Salmo salar (Atlantic salmon): 106565425
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Entry
106565425 CDS
T04363
Symbol
NELFD, TH1-like, th1l
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106565425 (NELFD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106565425 (NELFD)
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
106565425 (NELFD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
DUF4817
Motif
Other DBs
NCBI-GeneID:
106565425
NCBI-ProteinID:
XP_013988017
UniProt:
B5X201
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All DBs
Position
ssa12:52815027..52820410
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AA seq
579 aa
AA seq
DB search
MDEEYYERNIGDWDGPDGNQDDYVEGENDGKVQEDCLQKFSSRDYIMEPAVFNTLKTYFQ
AGGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLATLLDGGEDNLEKNLPEFAKMVCHGEHTYLFAQAMMSIMSQE
EQGGSAMRRIGQEVQKSAHQRGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWK
KNKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAELSTLYQCIRFPVVAMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLIKLFETEHSQLDVMEQME
LKKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQ
LFLPILENDSIAGTIRTEGEHDPVAEFIAHCKSNFIMMN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaatattacgaaaggaatattggcgactgggatggtccggatggcaatcag
gacgactatgttgaaggggagaacgatgggaaagttcaggaggactgcctacagaagttc
tccagcagagattacatcatggagcctgctgtcttcaacaccctcaaaacatatttccag
gctggtggctcccctgaacatgtcatccagctcctgtcagagaactactctgctgtggca
cagactgtcaacctgctggcagagtggctcatccagatgggtgtagagccagctcaggtg
caggagcgggtagagaatcacttgaaaagtctcctgatcaagcactttgacccccagaag
gcagactccatttttactgtagagggagagactcctgcttggctggaacagatgatcgcc
cacaccacctggagagaccttttctacaagctggccgaggcccaccctgactgtctgatg
ctcaacttcactgttaagctcatctcagatgcgggctaccagggggagatcaccagtgtg
tcgacggcgtgccagcagctggaggtgttctccagggtcctgaggacctctctggccacg
ctgctggatggaggagaggacaacctagagaagaacctgccagaatttgctaagatggtg
tgtcacggggagcacacatacctgtttgcccaggccatgatgtccatcatgtctcaggag
gagcagggggggtcggccatgcgcaggatcggccaggaagtacagaagtctgcacatcag
aggggccacgatgccagtcagatcactctggcattgggcacagcagcagcctaccctcga
gcctgccaggccctgggcgcaatgctgtccaaaggtgcactcaaccctgccgacatcact
gtgctcttcaagatgttcagcagcatggacccgcctcccgtagagctgatccgagtacct
gcgttcctcgacctgttcatgcagtcgctgttcaagccgggctcaaagatcaaccaggac
cataaacacaaatacattcacatcctggcctatgctgccagtgtggttgaaacatggaaa
aagaacaagcgagtgaacatcaacaaggacgagctcaaatccacctccaaggccattgag
acggtccataacctgtgttgcaatgagaataaaggcgccacagaactggtggctgagctc
agcaccctgtaccagtgcatccggttcccagttgttgccatgggggtactgaagtgggtt
gattggacggtctctgagccccgctatttccagctccagacagaccacacccctgtccac
ctagcacttttggacgagatcagcacctgtcaccagcttctgcacccacaggtcctccag
ctactgatcaagctctttgagaccgaacactcccagctcgatgtcatggagcagatggag
ctgaagaagaccctgttggaccgtatggtccacctgctgagtcgaggctacgtgctgcct
gtggtcggatacatccgcaagtgcctggagaagctcaacacagacatctctctcattcgc
tactttgtaacggaggtgttggatgtgattgcccctccgtacacgtcagactttgtccag
ctgttcctgcccatcctggagaacgacagcatcgctggcacaatacgcacagagggagaa
cacgatcctgttgctgagtttatagctcactgcaaatccaacttcatcatgatgaactga
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