Salmo salar (Atlantic salmon): 106565123
Help
Entry
106565123 CDS
T04363
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48-like
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sasa01002
]
106565123
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106565123
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106565123
Peptidases and inhibitors [BR:
sasa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106565123
Ubiquitin system [BR:
sasa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106565123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Usp-48
Motif
Other DBs
NCBI-GeneID:
106565123
NCBI-ProteinID:
XP_013987354
UniProt:
A0A1S3LA46
LinkDB
All DBs
Position
ssa12:complement(45835873..45866462)
Genome browser
AA seq
1051 aa
AA seq
DB search
MAPRVQLEKAAWRWVESVRPEDIQREHIEIAYRICVPACKRGACRRNCKGNPNCLVGIGE
HAWLGEIDENTFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRRTLYLC
QNTRAEEHDMDSDYEPRSICEHLQYLFALLQNSNRRYIDPSGLVKALGLDTGQQQDAQEF
SKLFLSLLEDTLSKQKNPNLHNVIQQQFCGQMSYVTVCNQCGRASPLPSRFYELELNIQG
HKNLTECVTEFLKEEKLDGDNRYFCESCQSKQNAARRIKLHSLPRVLNLQLMRFVFDRQT
GHKKKLNTFISFPEQLDMGPFLEEKEDEKCVYELSAVLIHRGVSAYSGHYIAHVRDARTS
DWYKFNDEEIEKMEGKKLQLGIEEDIAETVKSQTRKPKCSKGYHCSRNAYMLVYKCQREE
DTDPMETNVEVPGFLERLVDRDNRKFEEWCLEMADMRKQSVDKGKAKHEEVKELYELLPA
EDGQEYEFVPLEWLKKWLDDSTVTKEIDNGNFLCSHGKLHPDKVGEAKRISVKAAELLFD
KYGGGPRLDGSTLCEECVGQRCRVLRLKNQLAEDYKEVTNLVKCPPKSDEGYWAGKTSLR
SWRQLALEQLEEDEEETKHSNGKTNGEGPEITATKEYGPENLDGDEEEMKTFNEDILCRH
GGLSILESERRLVTEEVWSKLRVYFPKAPQFTQLQEPCQQCLRLEREGKENEALNRMMAS
EQKSSLLNLFQEKNRPTLTKWPQETDILYIVPLFFVDEWRRFIRRPTKTTPVSSVGNSLL
LCPHRGFMFTFDSMLKGDAQHIALLWPDEWEVISRHFLVDQPISICRISEATPNGSSVEY
TTQPELCRDCREGFIFQQQRDMREYAQATVYVRKVIDDKRLKDAAPEMNVSGSEAEDERE
EPVAKVDGERDPDFSQSEDGAKRQKLSDGTVSAAASPAPMASGGKSGIRRSTRHRKLRGE
KALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGRCLTDDSATLGSLGVIPESVICLKA
DEPIADFAAMDDVYQVCMPEEGFKGTGLLGH
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcgcgtacagcttgagaaagcagcctggcgctgggtcgagtcggtgagacca
gaggacatacaacgcgaacatattgagatagcttaccgaatctgtgtaccggcgtgcaag
aggggagcatgcaggaggaattgcaaagggaacccaaattgtcttgtcggtattggggaa
catgcctggttgggagagatcgacgagaacaccttccacaacattgacgatccaaactcg
gagcgccgggacaagaacacgtttgtgggtctgacaaacctgggcgccacgtgttacgtc
aacacctttctgcaggtgtggttccacaacctggagctgcgtaggaccctgtacctgtgt
cagaacaccagggcagaggagcacgacatggactcagactacgagcctcgcagcatatgt
gaacacctgcagtacctgtttgcactgctacagaacagcaacagaaggtacattgacccc
tcagggctggtcaaggctctggggctggacacaggacaacagcaggacgctcaagagttt
tccaagctcttcctctcgctattggaggacaccttatccaaacagaagaacccaaacctg
cataatgtcatccagcagcagttctgtggccagatgtcttacgtcactgtgtgtaaccag
