Salmo salar (Atlantic salmon): 106565395
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Entry
106565395 CDS
T04363
Name
(RefSeq) transcription factor SOX-4-like
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106565395
Transcription factors [BR:
sasa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106565395
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Rox3
SOG2
Motif
Other DBs
NCBI-GeneID:
106565395
NCBI-ProteinID:
XP_013987934
UniProt:
A0A1S3LBS2
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Position
ssa12:52077963..52084651
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AA seq
397 aa
AA seq
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MTPAVTLSRASSSIMVQQRGHKYLAVMDSDLSQEVFVGLGADEGEEVFGPSPSNKDPNWC
KTPTGHIKRPMNAFMVWSQIERRKIMEQWPDMHNAEISKRLGKRWKLLPDYEKIPFIKEA
ERLRLKHMADYPDYKYRPRKKSKSSMPVRVGEKVPLKTGKSHTGGRASASATSTATSKGL
KVRTPSSKHRASFHGNKFKGYDEGISDDDTVDVEMASQGASQPGGQRPALGVFHHQQAAL
TPGEQQPHLTAQLRVKLPTTTSHQPTSTLPVGLSSGSPVPQSLPESSPRVSSSSESRTPL
SSTGRSSTPTSTSSSSFVSSASSDEELDEEILHIISNANFDSMPMDCATLDKDFDAAFHT
NSGSHFDFPDYCTPEVNEMISGDLLVPSISDLVFKIY
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgactccagccgtcactctgagtagagcatcatcctccatcatggtacagcaaagggga
cacaaatacttagcagttatggacagtgatttgagccaagaggttttcgtaggactggga
gcagatgaaggggaggaggtttttggaccgtcgccctccaacaaagaccccaactggtgc
aagactcccacgggtcacatcaagcggcccatgaatgcattcatggtctggtcgcaaatc
gagagacggaagatcatggagcagtggccagatatgcataacgcagagatctccaaacgc
ctaggcaagcgctggaaactcctccccgactacgagaagatccccttcatcaaagaagcg
gagagacttcggctaaagcacatggccgattaccccgactacaagtaccggccccggaag
aagagcaagagctccatgcctgtgcgggtcggggaaaaggtccccctgaagacaggcaag
tcccacacgggtggtcgtgcatctgcttccgcaacctccacagccaccagcaaagggctc
aaggtccgaacgccttcctccaaacacagagccagcttccacggcaataagttcaaaggt
tacgacgagggcatcagcgatgacgacacagtggatgtagagatggccagtcagggagca
agccagccaggagggcagaggccagccttgggcgtcttccaccaccagcaggctgccttg
acccctggggagcagcagcctcatctcacagcccagctcagagtgaaattgcccaccacc
acctcccaccagcccacctccaccctccctgtgggcctctcctctgggtctcctgtaccc
cagagcctcccagagtcatcccccagggtgtcctcttcatcggagtcccgtacgcccctc
tcctccaccggccgctcctccacccccacctccaccagctcctcctcattcgtgtcgtcg
gcctcctccgacgaggagctggacgaggagatcttgcatatcatctccaacgccaacttc
gacagcatgcctatggattgcgccactctggacaaagactttgacgctgcgtttcacacc
aactcaggatcccacttcgatttccctgactactgcaccccagaagtgaatgagatgata
tccggggacttgctggtgcccagtatctctgatctggtgttcaagatctactga
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