Salmo salar (Atlantic salmon): 106565364
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Entry
106565364 CDS
T04363
Symbol
ccdc36
Name
(RefSeq) coiled-coil domain containing 36
KO
K26085
interactor of HORMAD1 protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106565364 (ccdc36)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
106565364 (ccdc36)
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Gene cluster
GFIT
Motif
Pfam:
IHO1
DUF5129
Serine_rich
IFT57
CoV_S2
Sec8_N
DUF1664
TMPIT
Motif
Other DBs
NCBI-GeneID:
106565364
NCBI-ProteinID:
XP_013987858
UniProt:
A0A1S3LA63
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Position
ssa12:50349691..50353748
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AA seq
635 aa
AA seq
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MNPNVWNIKEILSIPTGSIVPKITSRNGATSDYSSLTDSQFLFGSQFWPENSQGMSQDMG
FSNRISGSSQSQEASEPKILSNYHSKPFLFGDGKDKMKVPSFTSGKAIGILDRFEEDKKK
AKEKCESDILTSGFLQFREKLEHIKLSVNHIDESTTTGNKDFADFAKTLQQNIASLQDGF
AQQFEALLNKVSSQNQMLKEMEDRVAKTGVATTALSSHMQGLQENLEVLRHEQSRDQSML
GEALSLLSTLISQHGSEPLHTPVRVTESTVQTSPGLVERFCLVSEEKRYFEGVRLCAATA
VTAPRKAVASCGVGETGGEAAGRLHPADRGTRGGPSETCDQGQAAAPRALYPPAMMGEVE
EDQLERCSQMVLDEPAKTSWQGVYPHPTRSTAVTHGPGRGATALHYPMQGLQDPSTSGGA
PALQFPMQGFQDSSRAYALLQDLTIRSTRTIMNPHCDPEQSSQPDHSEPAAVPSESPRGR
STMAGRRFTQRGQGQRKQPFRSRRRALMPPQTRSNGRLVGRGGDENRQPLQNQRKQGAGS
TGKEQHDPNRMEMDTLIPEAQKRHQDKEKKSNKATGGSRNPFSLWSQESNSSVYGSTGNN
ARPAWEKTPSPPEPQAVSERNRGLWQLFDMNDDSD
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccaacgtgtggaatatcaaagagattttaagcatcccaactggatccattgtg
cccaagatcaccagcaggaatggggctaccagtgactactccagtttgacagactcacaa
ttcctgtttggatcccagttttggcctgaaaactctcagggcatgtcacaggacatgggc
ttttcaaacagaatatccggtagctcacagtcacaggaggcaagtgagccaaagatttta
agcaattaccattccaaaccattcctgttcggagacggaaaggacaaaatgaaggtgcca
agctttacaagtggcaaagcaattggcatactggacaggtttgaagaggacaagaaaaag
gcaaaagaaaagtgtgagagtgacattctcacctctggatttctacaatttcgtgaaaaa
cttgaacatattaagctctctgtaaatcacattgatgagagcactacaacaggcaacaaa
gattttgcagattttgcaaagacattgcagcaaaacatagccagtctgcaggatggcttt
gcacagcagtttgaggccttgctgaataaagtgagctcacagaatcagatgctgaaagag
atggaggacagagtagccaagacgggtgtggcgactacagcactcagctcccacatgcag
ggcctgcaggagaatctggaggtcctgagacatgagcagagccgagatcaaagcatgtta
ggagaagccctgtcccttctaagcaccttgatttctcagcacgggtccgaacccctccac
acacctgtcagggtgacagaaagcacggtccagacatccccaggactggtagagaggttc
tgcctggtgagtgaggagaagaggtactttgaaggtgtacgtctctgcgctgcgacagcg
gtcactgcgcctcgtaaagcagtggcatcatgtggtgtaggggagactggaggagaggca
gcagggcggctgcaccctgcagatagaggaaccagaggaggaccctcagagacatgtgac
cagggccaggccgcagcccccagagctctgtaccctcctgcgatgatgggggaggtggag
gaggatcagttggagcggtgtagccagatggtactggatgagccggctaagacttcctgg
cagggggtgtacccacaccccacacgctctaccgctgtgactcatggaccaggaagaggt
gccacagccctacactatcctatgcagggcctacaagaccccagcacatcggggggcgct
ccagctctacagttccccatgcagggttttcaggactccagcagggcctacgcgcttcta
caagatttgaccattaggagcacccgcacaatcatgaacccccactgcgacccggagcag
agcagccagcctgaccacagtgagcctgcagcggtcccatcagagagccccaggggcagg
agcaccatggctggacgtaggttcacccagagaggccagggacagaggaaacagcccttc
agaagcaggaggagggcactaatgccaccacagaccaggagtaacggtcgattagtgggc
aggggtggagatgagaaccgacagcccctccaaaaccaaaggaagcagggagctggatcg
actggcaaggagcagcatgatcccaacaggatggaaatggacacactcataccagaagct
cagaaacgacatcaggacaaagagaagaagtctaacaaagccactggaggctcccgcaac
cctttcagcttgtggtcccaggaaagtaacagctctgtgtacgggtccacagggaacaat
gccaggcccgcctgggaaaagacaccatcgccacctgagccccaggctgtctcagagaga
aacagaggcttatggcagctgtttgacatgaacgatgattctgactga
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