Salmo salar (Atlantic salmon): 106565455
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Entry
106565455 CDS
T04363
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106565455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106565455
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106565455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
106565455
NCBI-ProteinID:
XP_013988085
UniProt:
A0A1S3LAU6
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Position
ssa12:53936627..53969644
Genome browser
AA seq
741 aa
AA seq
DB search
MSHLPSSSVRDHMKWAGLLGCEAVLSSMALMQASSMAGPPKKMMAPLGHGPPPQRDGLDR
GPQSHMILPSGMSCPPLLIRKEADFHAPRLLDEKEMRANEDMQLKKKNRKSGTPCKVREQ
DGRGGKVVVVDENGNCPISKVQKNFICDHCYGAFRSGYHLKRHILIHTGEKPYACGICDM
RFIQRYHLERHSLIHTGVKPYACSMCDMRFFQRYHLERHSLTHTGVKPFACNMCDMRFFQ
RYHLARHSLTHTGVKPYACSMCDQRFFQRYHLARHSLKHTGVKPYACSMCDMRFYQRYHL
SRHSLTHTGVKPYACSMCDMRFIQRYQLERHSLTHTGVKPFGCTMCDKRFFQRYHLARHS
LTHMGVKPYACTMCDKRFFQRDHLRRHSVTHMAVKPFACTLCDKRFFERHHLRRHSITHM
GVKPFACTMCDKRFFERHHLRRHSITHMGVKPFACTMCDKRFYQRHHLRRHSITHMGVKP
YACTMCDKRFYQRHHLARHSVTHMGVKPYACTMCDKRFYQRHHLARHNVTHMGVKPYGCT
MCDKRFYQRYLLARHSLTHLGVKPYGCTMCDKRFYQRYHLSRHSLTHLGVKPYACTMCDM
RFVQRYHLTRHSLTHTGVKPYACSMCDMRFIQRNHLERHSLTHTGEKPFACDMCDMRFIQ
RYHLERHKRVHSGEKPYQCERCQQNFSRTDRLLRHRRLCQGRGVAKVENQPCCEPRPYSQ
EPPPAPPTWSPLHPPPGRLAV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacctgcccagcagctcagtccgcgaccatatgaaatgggcggggttgcttggc
tgtgaggctgttctctccagtatggccctgatgcaggccagctccatggccggtccgccc
aagaagatgatggctccactcggccatggtccaccgccccagagggatggtttagaccgc
ggtcctcagagccacatgatcctgccatctggaatgagctgtccacccctgcttatccgg
aaggaggctgacttccacgccccccgcctgctggacgagaaggagatgagggccaacgag
gacatgcagctgaaaaagaagaacaggaagtcaggaacgccctgtaaagtgagagagcaa
gacgggaggggagggaaggtggttgttgtggatgagaatggtaactgtccaatatccaaa
gtgcagaaaaacttcatctgtgatcactgttacggagcatttaggagtggatatcacctg
aagagacacatcctcattcatacaggggagaagccgtatgcttgtggcatatgtgacatg
aggtttattcagcgttaccatctggagagacacagcctcattcacacgggggtgaagccg
tacgcttgttccatgtgtgacatgaggtttttccagcgttaccacctggagagacacagc
ctcactcatacgggggtgaagccgtttgcttgcaacatgtgtgacatgagattcttccag
cgttaccacctggcgagacacagcctcactcatacgggggtgaagccatacgcttgctcc
atgtgtgatcaaagatttttccagcgttaccacctggcaagacacagcctcaaacatacg
ggggtgaagccgtacgcttgctccatgtgtgacatgaggttctaccagcgttaccacctg
tcgagacacagcctcactcatacgggagtgaagccatatgcttgttccatgtgtgacatg
aggtttattcagcgttaccaactggagagacacagcctcactcatacgggggtgaagcca
tttggttgcaccatgtgtgacaagaggttcttccagcgctaccacctggcaagacacagc
ctcactcatatgggggtgaagccgtatgcttgcaccatgtgtgacaagaggtttttccag
cgagaccatctacggagacacagcgtcactcatatggcggtgaagccgttcgcttgcacc
ttgtgtgacaagaggttttttgagcgccaccacctgcggagacacagcatcactcatatg
ggggtgaagccgttcgcttgcaccatgtgtgacaagaggttttttgagcgccaccacctg
cggagacacagcatcactcatatgggggtgaagccgttcgcttgcaccatgtgtgacaag
cggttttaccagcgccaccacctgcggagacacagcatcactcatatgggggtgaagccg
tacgcttgcaccatgtgtgacaagaggttttaccagcgccaccacctggcgagacacagc
gtcactcacatgggagtgaagccgtatgcttgcaccatgtgtgacaagaggttttatcag
cgccaccacctggcgagacacaacgtcactcacatgggagtgaagccgtacggttgcacc
atgtgtgacaagaggttttaccagcgttacctcctggcgagacacagcctcactcatttg
ggggtgaagccgtacggttgcaccatgtgtgacaagaggttttaccagcgataccacctc
tcaagacacagcctcactcatttgggtgtgaaaccttacgcttgtaccatgtgtgacatg
aggtttgttcagcgctaccacctgacaagacacagcctcactcacacgggggtgaagccg
tatgcttgttccatgtgtgacatgaggtttatacagcgtaaccacctggagagacacagc
ctcactcatacgggggagaagccgtttgcttgtgacatgtgtgacatgaggtttatccag
cgttaccatctggagagacacaagcgtgtccacagcggagagaagccttatcagtgtgag
cgctgccagcagaacttctcgcggacggaccggctgcttcgacatcgacggctgtgccag
ggccggggtgtggccaaggtggagaaccagccgtgctgcgagccccgcccttactcccag
gagcccccgcccgctccaccaacttggagccccctgcacccccctcctggtcggctggct
gtctga
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