Salmo salar (Atlantic salmon): 106565406
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Entry
106565406 CDS
T04363
Name
(RefSeq) nuclear receptor subfamily 4 group A member 1-like
KO
K04465
nuclear receptor subfamily 4 group A member 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106565406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106565406
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sasa03310
]
106565406
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
106565406
Nuclear receptors [BR:
sasa03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
106565406
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
106565406
NCBI-ProteinID:
XP_013987977
UniProt:
A0A1S3LAJ6
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Position
ssa12:complement(52412072..52437985)
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AA seq
589 aa
AA seq
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MPCVQTQYGTVPYDNNYYSSEFLNPELSAKLTMDIGAERDQLTASSLPSINTLVGSGYVG
EFDTYSCQITTSASTAPSSHSAGSASSPQAQHSAFKLDDIQVYSCYPGSFALSYLDETLS
SCGSDYYGSPASAAPSPPTPGFQSQPGPVWDSPFSPYSPDPGCWVADKSSLAQQPSFFTF
IPTTEQHSPLGQHQGPQQSEEDPFFQPSQRHASQLHYAPLSLDQGSMDSPGLMERPMLSP
KTGSPGANEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKDCPVDKRR
RNRCQFCRFQKCLGVGMVKEVVRTDSLKGRRGRLPSKSKTVLESVSTTPPVNIIASLVRA
HIDSNPAIGKLDYSKYQETVASLSEKEDANDIQQFYDLLTGTMDVIRKWAETIPEFTAFC
PEDQELLLESAFVELFILRLAYRSSPEKDKLIFCNGVVLHRMQCVRGFGDWIDSILDFSQ
SLHRMNLDVSSFACLAALVIITDRHGLKEPKRVEEFQNCLITCLRDHVSSSGSDAGRPQP
NFLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIVDKIFMDTLPF
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtgttcaaactcagtatggaactgtgccctacgacaacaactactacagctct
gagttcctgaaccccgaactcagtgctaagctgaccatggacattggtgctgagcgggac
cagctcaccgcctcctccctccccagcatcaacaccctggtgggcagcggctatgtgggc
gagtttgacacctactcctgccagatcaccacctccgcctccaccgccccctccagccac
tcagccggcagcgcctccagccctcaggctcagcactcagcctttaaactggacgacatc
caggtatacagctgctacccgggctccttcgccctcagctacctcgacgagacgctgtcc
tcctgcggctccgattactatggcagccccgcatcagccgccccctccccacccaccccg
ggcttccagagccagcctggcccagtctgggactcacccttcagcccctattccccagac
cctgggtgctgggtggccgataagtcaagcctggctcagcaaccctccttcttcaccttc
atccccaccacagagcagcactcccccctggggcagcaccagggcccccagcagagtgag
gaggaccctttcttccagccctcccagaggcatgcttcccagctccattatgcccccttg
tccctagaccagggatccatggacagccccgggctcatggagaggcccatgttgtcccct
aagaccggcagccccggggccaacgagggtcgctgtgcggtgtgtggggacaacgcctcc
tgtcagcactacggggtccgcacctgtgagggctgcaagggcttctttaagcgaactgta
cagaagaatgctaaatatgtgtgcctagccaacaaagactgtccagtagacaagcggcga
aggaaccgctgccaattctgccgtttccagaagtgcctgggggtgggaatggtgaaggaa
gtcgtccgcacagacagcctgaaaggtcgcaggggtcgtctgccctctaaatccaagaca
gtgctagagtcagtgtccaccaccccacccgtcaacatcatcgcctctcttgtcagggct
cacatagactccaaccccgccatcggaaagctggactactccaagtaccaggagacagtg
gccagcctatcagagaaagaggatgccaatgacatccagcagttctacgacctgctgaca
ggcaccatggatgtgattcggaaatgggccgagaccatcccagaattcaccgccttctgc
ccggaagaccaggagctgctcctggaatctgctttcgtggaactctttatcctccggcta
gcatacaggtcgagtcctgagaaagacaagctgatcttctgcaacggcgtggtacttcac
cgtatgcagtgtgtgcgaggctttggcgactggatcgactccatcctggacttctcccag
agcctccaccgcatgaacctggacgtgtcctcattcgcctgccttgcagcactcgtcatc
atcacagatcgccatggccttaaagagcccaaacgggtggaggagttccagaactgcctc
atcacctgtctgagggaccatgtgtccagcagtggctccgatgcggggaggccccagccc
aacttcctgtcccgactactggggaagctccctgagctgcgcaccctctgcacccagggc
ctgcagcgcatcttctacctgaagctggaggacctggttcccccaccgcccattgtagac
aaaatcttcatggataccttacctttctga
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