Salmo salar (Atlantic salmon): 106565473
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Entry
106565473 CDS
T04363
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04020
Calcium signaling pathway
sasa04080
Neuroactive ligand-receptor interaction
sasa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
106565473
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106565473
04082 Neuroactive ligand signaling
106565473
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106565473
Ion channels [BR:
sasa04040
]
Ligand-gated channels
Glutamate (ionotropic)
106565473
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
106565473
NCBI-ProteinID:
XP_013988168
UniProt:
A0A1S3LB35
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Position
ssa01:124686508..124726110
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AA seq
972 aa
AA seq
DB search
MRLFLLAVFLSCSCARGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQIYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPKGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNNQRKIIWPGGETEKPRGFQMSTRLKIVT
IHQEPFVYVKPTEQDGTCKEEKTLNGVADIKKVICTGPNETIPGNTTGRPIVPQCCYGFC
IDLLIKLAGTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDSKEASGSQAVGASMT
PSLPSSSLETQDDRKSGRAEPPDPKKKASFRSISTSLASSIKRRRSSKDTQYPPTDITGQ
LNLSDPSVSTVV
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttctgctggcggtgttcctctcgtgctcctgtgcgcggggcggctgcgag
ccgaagatagtgaacatcggagcagtcctgagtcagaagaggtacgagcaagtctttaag
gatgcggtgacccaggcgaatcagatctacgggagagataaattcaagttgaccgccatc
tccgtaacgcacaaacccaacgctatccagatggctctctccgtctgcgaggacctcatc
tctaaccaggtgtatgccatcctagtgagtcatcctccccagtccaatgaccacctcacc
cccacgcctgtgtcctacaccgcaggcttctaccgcatccctgtggtgggcctcaccacg
cgcatgtccatctactccgacaagagtatccacttgtcctttctgcggactgtccccccg
tactcccaccaggctcacgtgtggttcgacatgatgcgagagtttcgatggaaccacatc
atcctgattgtcagcgatgaccacgaggggcgggccgcgcagaagagactggagacccta
ctggaggagagggaaacaaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctccagttcagccaggagactaac
ttaactgctctgcttctggaagccaaagagctggaggctcgtgtcatcatcctctccgcc
agtgaagaggacgctgctgcagtttacaaggctgcccgtttcctcaacatgacgggctcg
ggttacgtgtggctggtgggagagcgggagatgtcgggtaaagccctgagtgaggcacca
gatggtctcatcggcctccagctcatcaacggcaagaacgagtcggcccacatcaacgac
gcagtggcagtggtggctcagtccatccaggagctctttgagaaggagaacatcacggag
ccgcccaaaggctgtgtgggaaacaccaacatctggaagaccgggcccctcttcaaaagg
gttctgatgtcatcaaagtacccagagggcctcactggacgtgtggagttcaatgatgat
ggcgacaggaagtatgctcactacagcattctcaactaccagaagagtcgactcattcaa
gttgggatttacaatggaacacaggtggtgatgaataatcagaggaagatcatctggccg
gggggagagacagagaaaccgcggggctttcagatgtccacaagactaaagatagtgacc
atacaccaggagccttttgtgtatgtgaagcccactgagcaggatggaacctgcaaggag
gaaaaaacattaaatggagtggcagatattaaaaaggtgatctgcactggaccaaatgag
accatcccaggtaacacaacaggacgtccaattgtacctcaatgttgttatggattctgt
atcgatctacttatcaagttggccggaaccatgaactttacctatgaggtgcacctggtg
gctgatgggaaatttggaacacaggagcgggtgaacaacagcaacaagaaagagtggaat
ggcatgatgggagagctcctggggggtctggcagatatgatcgttgccccgctgacgata
aacaacgaacgagcccagtacattgaattctccaaaccttttaagtaccaaggactaacc
atcctcgttaaaaaggaaatccctcgcagtacactggactcgttcatgcagccgtttcag
agcacactgtggctgctggtgggtctttcggtgcatgtggtggcggtgatgctttaccta
ctagaccggttcagcccgtttgggaggtttaaagtaaacagtgaagaagaagaagaagac
gccctcaccttgtcgtcagccatgtggttctcctggggagttttgcttaactccggtatt
ggggaaggcgcgccgcgcagcttctcagcgagaatcttgggcatggtgtgggccggcttt
gccatgatcatagtggcatcgtatactgccaacctggcagccttcctggtgctggaccgg
cctgaggagcgcatcaccggcatcaacgacccgaggctgaggaacccatcagacaagttc
atctacgccactgtgaagcagagctctgtggacatctacttccggcggcaggtggagctt
agcaccatgtaccgccacatggagaagcacaactacgagagtgccgctgaggctatccag
gccgtgcgcgacaacaagctgcatgctttcatctgggactctgcggtgctggagtttgaa
gcctcgcagaagtgcgacctggtgaccacgggagagctgtttttccgttcgggctttggc
ataggcatgcgcaaggacagcccctggaaacagaatgtgtccctggccattctcagttcc
catgagaatggcttcatggaagatctagataaaacctgggtgagataccaggagtgtgac
tcacggagcaatgccccagccacactcacctttgagaacatggcaggagtgttcatgctg
gtggctggaggcatagcagcagggatcttcctcatctttattgagatcgcctacaagcgg
cacaaagacgcccgcaggaagcagatgcagctggcctttgcggccgtcaacgtctggagg
aagaacctgcaggacagtaaggaggcctctgggagccaagctgtgggcgcatcgatgact
ccatcgttaccctcttcctctctagagactcaggatgataggaaaagtggtagagcagag
ccccccgaccccaaaaagaaagcctcttttaggtccatcagtacctccctggcctccagc
atcaagagacgtaggtcgtccaaagacacgcagtacccacccaccgacatcacgggccag
ctcaacttgtccgacccatctgtcagcacagtggtgtga
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