Salmo salar (Atlantic salmon): 106565398
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Entry
106565398 CDS
T04363
Name
(RefSeq) TBC1 domain family member 20-like
KO
K20372
TBC1 domain family member 20
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106565398
Membrane trafficking [BR:
sasa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
106565398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
DUF3325
Motif
Other DBs
NCBI-GeneID:
106565398
NCBI-ProteinID:
XP_013987940
UniProt:
A0A1S3LAT1
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Position
ssa12:complement(52188344..52201949)
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AA seq
402 aa
AA seq
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MKRSRSVGASSPLNGIGKQDGDSRRKRKLAEISQALNVTPVDVAVLRRMAISEGGLLTDE
IRCKVWPRLLNVPTDILPEKLEEVERENNKDYNQVLLDVQRSLRRFPPGMPDEQRESLQE
ELIDIILRVLGRNTQLHYYQGYHDIVVTFLLVLGERLATALVEKLSTHHLRDFMDPTMDN
TKHILNYLMPIIERVNPEVHDFMQQAEVGTIFALSWLITWFGHVLSDFRHVVRLYDFFLA
CHPLMPIYFAAVIVQYREDEVLDCECDMASVHHLLSQIPQDLPYETLISRAGDLFVQFPP
SELAREAAQQYSQQMAASTFKDFDLTPEQQQPDTVLRRRRREKQALKGAAAGAMVATAQP
TAARRFVRLAVMGLTVALGAAALTLVNTALEWAPKLDLHLFP
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatctagaagtgttggtgcgtcttcacctttgaatgggattggaaaacaagat
ggggactcccggaggaagaggaagttggcagagatctctcaggccctgaacgtgacgcca
gttgatgtggcagtgctgaggaggatggccatcagcgagggggggctgctcactgatgag
atccgctgtaaagtgtggccacggctgctcaacgtgcccaccgacatcctgcctgagaaa
ctagaggaagtagagcgggagaataataaggactataaccaggtgctgttggatgtccag
cgttccctgagaagattccctcctggcatgccagacgagcagcgtgagagcctccaggag
gagttgattgacatcatcctgcgggtgctgggaaggaacactcagctgcactactaccag
ggctaccatgacatcgtggtcaccttcctgctggtgctgggcgagcggcttgctaccgct
ctggtggagaaactctccacgcaccaccttagggactttatggaccccaccatggacaac
actaaacacatccttaactatctgatgccaatcatcgagagggtcaatccagaggtgcat
gacttcatgcagcaggcggaggtgggcaccatctttgcccttagctggctcatcacctgg
tttggccatgtcctgtcagatttccgacacgtcgtgcggttgtatgacttcttcctggcc
tgccatcccctgatgccaatctactttgctgctgtgattgtgcagtaccgggaggatgag
gtgttggactgtgagtgtgacatggcatcggtgcaccacctcctgtcccagatcccccag
gacctgccctacgagacgctcatcagccgcgcaggagacctctttgtccagttccccccc
tccgagctggccagggaggctgcccagcagtacagtcaacagatggcagcctccaccttt
aaagactttgatctgaccccggagcagcagcagccggacacggtgctgcggaggcggcgg
agagagaagcaggcgctgaagggagctgctgcaggtgctatggtggcgaccgcccaaccc
accgcggctcggcgcttcgtccgactggccgtcatggggctcactgtggccctgggggca
gccgccctaaccctggtcaacacggccctagagtgggcgcccaaactggacctacacctc
tttccctga
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