Salmo salar (Atlantic salmon): 106565153
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Entry
106565153 CDS
T04363
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04010
MAPK signaling pathway
sasa04260
Cardiac muscle contraction
sasa04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106565153
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
106565153
04261 Adrenergic signaling in cardiomyocytes
106565153
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106565153
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
106565153
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
MCP-like_PDC_1
VWA_CoxE
dCache_2
Motif
Other DBs
NCBI-GeneID:
106565153
NCBI-ProteinID:
XP_013987425
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Position
ssa12:45209906..45271140
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AA seq
1108 aa
AA seq
DB search
MLWNWRILFSHVCCASFLLFWITLGTVVEVMGSQPGIPLSVVKLWASAFGGEIKSISAKY
SGSQLLQKKYKEFEKSVRVEEIDGMKVVKTLAKKMEEMFRMKKEAMRRLVEAAEEAHLQH
EEDPELQYEYFNAVLINEVDEEGNNVELGGEFVLEPNDHFNNLSVNLSLSVVQVPTNMYN
KDPAIVNGVYWSEALNKVFVDNFEKDPSLIWQYFGSAKGFFRQYPGVKWHPDEHGVIAFD
CRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNQE
MHYVEPCLNGTLVRADRNNKAHFREHLDKLFAKGIGLLGDALTEAFTILNDFNQTGHGSV
CSQAIMLVTDGATQMYDDVFAKFNWPDRKVRIFPYLIGRESAFADNMKWMACANKGYFSQ
ISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSTVSFILSQAHKSRNKKGPSLM
TTVAMPVFSTKNETKNQGILLGVVGTDIPLQELMKIIPKHLLGIHGYAFAITNNGYILTH
PDLRPLYQEGQKRRKPNYSSVDLSEVEWEDKDDFLRNAMVNRKTGTFSMEVKKTVDKGKR
LLKMHNDYFYTEVKGTPFSVGVALSRGHGKFFFRGNVSVEAGLLDLEQPDVALADEWTYC
NTDEHHEHRSLSQIQAIKLYLTGRKPHIKCDRELIQEVLFDAVVTAPLEAYWTGLALNKS
ENSDKGVEIAYLATRTGLSRTSLFVVPEHLSNQDFLTAEDKEGVFNADHFPLWYKRAAEQ
VPGTFVYSIPFGGNENKSVVLASTAIQLLDDRKSPIVASVGIQMKLDFFQRKFWTASRQC
AALDGKCTISCDNEDIKCYLIDNNGFILVTEDYSQTGLFFGEVESAVMNKLLLMGSFKRI
TLYDYQALCREYAGSSDSARSLSHPFSMVKWLLTKLVIFLLEFNLYSWWHVDLSVKAQKS
RGKTMMVPCDTEYPAFVSERTIKETTGNIDCEGCARSFVIQQIPSSNLFMVVVDNKCDCS
SAPLVSMDPIEIMRMPWSVEEQQASLPPLQQHCSPYWPLSLAGDHTALEAHRPGPNNGPN
TGEIDRQAHHQMLTTHREPRQQEELAHN
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggaattggaggatcctcttttcacacgtgtgctgcgccagcttccttctgttc
tggattacgctgggcacggtggtagaggtgatggggtcccagccagggattcctctctca
gtggtgaagttatgggcctcagcgtttggtggagaaattaaatcaatttctgcaaaatac
tctggatcccagctgctgcagaagaaatataaagaatttgaaaagtccgtccgagtggaa
gaaattgatggcatgaaagtggtcaaaactctagcaaagaagatggaggaaatgttccgg
atgaaaaaggaggccatgcggcggctggtggaggcagcagaggaggcccatctacagcac
gaggaggacccagagctgcagtatgagtattttaacgcggtgctgatcaacgaggtggat
gaggagggcaacaacgtggagctgggaggagagttcgttctggaacccaacgaccacttc
aacaacctgtcagtcaacctcagcctcagtgtggtgcaggtgcccaccaacatgtacaac
aaagatccagccatagtgaatggggtgtattggtcagaggccttgaataaagtgtttgtg
gataactttgaaaaagacccgtccctgatatggcagtactttggcagtgccaagggcttc
