Salmo salar (Atlantic salmon): 106565323
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Entry
106565323 CDS
T04363
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04010
MAPK signaling pathway
sasa04260
Cardiac muscle contraction
sasa04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106565323
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
106565323
04261 Adrenergic signaling in cardiomyocytes
106565323
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106565323
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
106565323
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GFIT
Motif
Pfam:
VGCC_alpha2
dCache_1
MCP-like_PDC_1
dCache_2
Motif
Other DBs
NCBI-GeneID:
106565323
NCBI-ProteinID:
XP_013987747
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Position
ssa12:complement(47932845..47946980)
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AA seq
515 aa
AA seq
DB search
MFTRNKKGPSLMTTVAMPVFSTKNETKNQGILLGVVGTDIPLQELMKIIPKHLLGIHGYA
FAITNNSYILTHPDLKPLCQLTYCNTDEHHEHRSLSQIQAIKLYLTGRKPHIKCDRELIQ
EVLFDAVVTAPLEAYWTGLALNKSENSDKGVEIAYLGTCTGLSRTSLFVVPSHLSNQDFL
MAEDKEGVFNADHFPLWYKRAAEQVPGTFVYSIPFGGNENKSVVLASTAIQLLDDRKSPI
VASVGIQMKLDFFQRKFWTASRQCAALDGKCTISCDNEDIKCYLIDNNGFILVTEDYSQT
GLFFGEVESAVMNKLLLMGSFKRITLYDYQALCREYAGSSDSARSISHPFSMVKWLLTKL
VIFLLEFNLYSWWHVDLSVKAQRSRGKIMMVPCDTEYPAFVSECTIKETTGNIDCEGCAR
TFVIQQIPSSNLFMVVVDNKCDCSSAPLVSMDPIEIMYNESLKCDRLKFQKDRKWPESCH
PFHPEENAMECGGAASLSAPLTAALLPLLATLISR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaagaaacaagaagggccctagcctgatgaccactgtggccatgcctgtgttc
agcaccaagaacgagaccaagaaccagggtattctcctaggggtagtgggcacagacatt
cctcttcaggaactcatgaagatcatccctaaacacctgctgggtatccacggttacgcc
tttgccatcacaaacaacagctacatcctgacccatccggacctgaagccactgtgtcaa
ctgacgtattgcaacactgatgagcaccatgagcaccgctccctctcccagatccaggcc
attaaactctacctgaccggacgcaagccacacatcaaatgtgacagagagctgatccag
gaggtgttgtttgatgctgtggtcacagccccactggaggcctactggaccggcctggcc
ctcaacaagtccgagaactcagacaaaggagtggagattgcttacctaggcacatgcact
ggcctctctagaaccagcctgtttgttgtcccatcgcacctatccaatcaagacttcctg
atggcagaggataaggagggggtgttcaatgctgaccacttccctctgtggtacaagaga
gcagcagagcaggttcccggcaccttcgtctactcgatcccctttggaggaaatgagaat
aagagtgtggttttggccagcactgccatacaactgctggatgacaggaagtcgcctatt
gttgcttccgttgggattcagatgaagctggatttctttcagaggaagttctggaccgct
agtagacagtgtgctgctctggatgggaagtgcaccattagctgtgataatgaggacatc
aagtgttaccttatagacaacaacggatttattctggtcacagaggactactctcagacg
gggctgttttttggagaggtggagagtgctgttatgaacaagctgcttctcatgggctcc
ttcaaaaggatcactctgtatgactaccaggctctctgtagagagtatgctggcagcagt
gacagcgcacgctctatatcacatcccttctccatggtgaaatggctcctgaccaaactt
gtcattttcctgctggagttcaacctttacagctggtggcatgttgatctctcagtcaaa
gcccaaaggtcgaggggtaagatcatgatggtgccatgtgatacggagtaccctgccttc
gtctctgagtgtaccatcaaagagaccacgggaaacatcgactgtgagggctgtgccaga
acttttgtaattcagcagattcccagcagtaatctcttcatggttgtcgtggacaacaag
tgtgactgcagctctgcccccctggtttctatggatcccatcgaaattatgtacaatgag
tctctgaaatgtgataggctgaagtttcagaaagacagaaagtggccagaatcgtgtcat
ccttttcaccccgaggagaatgccatggagtgtggaggagcagcaagcctctctgccccc
cttacagcagcactgctccccctactggccactctcattagcaggtga
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