Salmo salar (Atlantic salmon): 106565202
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Entry
106565202 CDS
T04363
Name
(RefSeq) syntaxin-18-like
KO
K08492
syntaxin 18
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04130
SNARE interactions in vesicular transport
sasa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
106565202
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106565202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106565202
Membrane trafficking [BR:
sasa04131
]
SNARE
Syntaxin (Qa)
Stx-rER
106565202
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
DUF6331
DUF4559
Motif
Other DBs
NCBI-GeneID:
106565202
NCBI-ProteinID:
XP_013987536
UniProt:
A0A1S3L997
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Position
ssa12:42997667..43013200
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AA seq
331 aa
AA seq
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MAVDITVLFKASVKTVKTRNKAMGVGFDLPKDEIFKKSRPKHGFSPKAKEVISNITKLKD
FLLQHRKDYVNAGSLISSDLTRMTDNERDQIDQDAQIFMRTCSEAIKQLRSEAEKQVIPT
QIREHRGAVLDLIEIYLRGVCKLYSEQRAIRVKRVVDKKRLSRLEPEHHHSRVAVERSSP
AVLHSEEKTAKEESSSGERSVTEVPENNVSLWEEGQGRVEDELSPEEMQMFEQENQRLVS
EMSNLVDEVRQIEGKVVEISRLQEIFAEKVLMQETEIDSIHQLVVGATENVKEGNEDIRE
AIKNNAGFRVWILFFLVMCSFSLLFLDWYDS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgatataactgtactgttcaaagctagtgtcaaaacggtaaaaacccgaaat
aaagctatgggagtagggtttgatttgcctaaagatgaaatcttcaagaagagcagaccc
aaacatggattttctcccaaggcgaaggaagtgatctccaacatcaccaagctgaaagac
tttctgctgcagcacaggaaggactatgtgaatgctggaagtctcatctcgtcagaccta
acccggatgacagacaatgagcgagaccagatcgaccaggacgcccagatcttcatgaga
acctgctctgaggccatcaagcagctccgctctgaagctgagaagcaggtcataccgaca
cagatcagagagcacaggggggcagtccttgacctcatcgagatatatttgagaggagta
tgcaagctttactccgagcagagggctatacgagtgaaaagggtggtggacaagaagaga
ctgtccagactagagccagagcaccaccacagtagggtggcggtagagagaagctcaccg
gcggtgctgcacagcgaggagaaaactgctaaggaggagagcagcagcggtgagcggagc
gtgacggaggtgccggagaacaacgtgagcctgtgggaggagggccagggccgtgtggag
gacgagctctcgcctgaggagatgcagatgtttgaacaagagaaccagaggctggtgagt
gagatgagcaacctagtagatgaagtcaggcaaatcgagggcaaggtcgtcgagatctcg
cgactccaggagatctttgcggagaaggtgctaatgcaagaaacggagatcgacagtatc
catcagctagttgtgggagccactgaaaacgttaaagagggaaacgaggacatccgagag
gccatcaaaaacaatgctggattccgtgtctggatcctcttcttccttgtcatgtgctcc
ttctctctgctcttcctggattggtatgacagctaa
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