tttaggcagtatcccggggtcaaatggcatccagacgaacacggggtcatcgccttcgac
tgcaggaacaggaagtggtacatccaggcagcgacgtctcctaaagacgtggtgatcctg
gtggacgttagtggcagtatgaagggcttgagactgaccatcgccagacagacggtctcc
tctatactggacacactgggagacgacgacttcttcaacatcatcgcctacaatcaggag
atgcactatgtggaaccttgtctgaacggtacactggtacgagcagacagaaataataaa
gctcatttcagagaacatctggacaagctgttcgccaaagggattggtctgctgggtgac
gctctgaccgaagcgttcaccattctaaatgattttaaccagactgggcatggcagtgtg
tgtagccaggctatcatgctggtgactgatggggcaacgcagatgtatgacgatgtcttc
gccaagttcaattggccagacagaaaggtgcgcatattcccttacctgattggccgagag
tctgcctttgctgataacatgaaatggatggcctgtgccaataaagggtatttcagtcag
atctccacactggctgacgtacaggaaaatgtgatgaggtatcttcatgttatgagtcgt
cctaaagtcatcgaccatgagcatgacacggtctggacggaggcctacgtggacagcact
gtaagtttcatactctcccaggcacacaagtccagaaacaagaagggcccgagcctgatg
accactgtggccatgcctgtgttcagcaccaagaacgagaccaagaaccagggtattctc
ctaggggtagtgggcacagacattcctcttcaggaactcatgaagatcatccctaaacac
ctgctgggtatccacggttacgcctttgccatcacaaacaacggctacatcctgacccat
ccggacctgaggccactgtaccaggagggccagaagaggaggaaacccaactacagcagt
gtggacctgtcagaagtggagtgggaggacaaggatgactttctgcgtaatgccatggtc
aacaggaagactgggacattctccatggaggtgaagaagacagtggacaaagggaaaaga
ctcctgaagatgcacaatgactatttctacactgaagtcaagggaactcccttcagcgtc
ggagtggctttgtctagaggccatggcaaattcttcttcagaggaaacgtctcagtggaa
gcagggctccttgacctggaacagccagatgttgcgctggcagatgaatggacatattgc
aacactgatgagcaccatgagcaccgctccctctcccagatccaggccattaaactctac
ctgaccggacgcaagccacacatcaaatgtgacagagagctgatccaggaggtgttgttt
gatgctgtggtcacagccccactggaggcctactggaccggcctggccctcaacaagtcc
gagaactcagacaaaggagtggagattgcttacctagccacacgcactggcctctctaga
accagcctgtttgttgtcccagagcacctatccaatcaagacttcctgacggcggaggat
aaggagggggtgttcaatgctgaccacttccctctgtggtacaagagagcagcagagcag
gttcccggcaccttcgtctactcgatcccctttggaggaaatgagaataagagtgtggtt
ttggccagcactgccatacaactgctggatgacaggaagtcgcctattgttgcttccgtt
gggattcagatgaagctggatttctttcagaggaagttctggaccgctagtagacagtgt
gctgctttggatgggaagtgcaccattagctgtgataatgaggacattaagtgttacctt
atagacaacaacggatttattctggtcacagaggactactctcagacggggctgtttttt
ggagaggtggagagtgctgttatgaacaagctgcttcttatgggctccttcaaaaggatc
actctgtatgactaccaggctctctgtagagagtatgctggcagcagtgacagcgcacgc
tctttatcacatcccttctccatggtgaaatggctcctgaccaaacttgtcattttcctg
ctggagttcaacctttacagctggtggcatgttgatctctcagtcaaagcccaaaagtcg
aggggtaagaccatgatggtgccatgtgacacggagtaccctgccttcgtctctgagcgt
accatcaaagagaccacgggaaacatcgactgtgagggctgtgccagatcttttgtaatt
cagcagattcccagcagtaatctcttcatggttgtcgtggacaacaagtgtgactgcagc
tctgcccccctggtttccatggatcccatcgagattatgagaatgccatggagtgtggag
gagcagcaggcctctctgccccccttacagcagcactgctccccctactggccactctca
ttagcaggtgaccacaccgcccttgaggcccaccgtcctggacccaacaatggacctaac
actggagagattgatagacaggcgcaccatcaaatgctgacaacgcacagggagcctcgc
caacaagaagaacttgctcacaactaa
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