KEGG   Salmo salar (Atlantic salmon): 106565193
Entry
106565193         CDS       T04363                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    106565193
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sasa01009]
    106565193
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sasa03021]
    106565193
Protein phosphatases and associated proteins [BR:sasa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106565193
Transcription machinery [BR:sasa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     106565193
    Little elongation complex (LEC)
     106565193
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 106565193
NCBI-ProteinID: XP_013987519
UniProt: A0A1S3LAL2
LinkDB
Position
ssa12:43788224..43810842
AA seq 715 aa
MLGRQRDDGGGLVKMAALSEDGRYGLNCGRRNADRVTVLHVKLTETAFRAIESHQTYKNV
PSSRPTIQFKGLQGRIKIPRTDSLDGSQNFDFYLSNVGKDNPQGSFECIQQYESSSGTPH
LVSLGTVQDKVTVCATNDSYQVTRERMAQAEEDSRKRGTKVLKPVGQFRGKRVQIRKPAP
SGSEPVAERKRSTPINPANTIRKCLANNPVSQRPYRDRLVHLLALRSYKKLELLARLQRD
GVSQKDRSSLGSTLQQVANLNPKDNSYTLKDFVYRDVQRDWPGYSEDDRVQVNGILVRKL
GLPTETLSSSSPLKDGLPASPQQKCQPELPVHFTDPLMPKKPRISHVTSQGPPVAPTPIP
TSSSRERRAPPKEDDSHHSAAATTNTKRSSLPASTTTTAGPPLNHHHLPPPSQLQVSQRP
PPSHQSGPGSNSNSPSTPEGRGTQDLPLDQSSTCLEPPSPIATSSPPSRTADRYGPCMPP
PASSSPQSNPVLTISSSSSTIIPPPSPSSSKKSKKKSKKHKEKDREKERRKDVRSSKGDG
PGVSPRGVPVVDTQRPRKRHRTKAEERRTPVIPTKSPVCPDEDTKERPVHSSDLSSTTVI
PDYISKYTAVVSMDQRQTYKDEFNAEYEEYRVLHTRVENITRRFHHLDTESRRLPPGTKE
YQEVHEEVLQEYNKMRQHSPNYQVEKQRCEYLHNKLAHIKRLIADFDQRRAQSWR
NT seq 2148 nt   +upstreamnt  +downstreamnt
atgctcggacgtcagagggacgatggtggagggctggtaaagatggcggcgctctccgag
gatgggaggtatggactgaattgtggccgacggaatgcagatcgagtcaccgtattgcac
gtaaaattgacagagacagctttcagagcaatagagagccaccaaacctataagaatgta
ccgtcctcgcggccaacaatacaattcaagggactccaagggcgtattaagatcccaagg
actgactctctggatggctctcagaactttgacttctatctgtccaacgtgggcaaggac
aaccctcagggaagctttgagtgcatccaacaatatgagtccagctcagggaccccccac
ctggtgtccttggggacggttcaggacaaagtcacggtgtgtgccaccaacgactcctac
caggtgacccgggagcgcatggcgcaggccgaggaggacagtcgcaaacgggggaccaag
gtcctcaagcctgtgggccagttcagaggtaagagagtccagatccgcaagccagcgccg
tcaggctctgaaccagtcgcggagcgcaaacgctccacccccatcaacccagccaacacc
atccgcaagtgccttgccaacaacccggtgtcccagcggccctaccgcgaccgcctcgtc
cacctgctggctctgcgctcttacaagaagctggagctactggccaggttgcaacgggac
ggggtcagccagaaggaccgcagctctctggggagcaccctgcaacaagtggccaacctg
aaccccaaagataactcttacactctgaaggattttgtgtaccgcgatgtgcagagggac
tggccgggctactccgaggatgaccgcgttcaggtcaacgggatcttggttcggaaactg
ggcctacccactgagacactttcctccagcagtcctcttaaagacggcctcccggcttcc
ccacagcagaagtgccagcccgagttgccggttcacttcaccgaccctctgatgccgaag
aagccccgcatctcccatgtcaccagccaagggccccctgtcgccccaacccccatcccc
acctcgtcctctagagagcgccgcgcccccccgaaggaggacgacagccaccacagcgcc
gctgccaccaccaacacaaagcgctcgtctctcccagccagcaccaccaccactgctggc
ccgcccctcaaccaccaccaccttccccctccctcccagctccaggtttctcaacgccct
cccccatcgcatcagtctggcccgggctccaactccaactcgcccagcacgcccgagggc
cgtggcacccaggacctgcccctggaccagagctccacctgcctggaacccccctcaccg
atagccacctccagccccccgagcaggaccgctgaccgttatggcccctgcatgccgcca
ccagccagctccagtccccaaagcaacccagtcctcaccatctcttcttcatcctccacc
attatcccccctccctcgccaagcagtagcaagaagtccaagaaaaagtcaaagaagcac
aaagagaaggaccgcgagaaggagaggcgcaaggatgtgcgaagcagtaaaggcgatggc
cctggtgtcagcccccgaggggtgccggttgtggacactcagaggcccaggaagagacac
cgcaccaaggcggaggagagacgaacgccagtcatccccaccaagagcccagtctgcccg
gacgaagacactaaagagaggccagtccactcgtcagacctatcctccaccactgtgatt
ccagattacataagtaagtacacggcagtggtgtctatggaccagaggcagacctacaag
gacgaattcaacgccgagtatgaggagtaccgcgtcctgcatacccgtgtggagaacatc
acccgccgcttccaccatctagacaccgagtccaggaggctgcctcccggcaccaaagag
taccaggaagtacatgaagaagtgttgcaggagtacaataaaatgagacaacacagccca
aactaccaggtggagaagcagcgctgcgagtacctgcacaacaagctggcccacatcaag
cgcctcatcgctgactttgaccagcgcagggcccagtcctggcgctag

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