KEGG   Salmo salar (Atlantic salmon): 106565364
Entry
106565364         CDS       T04363                                 
Symbol
ccdc36
Name
(RefSeq) coiled-coil domain containing 36
  KO
K26085  interactor of HORMAD1 protein 1
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sasa03036]
    106565364 (ccdc36)
Chromosome and associated proteins [BR:sasa03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    106565364 (ccdc36)
SSDB
Motif
Pfam: IHO1 DUF5129 Serine_rich IFT57 CoV_S2 Sec8_N DUF1664 TMPIT
Other DBs
NCBI-GeneID: 106565364
NCBI-ProteinID: XP_013987858
UniProt: A0A1S3LA63
LinkDB
Position
ssa12:50349691..50353748
AA seq 635 aa
MNPNVWNIKEILSIPTGSIVPKITSRNGATSDYSSLTDSQFLFGSQFWPENSQGMSQDMG
FSNRISGSSQSQEASEPKILSNYHSKPFLFGDGKDKMKVPSFTSGKAIGILDRFEEDKKK
AKEKCESDILTSGFLQFREKLEHIKLSVNHIDESTTTGNKDFADFAKTLQQNIASLQDGF
AQQFEALLNKVSSQNQMLKEMEDRVAKTGVATTALSSHMQGLQENLEVLRHEQSRDQSML
GEALSLLSTLISQHGSEPLHTPVRVTESTVQTSPGLVERFCLVSEEKRYFEGVRLCAATA
VTAPRKAVASCGVGETGGEAAGRLHPADRGTRGGPSETCDQGQAAAPRALYPPAMMGEVE
EDQLERCSQMVLDEPAKTSWQGVYPHPTRSTAVTHGPGRGATALHYPMQGLQDPSTSGGA
PALQFPMQGFQDSSRAYALLQDLTIRSTRTIMNPHCDPEQSSQPDHSEPAAVPSESPRGR
STMAGRRFTQRGQGQRKQPFRSRRRALMPPQTRSNGRLVGRGGDENRQPLQNQRKQGAGS
TGKEQHDPNRMEMDTLIPEAQKRHQDKEKKSNKATGGSRNPFSLWSQESNSSVYGSTGNN
ARPAWEKTPSPPEPQAVSERNRGLWQLFDMNDDSD
NT seq 1908 nt   +upstreamnt  +downstreamnt
atgaatcccaacgtgtggaatatcaaagagattttaagcatcccaactggatccattgtg
cccaagatcaccagcaggaatggggctaccagtgactactccagtttgacagactcacaa
ttcctgtttggatcccagttttggcctgaaaactctcagggcatgtcacaggacatgggc
ttttcaaacagaatatccggtagctcacagtcacaggaggcaagtgagccaaagatttta
agcaattaccattccaaaccattcctgttcggagacggaaaggacaaaatgaaggtgcca
agctttacaagtggcaaagcaattggcatactggacaggtttgaagaggacaagaaaaag
gcaaaagaaaagtgtgagagtgacattctcacctctggatttctacaatttcgtgaaaaa
cttgaacatattaagctctctgtaaatcacattgatgagagcactacaacaggcaacaaa
gattttgcagattttgcaaagacattgcagcaaaacatagccagtctgcaggatggcttt
gcacagcagtttgaggccttgctgaataaagtgagctcacagaatcagatgctgaaagag
atggaggacagagtagccaagacgggtgtggcgactacagcactcagctcccacatgcag
ggcctgcaggagaatctggaggtcctgagacatgagcagagccgagatcaaagcatgtta
ggagaagccctgtcccttctaagcaccttgatttctcagcacgggtccgaacccctccac
acacctgtcagggtgacagaaagcacggtccagacatccccaggactggtagagaggttc
tgcctggtgagtgaggagaagaggtactttgaaggtgtacgtctctgcgctgcgacagcg
gtcactgcgcctcgtaaagcagtggcatcatgtggtgtaggggagactggaggagaggca
gcagggcggctgcaccctgcagatagaggaaccagaggaggaccctcagagacatgtgac
cagggccaggccgcagcccccagagctctgtaccctcctgcgatgatgggggaggtggag
gaggatcagttggagcggtgtagccagatggtactggatgagccggctaagacttcctgg
cagggggtgtacccacaccccacacgctctaccgctgtgactcatggaccaggaagaggt
gccacagccctacactatcctatgcagggcctacaagaccccagcacatcggggggcgct
ccagctctacagttccccatgcagggttttcaggactccagcagggcctacgcgcttcta
caagatttgaccattaggagcacccgcacaatcatgaacccccactgcgacccggagcag
agcagccagcctgaccacagtgagcctgcagcggtcccatcagagagccccaggggcagg
agcaccatggctggacgtaggttcacccagagaggccagggacagaggaaacagcccttc
agaagcaggaggagggcactaatgccaccacagaccaggagtaacggtcgattagtgggc
aggggtggagatgagaaccgacagcccctccaaaaccaaaggaagcagggagctggatcg
actggcaaggagcagcatgatcccaacaggatggaaatggacacactcataccagaagct
cagaaacgacatcaggacaaagagaagaagtctaacaaagccactggaggctcccgcaac
cctttcagcttgtggtcccaggaaagtaacagctctgtgtacgggtccacagggaacaat
gccaggcccgcctgggaaaagacaccatcgccacctgagccccaggctgtctcagagaga
aacagaggcttatggcagctgtttgacatgaacgatgattctgactga

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