Salmo salar (Atlantic salmon): 106565325
Help
Entry
106565325 CDS
T04363
Name
(RefSeq) lumican-like
KO
K08122
lumican
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sasa00535
]
106565325
Proteoglycans [BR:
sasa00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
106565325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
Motif
Other DBs
NCBI-GeneID:
106565325
NCBI-ProteinID:
XP_013987771
UniProt:
A0A1S3L9Y0
LinkDB
All DBs
Position
ssa12:47972931..47985945
Genome browser
AA seq
405 aa
AA seq
DB search
MCVCTATNVRRANSCLNASAVLRLSYSISMAVQVSVLSLVLTLALGLMLSVCRPVCGTPE
TSQDLDYGGVPLWINRLLGEPSVFSLRGRMDRAWYRANNPKSCPDLCDCPIQWPSALYCD
HRDLGELPDNMLYNTQYLFLQGNNISSLPSSSLTNSSGLLWLILDDNRLQTDGLQTSTLQ
NLTRLQYLFLNHNKLTVVPSGLPRSLRQLRLAHNLITSISPGTFGNLHNLTLLLLQGNRL
NVITETDFTGLVSLNLLNLSGNLFSSVPSHLPPSIQQLYLSNNSLSGLGEESLQGFTNLR
YLRLSRCGLVSPSLHPQSFNLSSLVELDLSYNKLTTIPLVPLTLQYLYLEANHIQEFNIS
SFCREVGPLSYSRMRILRLDGNKMSYHLLPPEWVYCLRVLHHIYI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtctgcacagcaacaaatgtcaggagggcaaactcatgcctcaatgcctcagct
gtattaaggttgtcttacagtatttccatggctgtacaagtgtcggtgctgtccctagtc
ctcactctagccctgggcctgatgctgagtgtctgtaggcctgtgtgtggcaccccagag
acatcccaggacctggactatggaggggttcctctctggatcaaccgtcttctgggggaa
ccctccgtattcagcctgaggggccgaatggaccgggcatggtacagagccaacaacccc
aagtcctgccctgacctgtgtgactgtcctatccagtggccctcagctctgtactgtgac
cacagagacctgggagagctgccagacaacatgctttacaatacacaatacctgttcctg
cagggcaacaacatctcgtccctgccctcctcctctctcaccaactcctcaggacttctc
tggctcatcctggatgataaccgtctacagacggacgggctgcagacctccacgctgcag
aacctgacccggctccaatacctgttcctcaaccacaacaagctgactgtcgtgccctct
ggcctgcccaggagcctgcggcagctccgactggcacacaacctcatcaccagcatctcc
ccgggaacctttgggaacttacataatcttacattgctgctactgcaggggaataggttg
aacgtgattacagagactgacttcacaggcctggtgtctcttaacctgttgaacctgagc
gggaacctcttctcctctgtcccctcccaccttcctccctccatccagcagctctacctc
tccaacaactctctgtctggcctgggggaggaaagtttacagggcttcactaatctcagg
tacctgcgtctgagccgctgtggtctagtgagcccttccctccacccacagtccttcaac
ctgtcttcccttgtggagctggatctctcttacaacaagctgacaaccatcccactggtt
cccctcacactacagtacctatacttggaggccaaccacatacaagagtttaacatctct
agtttctgtcgggaggtgggtcctctgtcgtactccaggatgaggatccttcggctggac
ggcaacaagatgtcctatcacctactaccacctgaatgggtctactgcctccgagtcctg
caccacatatacatctaa
DBGET
integrated database retrieval system