Salmo salar (Atlantic salmon): 106565177
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Entry
106565177 CDS
T04363
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04010
MAPK signaling pathway
sasa04260
Cardiac muscle contraction
sasa04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106565177
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
106565177
04261 Adrenergic signaling in cardiomyocytes
106565177
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106565177
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
106565177
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
MCP-like_PDC_1
Cache_3-Cache_2
VWA_CoxE
PsbU
Motif
Other DBs
NCBI-GeneID:
106565177
NCBI-ProteinID:
XP_013987495
UniProt:
A0A1S3L9I5
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Position
ssa12:complement(44220885..44300015)
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AA seq
1097 aa
AA seq
DB search
MAICTPSCSIVCLLSFQIILIFNVQWPGADGLTFPQQYTIMHWARRIEQEIDRVFQHISG
AQQLKGIYNEKRRQFSLVKNSPYEMVEKVASDIEKLLAKKRKALDRLASEAERVQRDHPW
HDSVKEWNMTYYDSKAELDYQYSLQDGDGETVSPPLQVEFVYDPNFKNKVNYSFTAVQIP
TDIYKGAPVILNELNWTQALEKVFMENSQEDPSLLWQAFGSATGVTRYYPATPWRAPDKI
DLYDVRRRPWYIQGASSPKDMIILVDVSGSVSGLTLKLIKSSVMEMLDTLSDDDYVNVAR
FNEKAEAVVPCFKHLVQANVRNKNIFKEAVKLMQAKGTTDYKSGFHFAFNQLLNKTNVPR
AHCNKIIMLFTDGGEDRAQDIFEQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACANKGFY
FEIRSICAIRINTQEYLDVLGRPMVLAGSRAKQVQWTNVYQDALGLGLVFTGTMPVFNLT
VDGNSQNQLILGVMGVDVHLDEIKKLTPRYNLGANGYIYAIDPNGYLLLHPNLHPKLLDL
PEPVTLDFLDAEVEDSSKQEIRKHMIDGRPGDMQIKTLVKSIDERYIDEGVRSYTWTPIN
GTDYSLGLVLPPYSEYYIQADLSDVMLQLQYLQSLLPSSFESGGHVFLAPREYCKRLHIS
DNNTQFLENFLSLMVEITPESEDCDQGLIHNLILDSGIIWQLASRVWKNKDIQTYGFLAL
FAATDGGVTRVFPNSAAESWDEDPEPFNSNYYRRSLDNKGYMFRAPPRASMDDPVTSENG
TIGILVSTAVEVNLGGKNLKPAVVGVKLDLEAWVDKFKILASNVSDSRQGSQKCGPSRSC
EMDCEVNTDDLLCYLIDDGGFLVMSNQRDHWKKVGLFFGDVDPYLMHALYNNSIYARRQS
FQYQSACEPVSSSHTGAAPRGIFVPSIADMLSLAWWTSAAAWSVVQQLLYGLAYNSWLYT
GDVLADGFDQKESSCVTIQSQFYFTNTTNSYNVLQDCGNCSRLFHAKRIENTNLLFVVAE
TLPCSSCEIERLTQVKTEFQEEDPCEVLNSARYRRGPTECWDYNIWENTSECGRGHSLQS
SIGILFSIQLILTLLSL
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcgatatgcactccgtcttgcagcattgtctgcttgctatctttccagattatcttg
attttcaatgtacagtggcctggcgccgatggtctcacgttcccccagcaatacacaata
atgcactgggccaggcgcatcgagcaggagatcgacagagtcttccagcacatcagcgga
gcccagcagctaaaggggatctacaatgagaaaagaaggcagttcagcctggtaaagaat
tctccttatgagatggtggagaaggtagcttcagacatcgagaagctactggccaagaaa
cgcaaagcacttgataggctggccagtgaagcagaacgtgtccagcgagaccatccctgg
cacgacagcgtcaaggagtggaacatgacatattacgattccaaggcagagctagactat
cagtactccctgcaagatggtgatggggaaacggtgagccctccactacaggtggagttt
gtgtatgaccctaacttcaaaaataaggtcaactactccttcacagccgttcagatcccc
acagacatctacaaaggagccccagtgattctaaatgagctgaactggacccaggcgctg
gagaaggtgtttatggagaacagtcaagaggatccttcactactctggcaggcatttggt
