Salmo salar (Atlantic salmon): 106565121
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Entry
106565121 CDS
T04363
Name
(RefSeq) laminin subunit beta-3-like
KO
K06244
laminin, beta 3
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04382
Cornified envelope formation
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106565121
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106565121
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106565121
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
LAMB1
KASH_CCD
hEGF
GldM_1st
DUF745
GEMI5_RBS
Motif
Other DBs
NCBI-GeneID:
106565121
NCBI-ProteinID:
XP_013987348
UniProt:
A0A1S3LA41
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Position
ssa12:45889137..45930651
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AA seq
1152 aa
AA seq
DB search
MWILFQLAALTAVAATQRDCSRGACYPPMGDLLLGRDRQLHASSTCGLAGSEVFCTYFGQ
WRMKCCTCDSRNPSSQLAHTIQNVLSTAGPNRWWQARKDVSPVTLQLDLQNLFQLDTIIL
TFKGPHPSALVVERTLDNGQTWQPSHYMASDCRSAFPGIAMTTPRSLDQTYCYTLPPVPA
NSYQDQTIQFSPLRQFSSISVPNGQKIEEVSGLTGLRVKLTELGAMPRLPGRTPSLFYAL
REMRVMGTCLCHGHANRCLQDTTANQPPSTQVSAQCECQHNTAGVNCERCADLYNDLPWR
SAEEGNTHTCKRCECNNHAQRCRFDPSVYEASGWRSGGVCEGCLHHTTGPKCDRCAPGYQ
PNHLSSIDQPDACTRCHCSAEGAENGGRCDDVTGSCRCKMGYYGLTASNPLGCTKCLCSA
EGSLSSVCDPVSGQCPCRPYHQGLTCELCSRGYWNPSSPRGCEPCRCDPTNSHGDTCDQS
TGQCQCRSGFGGRTCTECPDNTYGDPLIGCRPCQCAAGGMVPGGCDKRTGACRCRIGVIG
IRCDACSRGHVYSFPDCEVCPSCFFSLDSYIQNLTLGLERLSTRIPSRPGGSLPTGLGLR
IQALEATLIQIRDSLPLPTPSTRQVNDALSQLRRLRDQLDQVDGDLSPQGRGLELGSQLD
ELQALLGGLGLLYNAKRDALRNPINSNNAGALSSIKNAYDESTDAAKTVEASGKTVDQSS
AVREDSLDLQNQVQPANTRDLEKLNQQLNTKPDLSPTAKQVCGSVRSAPCTPAQCDGELC
PAEGAPPCGRGESCVGALPLGTRAVRDAEEVKDRLQQLNGKITQAAAQIQKTQDTVNLVR
KSTDDLVNQMRRARDDLEADLRETRYFVKELKDFLSDPSSDPTDISTVSEWILNAKLPLS
LAALKRKLQDIRALAAGLPDSKAVLDQAGPQLDIARRLLQEAQDARDAGLGVKDDVDGLL
EGFTVVEGSLSGLNDKVQDSLDIVEDISNSLAQTKAQLTPAVKALGEASALTEGMKPQLE
GLKALVRSGGLLAQNAKGEANKANKEADAATRDLASLEKQLEQLRAAERTSGHGDGTGTT
GERLRKLQEEAGSLAQDTGDMMKALAGKADSLRRLQDEVLLKSQRLTGLDGNLRDLLADM
RQKIKILSTCQG
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgtggattttattccagttagcagccctgacggcagtggctgcgacccagagggactgt
tctcggggggcctgttacccccctatgggagacctgctcctcggtagggaccgtcagctt
catgcctcctccacctgcggccttgccggctctgaggtcttttgcacctactttggacag
tggaggatgaagtgctgtacctgtgactccaggaacccatcaagtcagttagctcacacc
atccagaacgttctgtccaccgctggacccaacaggtggtggcaggccaggaaagatgtg
agtccggtcaccctacagttggacctacagaacctgtttcagctggacaccatcattctg
accttcaagggtccccaccctagtgcgctggtggtggagaggacgttggataatggtcaa
acctggcaaccgtcccactacatggcctcagactgtcgctcggccttccctggcattgcc
atgactacgccacgctctctggaccagacctactgctacaccctcccccctgtccccgct
aactcttaccaggaccagaccattcagttcagccccttgcgtcagttctctagcatcagc
gtccccaatgggcagaagattgaagaggtgtccggattgacaggcctgcgggtgaagttg
actgagctgggtgctatgcctcgcttgcccggccgcaccccctctctgttttatgccctc
agagagatgagagtgatgggcacctgcctctgccacggccatgccaaccgctgtctgcag
