEESPHFTNEEDFFSSVEPTDVSVSTTFPPPPPTSTAATT
TISTSTTTPPTTTTTTTTTITTTTTTTTAATTSTTPVLVTSTKQAHTNVLVGMAPGSVIW
NLTVEPNSNYANVSWNHNFPAGSSEFQLEFTLDSNGSMSRVPVNQPPIKLAGLIEGAKYH
LRVYSNEYHSITSNVVTFETSAAYSKDQVDIATQGWFIGLMCAIALIILILLIVCFIKRS
RGGKYPVREKKDLPLDAVDQKGEDGSFDYHSDEDNKPLQGSQNSLDGGVKESDDSLVDYG
EGGDGQFNEDGSFIGQYTVKKDKDETEGNESSEATSPVNAIYSLA
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgcagggcgggccttgggccctgtctgtcatatcactggtcctgctgctgtgg
caagaagtgtctgctatcgatgttcctctcgattcaaagatccagcaggacctgaagcag
cctcccaccattatgaaacagtcattgaaggactacattgttgatcccagagataacatc
atcattgagtgtgaggccaaggggaaccccgtgccaacgttctcatggcgacggaacggg
aagttcttcaacgtggggaaggatccgcgggtgacgatgcggaagcgctcaggaacgctg
gaaatcagcttccggagcggagggaggccagaggactacgagggagaataccagtgtttt
gcctccaacgactttggaacggcgctgaccagcaagatcctactacgagtgtccaagtct
cctctgtggcctaaggaggtgttggagccagtggtagtaagtgagggatctcccctggtc
ctggcctgtaaccctcctcctggcctgccccctccgctcaccttctggatggacagcgcc
atgatgcctataacccaggacaagcgtgtgtccatgggcttgaatggagacctgtatttc
tctaacgtgctggctaaagactcccacacagactacagctgcaacgcccgattcctcttc
acacacactatccagcagaaaaaccccttcacactcaaagtgcagaccaaggagccgtat
aatgacacttcctctgtcaactccactgacccgtacggtggtcgtaaggtagcagtgacc
acccctaacttcctctcccccacggggactgacagctcgaggatggtgatgagaggtgaa
aagctaaacctggagtgtatcgcttccggagttccgactcccagtataaagtggtttaag
aaggggggcgacctgaaccagaaggtgaagctagacaacttcaataagactctgcgtatc
gacagtgtgtcagaggaggacgcaggggagtacatgtgtatggccaacaatcagatagga
agcatccgacactccatctacgtccaggttaaagcggctccctattggctggaccagccg
tccaatctggtgttagcgccggatgagaacggtcgtctggtgtgtcgggccaatggaaac
cccaaacctcacatccagtggctggtcaacggagagcctatcgaaagcgatagctccttg
cccaaccctagcagatcggtggtaggtgacaccatcatgttccgctccgttcagatcggc
agcagcgctgtgtaccagtgtaatgcctccaatgaccatggttacttgctggccaatgca
ttcgttagcatactggacatggcccccagaatgctgggtcctaagaaccagctgataaag
gtgatagagaacaacagaaccttcctggactgtccctattttggctcgccacttcctgag
ctgcgctggtttaagaatggtcaaggaagtggtctagatggtggtcactatcgggtctac
atcaacgggaccctagagatcaagcgtgcacgggctgaagaccaggggacctacacctgc
gtggccagcaacatcctgggcaaggaggagaaccaggtccgcctggaggtcaaagagccg
acacgtattgtcagggctccagagcaccagtcagccatcagaggcaccatggctcgtttc
gactgccgggtcaaatcagacctcactctgcccatcactgttacctggctgaaagatgac
aaacccctctccctgggatcgaggttgaagaaggatgaggattctttgtccatccccaat
gtccatgagggagatgagggaacatacacctgcactgttagaacagagattgaccaagac
actgcctcagcacgccttactgtgttagaggacgcctccctgtctccctcacagtctagt
gtcttacctacagaccgccctgacgctcccatggacctggagctgtctgaccctgaagca
cgcaacgtgcgactcacctggatccatggagatgatcacaacagccccgtcacactgttc
gtggttcagtttgaggaggaccgttggcagtcgggcaagtggcagaacctgtctagttat
cccggagacttcaactcggtcatcctggagctctctcctttcgtcaactaccagttcaga
gtcatcgctgtcaattctgtgggccagagccgccccagcctcccctcgcaacgataccag
accagcggagctcctcctgatgttatccctagtggcctgaaaggctggggcaccaagaag
aacaacatggagatcagctgggagcccttgttggacacagagcgaaacggccctaatctg
aactactcggtgtggtggcgacggaaggatacgggggaggaatggagtaatgtgactaca
gtggggacgaagcacattgtccacgacacagagacctacgtaccctatgagatcaaactg
caggctgtgaatgactttggactgggacgcgagtccaacatcatcataggatactctggg
gaggacaagcccacagcccctcccactgacctgcgagtgtctaagattgacagcaccaag
gtcaatgtccactggaccccggtagatcccagcactgtattgggagagttcaaggagtac
agggtgtactactggcgtgagggcagcatggtgaagggtctgcgtgtgaataaagagaag
aggactaaagggttctacagtaccgtggcccagcctactggcatactgacagacctacag
ccatacagccactaccgcatatacatggtggtcgccaacaatcgctacgagggaccgcct
agcaaccatgtggagttccgtaccaaggaaggagtgccagaagctcctaagttctttaag
atcatccagaggagtacagatgttatccacctggagtgggacaaacccctggagcctaac
ggcattctgattggatacaaactcagataccagacagtgaacgggtcacgtgttggcctt
atgcagatggagagtttcctacctaacgtgacaacgtacacactccgtctgcccgaacga
ggcatccgctataagttctacctggcggccctcacacaggtgggagcaggggaggtctac
gctgaggagtctccacacttcaccaatgaggaagattttttcagctcagtcgagcctaca
gatgtgtccgtgtctacaactttccctccacctcctcccacttctaccgctgctactaca
accattagtacctcaactactactccccctaccactactaccactaccactactactatt
actactacaactactaccactactgctgcgactacttctaccactcctgtgctggttacc
agcaccaagcaagcacatacgaatgtgttggtaggcatggctcctgggagcgtgatctgg
aacctgacggtggagcctaacagtaactacgctaacgtcagctggaaccacaacttcccg
gccggcagcagcgagttccagctagagttcacactggacagcaacggcagtatgtcaagg
gtacctgtgaaccagccgcccattaagctggcgggactgatcgaaggggccaagtaccac
ctgagggtgtactccaacgaataccacagcatcaccagcaatgttgtcacctttgagacc
agcgcagcctacagtaaagatcaggtggacattgctacccagggctggttcatcgggctg
atgtgtgcaattgctctcatcatcctcatcctcctcatcgtctgcttcatcaagaggagt
cgcggaggcaaatacccagtgcgagaaaaaaaagatctccctctggacgcagtggatcag
aaaggagaggacggatcatttgactaccacagcgacgaggacaacaagcctctgcagggc
agccagaactctctggacggcggggtgaaggagagtgacgacagcctggtagactacggc
gagggaggggatggccagttcaacgaggacggctccttcattggccagtacacagtcaag
aaggacaaggacgaaacagagggcaacgaaagctctgaggccacctcacccgttaacgcc
atctactcgctggcataa
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integrated database retrieval system