agcgccactggggtcacccgctactacccagccacaccgtggagggcccctgataagatc
gacctttatgatgtgaggagaaggccatggtacatccaaggggcctcatcccccaaagac
atgatcatactcgttgatgtgagtggcagtgtgagcggcctcactttgaagctgatcaag
tcatcagtgatggagatgctggacactctgtctgatgacgactatgtcaacgtggccagg
tttaatgaaaaggctgaggcagtggtcccttgcttcaaacacctggtccaggccaacgtt
cgcaacaagaacatcttcaaagaggctgtaaagctcatgcaagctaaaggcaccacagac
tacaagtctggtttccactttgccttcaatcagctactaaacaagacgaatgtcccgcga
gctcactgcaataaaataatcatgctgttcactgatggaggagaggatcgagctcaggac
atctttgagcagtacaactggcccaacaaaacggtgcgggtctttacattctctgtgggg
cagcacaactatgatgtcacacccttgcagtggattgcgtgtgccaataaaggtttctat
tttgagatccgctccatctgtgccataaggattaacacccaggagtacctggatgtgctg
ggccgcccgatggtcctggcaggcagccgcgccaagcaggttcagtggaccaatgtctat
caggatgccttgggtctgggactggtttttactggaaccatgcctgtttttaatctcacc
gtggatggaaactcacagaatcagctcatattaggtgtcatgggggtggacgtgcatctg
gacgaaatcaaaaagctgacaccacgatacaaccttggtgccaatgggtacatatacgcc
atcgacccaaatggataccttctcctgcatccaaaccttcacccaaagctgctcgaccta
ccagagcctgtaacacttgacttcctggatgctgaggtggaggacagctccaaacaggaa
atccgcaaacatatgattgatggaagaccgggtgacatgcagattaagacgcttgtaaaa
tcaattgatgagcgatacatagatgagggagttcggagttacacctggacacccatcaat
ggtacagactacagtctgggcctggtactgccgccctacagtgaatactacatccaggca
gacctgagtgatgtgatgctgcagctccagtatctgcaatctttgctgcccagctccttt
gaatcagggggacacgtgttcctggctcccagggaatactgcaagcgtctgcacatctct
gacaacaacacacagttcctggagaacttcctgtctctcatggtggagatcacaccagaa
tctgaagactgtgatcaaggcctcattcacaacctgatcttggattctggaatcatctgg
cagctagcatctagagtgtggaagaacaaggatatccaaacgtatggtttcctggcatta
tttgcagccacagacggaggtgtaacccgggtcttccccaactcggctgctgagtcgtgg
gatgaggaccctgagcccttcaactctaactactaccgccgcagccttgacaacaagggc
tatatgttcagagctccacccagagcctccatggatgatccggtgacctcggagaacggc
accattggaatcctggtcagcactgccgtggaagtcaacctgggaggcaagaacctgaaa
ccggcagtggtgggggtgaagctagacttggaagcatgggtagacaagttcaagatcttg
gccagcaacgtgtctgacagtcgtcaaggctcgcaaaagtgtgggccatccagaagttgt
gagatggactgcgaagtcaacactgacgacttactctgctatctgattgacgatggtggc
ttcctggtgatgtccaaccagagggatcactggaaaaaggtgggccttttctttggtgat
gtggacccctatcttatgcacgcgctgtataacaactccatctatgcccgccggcagtcc
tttcagtaccagtcagcatgtgagccagtcagcagcagccacacaggggcagcacccagg
ggcatctttgtgccctccatcgcagacatgctcagtctggcctggtggacatcggcggca
gcatggtctgtagtccagcagctgctctatggacttgcctacaacagttggctctacaca
ggtgatgttctggcagatgggtttgaccagaaggagagcagctgtgtgaccatccaaagc
cagttctacttcaccaacaccaccaactcatacaatgtgctgcaggactgtgggaactgc
tccaggttatttcatgctaagaggatagagaacaccaacctgttgtttgtggtggctgag
acactgccctgtagctcctgtgagatcgagagactgacccaggtcaaaacggagttccag
gaggaggatccctgtgaggtgttgaactctgcacgctaccggagaggcccgaccgaatgc
tgggactacaacatctgggagaacacatcagagtgtgggagaggccattccctacaatct
tcaataggaatccttttctctatccagctgatccttactcttctctctctctga
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