gatactactgccaaccagccacctagcacacaggttagtgctcagtgtgagtgccagcac
aacacagcaggtgtaaactgtgagcgatgtgctgatctctacaatgacctgccctggaga
tctgcagaggagggaaacacacacacctgcaaacgttgtgagtgtaacaatcacgcccag
cggtgccgttttgacccatctgtgtatgaggcgagcggatggaggagtgggggggtgtgt
gagggctgtctgcaccacacaaccgggcccaaatgtgacaggtgtgcccctggataccaa
cccaaccacctgagcagcatagaccagcctgatgcctgcacacgctgccattgcagtgca
gagggggcggagaatgggggtcggtgtgatgatgtcacagggtcgtgtcgctgcaagatg
ggatactatggcctgaccgcctccaaccctctgggctgcacgaagtgcttgtgcagtgca
gagggctccctgtccagtgtgtgtgaccctgtgagcggtcagtgtccctgtcgaccttac
caccaggggctgacctgtgaactctgttcccgtggttactggaacccctcctccccccgc
ggctgtgagccctgtcgctgtgaccccaccaactcccatggtgacacctgcgaccagagt
acgggtcagtgtcagtgcaggtcagggttcggaggtcgtacctgtacagaatgccctgat
aacacttacggagaccccctcattggctgcagaccgtgtcagtgtgctgctggaggcatg
gtaccaggaggctgtgataagcgtacaggggcctgccggtgccgtattggtgtcataggt
attcgttgcgatgcctgtagccgtggccatgtttactcctttcctgactgtgaagtctgc
ccctcctgcttcttctctctggactcctacatccagaacctcaccctgggcctggagaga
ctctccaccaggatcccctctcgtcctggcggctcgttgcccaccggtctgggtctccgc
atccaggccttggaggccactctcatccagatacgtgactctctcccactcccaactccc
tctacgagacaagtcaacgacgccctctctcagctacgcagactaagggaccagttagat
caggtggatggggatctgtcaccccaaggcagaggcctcgagctgggctcacagctggac
gagttgcaggctctcctgggcggcctgggtctgctgtacaacgccaagagagatgctctc
aggaaccctatcaactccaacaatgcaggggccttgtcttctataaagaatgcctatgac
gagtccacggatgcggcaaagactgtggaggctagtgggaagactgtagatcaatcttca
gcggtcagagaggactctcttgacctccagaaccaggttcaaccagcgaacaccagagac
ctggagaaactcaaccagcagctgaacaccaaacctgacctctcacccactgccaagcag
gtgtgtggcagtgtgcgctctgccccttgtacccctgcccagtgtgatggtgagctgtgc
cctgcggagggggcgccaccctgtggtcgcggcgagagttgcgttggggctctgcctctg
gggacccgagctgtgagggatgctgaggaggtaaaggacagactgcagcagctcaatggg
aagatcacacaggctgctgcacagatccagaaaacacaggacacggtcaatctggtcaga
aagtccacggacgatctggtcaatcagatgaggcgggccagggatgacttggaggcagat
ctgcgggagacaagatactttgttaaagagctgaaggacttcctgtcagacccgtcgtca
gacccgacagacatcagcacggtgagtgaatggatcttgaacgcaaagctgcctctcagt
ctggcagctctgaagaggaagcttcaggacatcagagccctggcggcaggactcccagac
agcaaagcagtcctggaccaggctggaccacagctcgacatcgcccggcgcctgctacag
gaggcccaggacgccagggatgctgggctgggtgtgaaggatgatgttgacgggctgctg
gagggcttcaccgtcgtggagggctctctctctggcctgaacgacaaagtgcaggacagc
ctggacatagtggaagacatcagcaacagtctcgcacagaccaaggcccagttgactccc
gcagtgaaggctctaggggaggcgtctgccctgactgaggggatgaaacctcagctggag
gggctcaaggcgctggtgcgctctggaggtctgctggcccagaatgctaagggagaggcc
aataaggctaacaaggaggcagatgctgcgaccagggacctggcgtccctggagaagcag
ctggagcagctgcgtgccgcagagaggaccagtggtcatggcgatgggacggggacgaca
ggtgagcgtctccggaagctgcaggaggaggctggttctctggcccaggacactggagac
atgatgaaggcactagcaggtaaagcagactctctgcgtagactacaggatgaggtccta
ctgaagtcccagaggctgaccggtctggacggcaacctgcgggacctcctggctgacatg
agacagaagatcaagatcctctccacttgccagggctga
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integrated database retrieval system