tgtggtcgtgcttctcctctgccgtcccgattctatgaactggagctcaacatccagggc
cacaagaaccttacagaatgtgtcacagagttcctcaaggaggagaagttggatggtgac
aaccgctacttctgtgaaagctgccagagcaaacagaacgccgctcgacgcatcaaactg
cacagcctcccacgggtactcaacctgcagctcatgcggttcgttttcgacagacaaacg
ggtcacaagaagaagctcaacaccttcatcagtttcccagagcagctggacatgggcccg
tttctggaggaaaaagaagatgagaagtgtgtgtacgagctgagtgcggtcctgatccac
cgcggggtcagcgcctactcgggtcactacatcgcccacgtgcgagacgcccgcaccagc
gactggtacaagttcaacgacgaggagattgagaagatggaaggcaagaagctacagctg
ggcatcgaggaggacatcgccgagacggtgaagtcccagacccgtaagcccaagtgcagt
aaaggatatcactgctccagaaacgcctacatgctggtgtacaaatgccagagagaggag
gacactgaccccatggagaccaacgttgaggtgccaggctttctggagaggctggtggac
cgagacaacaggaagtttgaagagtggtgcctggaaatggccgacatgcgcaagcagagc
gtcgacaagggcaaggccaagcacgaagaggtgaaggaactctacgagcttttacctgcg
gaagacggccaagagtatgagtttgtgcctctggagtggctgaagaaatggctggatgac
tcgacggtcaccaaagaaatcgacaacggcaacttcctgtgttctcacggtaaactgcac
cctgacaaggtgggggaggccaagaggatctctgtcaaagctgcagagcttctctttgac
aaatatggaggaggacccaggctagatggctcaactctctgtgaggaatgtgtggggcag
agatgcagagtgctgcggctaaagaaccagctggccgaggattacaaagaagtcaccaac
cttgtcaagtgcccgcccaaaagtgatgaggggtactgggcgggcaagacgtctctgcgg
agctggagacagttggccttggagcagctggaggaggatgaggaggagaccaaacacagc
aacggcaaaaccaacggagagggaccagagatcactgctactaaagagtacggcccggag
aacctggacggagacgaggaggaaatgaaaaccttcaacgaggacatcctctgtcggcac
ggcggtctgagtatcctggagagcgagcggcggctggtgactgaggaggtgtggtccaaa
ctgagggtgtacttccccaaagccccccagttcacccagctacaggagccctgtcagcag
tgcctgaggctggagcgagaggggaaggagaatgaggctctgaacaggatgatggcatca
gaacagaagagctccctactcaacctcttccaggagaagaacaggcccacactcaccaag
tggccacaggagacagatattctctacatagttcctctgttttttgtggacgagtggaga
aggttcatcaggaggcccactaagaccaccccagtgtctagcgtagggaacagtttgctc
ctatgtccacatagaggcttcatgttcaccttcgactccatgttaaagggagacgcccaa
catatagctcttctctggcccgacgaatgggaggtgatcagcagacacttcctggttgat
cagccaatctccatctgccggatcagcgaggccacgcccaacggctccagtgtggagtac
accacccagcctgagttgtgtagggactgcagagaaggcttcattttccagcagcagagg
gacatgagagagtatgcacaagccacagtctacgtacgcaaggtcatagacgacaagagg
ttgaaggatgcagctcctgagatgaatgtgagcgggtcggaggcagaggatgagagggag
gagcctgttgctaaggtggatggagagcgagaccctgatttcagccagtcagaggacggg
gcaaagcgtcagaagctgagtgacggcaccgtcagtgctgccgcaagtcccgcccccatg
gccagtggtggcaaatcggggatcaggaggagcacgaggcacaggaagctccggggagag
aaagcactcatcgtctcagccaatcagacgctcaaggagctgaaaatacagatcatgcac
gccttctccgtggccccgtttgatcagaacctgtcgatcgacggccggtgtctcacggac
gattctgccaccctcggcagcctaggagtcatcccagagagcgtcatctgtctgaaggct
gatgaacccatagcagattttgcagcaatggatgatgtttatcaggtgtgtatgcctgaa
gaaggatttaaagggactgggcttcttggccactga
DBGET
integrated database retrieval system
