Salmo salar (Atlantic salmon): 106565222
Help
Entry
106565222 CDS
T04363
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03015
mRNA surveillance pathway
sasa04261
Adrenergic signaling in cardiomyocytes
sasa04382
Cornified envelope formation
sasa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106565222
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106565222
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
106565222
09158 Development and regeneration
04382 Cornified envelope formation
106565222
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106565222
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106565222
03036 Chromosome and associated proteins [BR:
sasa03036
]
106565222
Protein phosphatases and associated proteins [BR:
sasa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
106565222
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
106565222
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
106565222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
106565222
NCBI-ProteinID:
XP_013987576
UniProt:
A0A1S3L9D8
LinkDB
All DBs
Position
ssa01:123247736..123260497
Genome browser
AA seq
449 aa
AA seq
DB search
MAGAGGGSNDVQWCFSQVKGAVDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEI
EQNKSQPQCRSEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKT
IKLWKISERDKQPEGYNLKEEDGRYIDPNTVTALRVPVFRPMDLMVEASPRRVFANAHTY
HINSISINSDHETYLSADDLRINLWHQEITDRSFNIVDIKPANMEELTEVITAAEFHPHQ
CNTFVYSSSKGTIRLCDMRASALCDTHSKLFEEPEDPSNRSFFSEIISSISDVKFSHNGR
YMMTRDYLSVKIWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGNDSVVM
TGSYNNFFRMFDRGQRRDVTLEASREGSKPWQVLKPRKVCADGKRKKDEISVDSLDFNKK
ILHTAWHPQDNIIAVATTNNLYIFQDKVN
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagctggaggtgggagcaatgatgtgcagtggtgcttctcacaggtgaagggg
gccgttgatgacgacgttgccgaagccgacatcatatctaccgtggagttcaaccactca
ggggagctgctagccacaggagacaagggtggcagggtcgtcatctttcagcaggaaata
gagcagaataagagtcagccacagtgccgtagtgagtacaatgtttacagtactttccag
agccatgagcccgagtttgactacttgaagagtttagagatcgaggagaagatcaacaaa
atccgctggctgccccagaagaacgcagctcagttcctgttgtccactaacgacaaaacc
ataaagttgtggaagatcagtgaacgagacaagcaaccagagggctacaacctgaaagag
gaggatggacgctacatagaccccaacactgtcactgcacttcgagtgcctgtgtttaga
cccatggacctcatggtggaagcgagccctcgcagggtgtttgccaatgcgcacacctac
cacatcaactccatctccataaacagtgaccatgagacatatctatccgcagacgacctg
cgcatcaatctctggcaccaggagatcaccgaccgcagcttcaacattgtggatataaag
ccagccaacatggaggagctgacagaggtgattacagcagctgagttccatccacaccag
tgcaacacctttgtctacagcagcagcaagggcaccatccgcctctgtgacatgagggca
tcagcactatgtgacacgcactccaaattgttcgaggagccggaagaccccagtaaccgc
tccttcttctctgagataatctcttccatctcagacgtcaagttcagccacaacgggcgc
tacatgatgacccgggactacctgtctgtcaagatttgggacctgaacatggagaacagg
cccgtggagacgtaccaggttcacgagtacctcaggagtaagctgtgctcgctctatgaa
aacgactgcatctttgacaagtttgagtgctgctggaacggaaatgacagtgtggtgatg
acgggctcatacaacaacttcttccggatgtttgaccggggccagaggcgggatgtgacc
ctggaggcgtcccgggagggcagtaagccatggcaggtcctgaagccccgcaaggtgtgt
gccgacgggaagcggaagaaggacgagatcagtgtagacagcctggacttcaacaagaaa
atcctccacactgcctggcaccctcaggacaacatcatcgccgtggcaaccaccaacaac
ctctacatattccaggacaaagtgaactag
DBGET
integrated database retrieval system
