Salmo salar (Atlantic salmon): 106565477
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Entry
106565477 CDS
T04363
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106565477
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
106565477
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Gene cluster
GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
YabA
ApbA
DUF5365
Motif
Other DBs
NCBI-GeneID:
106565477
NCBI-ProteinID:
XP_013988174
UniProt:
A0A1S3LCG9
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Position
ssa12:55294911..55299027
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AA seq
425 aa
AA seq
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MEMERIPSAQPTTKHQQAELSDMQGMDFPMYVYKSRRGMKRGDDSKETYKLPHRLIEKKR
RDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTTLLENQQQKILSLQNG
MQIEQSSSSQENSEEVFRSGFHVCAKEVLQYLVNQEGHGDLTSSHMVNHMHKVSAEVLQG
PPRSPCKPRPEETTSHYQHHQAHREKPAGQPPKPSEGHGKNCVPVIQRRYAHAGGEQSGS
DTDTDSGYGGEQVEHLASHAGYYGQEKQLKRALGEKRASFCIKQEDEPCHKRSRVESSED
ESLSGGESSSSSSSGHGSYMSAYSPHQAQPHPLCMPFYLIPPSAAAYLPMLEKCWYSGAM
PMIYPGLGGSAQGMPSDRHAPSPSIMMSPRGRSPSPPTVAQSPMDSPAFLQVLKQVLPMN
LETKD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaaaggattccaagtgcgcaacccaccaccaagcaccagcaggctgagctg
tctgacatgcaagggatggatttccctatgtatgtatacaaatcccgtcggggaatgaaa
cgaggagatgacagcaaggaaacctacaaactgcctcatcgacttatcgagaagaaaagg
cgtgacaggataaacgagtgcatcgctcagttgaaagatttattgcccgagcacctgaaa
cttacaactcttggccatctggagaaggctgtggttttggagctcacgctcaagcatgtg
aaagctctaaccactctactggaaaaccagcagcagaaaatcctcagtctgcagaatggc
atgcaaatcgagcagtcctcttccagccaggagaacagtgaggaggtcttccgctcaggc
ttccatgtctgtgccaaggaggtgctgcagtacctggtcaaccaggagggtcacggtgac
cttacatcctcccacatggtcaaccacatgcacaaggtgtccgctgaggtcctccagggt
cctccccgtagcccctgcaaaccccggcctgaagagaccaccagccactaccaacatcat
caggcccacagggagaagcctgcaggccagccccccaagcccagtgaaggccatgggaag
aactgcgttcccgtcatccagcggaggtatgcccatgcgggaggcgagcagagcggcagt
gatacagacacagacagcggctacggtggcgagcaggttgagcatctggcatcgcatgca
gggtactacggccaggagaaacagctgaagagggcgctgggcgaaaagagggcgtcattt
tgcattaagcaggaagatgagccgtgccacaaacgcagccgggtcgagtcatccgaggac
gagtctctctcgggcggagagtcatcctcatcgtcctccagcggccacggcagctacatg
agcgcctactcccctcaccaggcccaacctcatcccctctgcatgcccttctacctcatc
cccccctctgccgcagcctatctgcccatgctggagaagtgctggtactcaggggccatg
cccatgatttaccctggcctggggggctccgcgcagggtatgcctagtgacaggcatgcc
ccctctccctcgatcatgatgtcccccagggggcgctctccctctccccccaccgtagcc
caaagccccatggactccccagccttcctccaagtgttaaagcaggtacttcccatgaac
ctggaaaccaaagactga
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